A Public Mid-Density Genotyping Platform for Hexaploid Sweetpotato (

Ipomoea batatas / genetics Plant Breeding / methods Polyploidy Genotyping Techniques / methods Genotype Genome, Plant Genetic Markers / genetics
DArTag genotyping amplicon-sequencing microhaplotype plant breeding sweetpotato

Journal

Genes
ISSN: 2073-4425
Titre abrégé: Genes (Basel)
Pays: Switzerland
ID NLM: 101551097

Informations de publication

Date de publication:
09 Aug 2024
Historique:
received: 15 04 2024
revised: 24 07 2024
accepted: 07 08 2024
medline: 31 8 2024
pubmed: 31 8 2024
entrez: 29 8 2024
Statut: epublish

Résumé

Small public breeding programs focused on specialty crops have many barriers to adopting technology, particularly creating and using genetic marker panels for genomic-based decisions in selection. Here, we report the creation of a DArTag panel of 3120 loci distributed across the sweetpotato (

Identifiants

DOI: 10.3390/genes15081047 PMID: 39202407
pubmed: 39202407
pii: genes15081047
doi: 10.3390/genes15081047
pii:
doi:

Substances chimiques

Genetic Markers 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Agricultural Research Service
ID : 8062-21000-043-004-A
Organisme : Agricultural Research Service
ID : 8062-21000-052-002-A
Organisme : Agricultural Research Service
ID : 8062-21000-052-003-A
Organisme : National Institute of Food and Agriculture
ID : 2022-67013-36269

Auteurs

Dongyan Zhao (D)

Breeding Insight, Cornell University, 525 Tower Rd, Ithaca, NY 14853, USA.
ORCID: 0000-0002-2080-8416

Alexander M Sandercock (AM)

Breeding Insight, Cornell University, 525 Tower Rd, Ithaca, NY 14853, USA.
ORCID: 0000-0001-6897-1856

Maria Katherine Mejia-Guerra (MK)

Breeding Insight, Cornell University, 525 Tower Rd, Ithaca, NY 14853, USA.

Marcelo Mollinari (M)

Bioinformatics Research Center, North Carolina State University, Campus Box 7609, Raleigh, NC 27695, USA.
ORCID: 0000-0002-7001-8498

Kasia Heller-Uszynska (K)

Diversity Arrays Technology, Canberra, ACT 2617, Australia.

Phillip A Wadl (PA)

US Vegetable Laboratory, United States Department of Agriculture, Agricultural Research Service, Charleston, SC 24914, USA.

Seymour A Webster (SA)

Department of Plant, Soil Sciences and Engineering, College of Agriculture, Science, and Education (CASE), Port Antonio P.O. Box 170, Portland, Jamaica.

Craig T Beil (CT)

Breeding Insight, Cornell University, 525 Tower Rd, Ithaca, NY 14853, USA.
ORCID: 0000-0002-1756-9987

Moira J Sheehan (MJ)

Breeding Insight, Cornell University, 525 Tower Rd, Ithaca, NY 14853, USA.
ORCID: 0000-0002-3400-2165

Articles similaires

Comprehensive comparative analysis and development of molecular markers for Lasianthus species based on complete chloroplast genome sequences.

Yue Zhang, Meifang Song, Deying Tang et al.
1.00
Genome, Chloroplast Phylogeny Genetic Markers Base Composition High-Throughput Nucleotide Sequencing

Planting density effect on poplar growth traits and soil nutrient availability, and response of microbial community, assembly and function.

Rongye Qiao, Zhen Song, Yinglong Chen et al.
1.00
Populus Soil Microbiology Soil Microbiota Fungi

Exploring the complexity of genome size reduction in angiosperms.

Akihiro Ezoe, Motoaki Seki
1.00
Genome Size Genome, Plant Magnoliopsida Evolution, Molecular Arabidopsis

Expression interplay of genes coding for calcium-binding proteins and transcription factors during the osmotic phase provides insights on salt stress response mechanisms in bread wheat.

Diana Duarte-Delgado, Inci Vogt, Said Dadshani et al.
1.00
Triticum Transcription Factors Gene Expression Regulation, Plant Plant Proteins Salt Stress

Classifications MeSH

questionsmedicales.fr › Eucaryotes › Viridiplantae › Streptophyta › Embryophyta › Tracheobionta › Magnoliopsida › Convolvulaceae › Ipomoea › Ipomoea batatas › A Public Mid-Density Genotyping Platform for...
questionsmedicales.fr › Technologie, industrie et agriculture › Agriculture › Production végétale › Amélioration des plantes › A Public Mid-Density Genotyping Platform for...
questionsmedicales.fr › Phénomènes génétiques › Ploïdies › Polyploïdie › A Public Mid-Density Genotyping Platform for...
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Techniques de génotypage › A Public Mid-Density Genotyping Platform for...
questionsmedicales.fr › Phénomènes génétiques › Génotype › A Public Mid-Density Genotyping Platform for...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Génome végétal › A Public Mid-Density Genotyping Platform for...
questionsmedicales.fr › Phénomènes génétiques › Phénotype › Marqueurs génétiques › A Public Mid-Density Genotyping Platform for...