Covariation of hot spring geochemistry with microbial genomic diversity, function, and evolution.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
29 Aug 2024
Historique:
received: 22 11 2023
accepted: 20 08 2024
medline: 1 9 2024
pubmed: 1 9 2024
entrez: 29 8 2024
Statut: epublish

Résumé

The geosphere and the microbial biosphere have co-evolved for ~3.8 Ga, with many lines of evidence suggesting a hydrothermal habitat for life's origin. However, the extent that contemporary thermophiles and their hydrothermal habitats reflect those that likely existed on early Earth remains unknown. To address this knowledge gap, 64 geochemical analytes were measured and 1022 metagenome-assembled-genomes (MAGs) were generated from 34 chemosynthetic high-temperature springs in Yellowstone National Park and analysed alongside 444 MAGs from 35 published metagenomes. We used these data to evaluate co-variation in MAG taxonomy, metabolism, and phylogeny as a function of hot spring geochemistry. We found that cohorts of MAGs and their functions are discretely distributed across pH gradients that reflect different geochemical provinces. Acidic or circumneutral/alkaline springs harbor MAGs that branched later and are enriched in sulfur- and arsenic-based O

Identifiants

pubmed: 39209850
doi: 10.1038/s41467-024-51841-5
pii: 10.1038/s41467-024-51841-5
pmc: PMC11362583
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

7506

Subventions

Organisme : National Aeronautics and Space Administration (NASA)
ID : 80NSSC19M0150
Organisme : National Aeronautics and Space Administration (NASA)
ID : 80NSSC19M0150
Organisme : National Aeronautics and Space Administration (NASA)
ID : 80NSSC19M0150
Organisme : National Aeronautics and Space Administration (NASA)
ID : 4069947046
Organisme : National Aeronautics and Space Administration (NASA)
ID : 4069947046
Organisme : National Aeronautics and Space Administration (NASA)
ID : 4069947046
Organisme : National Aeronautics and Space Administration (NASA)
ID : 4069947046

Informations de copyright

© 2024. The Author(s).

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Auteurs

Daniel R Colman (DR)

Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA. daniel.colman@montana.edu.

Lisa M Keller (LM)

Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.

Emilia Arteaga-Pozo (E)

Department of Chemistry and Geochemistry, Montana Technological University, Butte, MT, USA.

Eva Andrade-Barahona (E)

Department of Chemistry and Geochemistry, Montana Technological University, Butte, MT, USA.

Brian St Clair (B)

Department of Chemistry and Geochemistry, Montana Technological University, Butte, MT, USA.

Anna Shoemaker (A)

Department of Earth Sciences, Montana State University, Bozeman, MT, USA.

Alysia Cox (A)

Department of Chemistry and Geochemistry, Montana Technological University, Butte, MT, USA.

Eric S Boyd (ES)

Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA. eric.boyd@montana.edu.

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Classifications MeSH