Functions and mechanisms of A-to-I RNA editing in filamentous ascomycetes.


Journal

PLoS pathogens
ISSN: 1553-7374
Titre abrégé: PLoS Pathog
Pays: United States
ID NLM: 101238921

Informations de publication

Date de publication:
Jun 2024
Historique:
medline: 6 6 2024
pubmed: 6 6 2024
entrez: 6 6 2024
Statut: epublish

Résumé

Although lack of ADAR (adenosine deaminase acting on RNA) orthologs, genome-wide A-to-I editing occurs specifically during sexual reproduction in a number of filamentous ascomycetes, including Fusarium graminearum and Neurospora crassa. Unlike ADAR-mediated editing in animals, fungal A-to-I editing has a strong preference for hairpin loops and U at -1 position, which leads to frequent editing of UAG and UAA stop codons. Majority of RNA editing events in fungi are in the coding region and cause amino acid changes. Some of these editing events have been experimentally characterized for providing heterozygote and adaptive advantages in F. graminearum. Recent studies showed that FgTad2 and FgTad3, 2 ADAT (adenosine deaminase acting on tRNA) enzymes that normally catalyze the editing of A34 in the anticodon of tRNA during vegetative growth mediate A-to-I mRNA editing during sexual reproduction. Stage specificity of RNA editing is conferred by stage-specific expression of short transcript isoforms of FgTAD2 and FgTAD3 as well as cofactors such as AME1 and FIP5 that facilitate the editing of mRNA in perithecia. Taken together, fungal A-to-I RNA editing during sexual reproduction is catalyzed by ADATs and it has the same sequence and structural preferences with editing of A34 in tRNA.

Identifiants

pubmed: 38843141
doi: 10.1371/journal.ppat.1012238
pii: PPATHOGENS-D-24-00464
doi:

Substances chimiques

Adenosine Deaminase EC 3.5.4.4
Fungal Proteins 0
RNA, Fungal 0
Adenosine K72T3FS567
Inosine 5A614L51CT

Types de publication

Journal Article Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

e1012238

Informations de copyright

Copyright: © 2024 Wang et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

Auteurs

Zeyi Wang (Z)

Department of Botany and Plant Pathology, Purdue University, West Lafayette, Indiana, United States of America.

Zhuyun Bian (Z)

Department of Botany and Plant Pathology, Purdue University, West Lafayette, Indiana, United States of America.

Diwen Wang (D)

Department of Botany and Plant Pathology, Purdue University, West Lafayette, Indiana, United States of America.

JinRong Xu (J)

Department of Botany and Plant Pathology, Purdue University, West Lafayette, Indiana, United States of America.

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Classifications MeSH