Structure and fragmentation chemistry of the peptide radical cations of glycylphenylalanylglycine (GFG).


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2024
Historique:
received: 07 06 2024
accepted: 18 07 2024
medline: 13 8 2024
pubmed: 13 8 2024
entrez: 13 8 2024
Statut: epublish

Résumé

Herein, we explore the generation and characterization of the radical cations of glycylphenylalanylglycine, or [GFG]•+, formed via dissociative electron-transfer reaction from the tripeptide to copper(II) within a ternary complex. A comprehensive investigation employing isotopic labeling, infrared multiple-photon dissociation (IRMPD) spectroscopy, and density functional theory (DFT) calculations elucidated the details and energetics in formation of the peptide radical cations as well as their dissociation products. Unlike conventional aromatic-containing peptide radical cations that primarily form canonical π-radicals, our findings reveal that 75% of the population of the experimentally produced [GFG]•+ precursors are [GFα•G]+, where the radical resides on the middle α-carbon of the phenylalanyl residue. This unexpected isomeric ion has an enthalpy of 6.8 kcal/mol above the global minimum, which has an N-terminal captodative structure, [Gα•FG]+, comprising 25% of the population. The [b₂-H]•+ product ions are also present in a ratio of 75/25 from [GFα•G]+/ [Gα•FG]+, the results of which are obtained from matches between the IRMPD action spectrum and predicted IR absorption spectra of the [b₂-H]•+ candidate structures, as well as from IRMPD isomer population analyses.

Identifiants

pubmed: 39137228
doi: 10.1371/journal.pone.0308164
pii: PONE-D-24-23178
doi:

Substances chimiques

Cations 0
Free Radicals 0
Copper 789U1901C5
Peptides 0
Oligopeptides 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0308164

Informations de copyright

Copyright: © 2024 Li et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

Auteurs

Yinan Li (Y)

Department of Chemistry, University of Hong Kong, Hong Kong, China.

Justin Kai-Chi Lau (JK)

Department of Chemistry, York University, Toronto, ON, Canada.
Department of Chemistry and Biochemistry, University of Windsor, Windsor, ON, Canada.

Teun van Wieringen (T)

FELIX Laboratory, Institute for Molecules and Materials, Radboud University, Nijmegen, The Netherlands.

Jonathan Martens (J)

FELIX Laboratory, Institute for Molecules and Materials, Radboud University, Nijmegen, The Netherlands.

Giel Berden (G)

FELIX Laboratory, Institute for Molecules and Materials, Radboud University, Nijmegen, The Netherlands.

Jos Oomens (J)

FELIX Laboratory, Institute for Molecules and Materials, Radboud University, Nijmegen, The Netherlands.

Alan C Hopkinson (AC)

Department of Chemistry, York University, Toronto, ON, Canada.

K W Michael Siu (KWM)

Department of Chemistry, York University, Toronto, ON, Canada.
Department of Chemistry and Biochemistry, University of Windsor, Windsor, ON, Canada.
Center for Mass Spectrometry Research and Clinical Application, Shandong Public Health Clinical Center Affiliated to Shandong University, Jinan, Shandong, China.

Ivan K Chu (IK)

Department of Chemistry, University of Hong Kong, Hong Kong, China.
Center for Mass Spectrometry Research and Clinical Application, Shandong Public Health Clinical Center Affiliated to Shandong University, Jinan, Shandong, China.

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Classifications MeSH