Structural, Spectroscopic, and Computational Insights from Canavanine-Bound and Two Catalytically Compromised Variants of the Ethylene-Forming Enzyme.


Journal

Biochemistry
ISSN: 1520-4995
Titre abrégé: Biochemistry
Pays: United States
ID NLM: 0370623

Informations de publication

Date de publication:
16 Apr 2024
Historique:
medline: 17 4 2024
pubmed: 5 4 2024
entrez: 5 4 2024
Statut: ppublish

Résumé

The ethylene-forming enzyme (EFE) is an Fe(II), 2-oxoglutarate (2OG), and l-arginine (l-Arg)-dependent oxygenase that either forms ethylene and three CO

Identifiants

pubmed: 38577885
doi: 10.1021/acs.biochem.4c00031
pmc: PMC11025135
doi:

Substances chimiques

ethylene forming enzyme EC 4.-
Canavanine 3HZV514J4B
Ferrous Compounds 0
Alanine OF5P57N2ZX
Ketoglutaric Acids 0
Lyases EC 4.-

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

1038-1050

Références

J Chem Phys. 2009 Jun 21;130(23):234101
pubmed: 19548705
Biochem Biophys Res Commun. 2020 Mar 26;524(1):268-271
pubmed: 31983433
Proc Natl Acad Sci U S A. 2017 May 2;114(18):4667-4672
pubmed: 28420789
Nat Rev Chem. 2023 Aug;7(8):536-547
pubmed: 37225920
J Chem Theory Comput. 2015 Aug 11;11(8):3696-713
pubmed: 26574453
Chemistry. 2022 Mar 28;28(18):e202104106
pubmed: 34986268
J Am Chem Soc. 2019 Dec 18;141(50):19585-19588
pubmed: 31790588
Bioinformatics. 2006 Nov 1;22(21):2695-6
pubmed: 16940322
J Am Chem Soc. 2024 Jan 24;146(3):1977-1983
pubmed: 38226594
Biochem Biophys Res Commun. 1992 Oct 30;188(2):483-9
pubmed: 1445291
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21
pubmed: 20124702
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):271-81
pubmed: 21460445
Acta Crystallogr D Biol Crystallogr. 2013 Jul;69(Pt 7):1204-14
pubmed: 23793146
J Am Chem Soc. 2017 Aug 30;139(34):11980-11988
pubmed: 28780854
Acc Chem Res. 2015 Feb 17;48(2):482-9
pubmed: 25565178
Chem Rev. 2019 Aug 28;119(16):9478-9508
pubmed: 31244000
Proc Natl Acad Sci U S A. 2005 May 10;102(19):6679-85
pubmed: 15870208
Science. 2021 Sep 24;373(6562):1489-1493
pubmed: 34385355
Biotechnol Biofuels. 2016 Jan 04;9:3
pubmed: 26734073
J Comput Chem. 2004 Jul 15;25(9):1157-74
pubmed: 15116359
Chemistry. 2020 Apr 24;26(24):5308-5327
pubmed: 31804749
Mol Biosyst. 2009 Dec;5(12):1606-16
pubmed: 20023721
J Chem Inf Model. 2016 Apr 25;56(4):599-604
pubmed: 26913476
Biochemistry. 2016 Nov 1;55(43):5989-5999
pubmed: 27749027
Phys Chem Chem Phys. 2019 May 15;21(19):9957-9968
pubmed: 31041955
Nat Commun. 2021 Aug 26;12(1):5150
pubmed: 34446715
J Am Chem Soc. 2013 Jul 3;135(26):9665-74
pubmed: 23742069
J Am Chem Soc. 2016 Mar 16;138(10):3403-9
pubmed: 26927977
J Chem Theory Comput. 2013 Jul 9;9(7):3084-95
pubmed: 26583988
J Am Chem Soc. 2003 Apr 2;125(13):3745-50
pubmed: 12656604
Nat Struct Biol. 2002 Sep;9(9):646-52
pubmed: 12198485
RSC Chem Biol. 2023 Jul 10;4(9):635-646
pubmed: 37654506
Chem Soc Rev. 2014 Jul 21;43(14):5051-66
pubmed: 24709805
Biochemistry. 2001 Jan 30;40(4):867-75
pubmed: 11170407
J Chem Theory Comput. 2012 Sep 11;8(9):3314-21
pubmed: 26605738
Sci Adv. 2021 Aug 20;7(34):
pubmed: 34417180
Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501
pubmed: 20383002
Phys Chem Chem Phys. 2021 Jan 21;23(2):777-784
pubmed: 33355572
J Am Chem Soc. 2021 Feb 10;143(5):2293-2303
pubmed: 33522811
Chem Rev. 2022 Jul 27;122(14):11900-11973
pubmed: 35849738
J Am Chem Soc. 2019 Jul 3;141(26):10431-10439
pubmed: 31199129
Chem Rev. 2006 May;106(5):1589-615
pubmed: 16683746

Auteurs

Shramana Chatterjee (S)

Department of Microbiology, Genetics, and Immunology, Michigan State University, East Lansing, Michigan 48824, United States.

Matthias Fellner (M)

Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824, United States.

JoelA Rankin (J)

Department of Microbiology, Genetics, and Immunology, Michigan State University, East Lansing, Michigan 48824, United States.
Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824, United States.

Midhun G Thomas (MG)

Department of Chemistry, Michigan Technological University, Houghton, Michigan 49931, United States.

Simahudeen Bathir J S Rifayee (SB)

Department of Chemistry, Michigan Technological University, Houghton, Michigan 49931, United States.

Christo Z Christov (CZ)

Department of Chemistry, Michigan Technological University, Houghton, Michigan 49931, United States.

Jian Hu (J)

Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824, United States.
Department of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States.

Robert P Hausinger (RP)

Department of Microbiology, Genetics, and Immunology, Michigan State University, East Lansing, Michigan 48824, United States.
Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824, United States.

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