In Silico Insights Reveal Fibronectin 1 as a Theranostic Marker in Gastric Cancer.


Journal

International journal of molecular sciences
ISSN: 1422-0067
Titre abrégé: Int J Mol Sci
Pays: Switzerland
ID NLM: 101092791

Informations de publication

Date de publication:
16 Oct 2024
Historique:
received: 28 09 2024
revised: 09 10 2024
accepted: 10 10 2024
medline: 26 10 2024
pubmed: 26 10 2024
entrez: 26 10 2024
Statut: epublish

Résumé

Gastric cancer (GC) is a complex and highly variable disease, ranking among the top five cancers diagnosed globally, and a leading cause of cancer-related deaths. Emerging from stomach lining cells amid chronic inflammation, it often advances to preneoplastic stages. Late-stage diagnoses and treatment challenges highlight the critical need for early detection and innovative biomarkers, motivating this study's focus on identifying theranostic markers through gene ontology analysis. By exploring deregulated biological processes, this study aims to uncover insights into cancer progression and associated markers, potentially identifying novel theranostic candidates in GC. Using public data from The Human Protein Atlas, this study pinpointed 299 prognostic genes, delineating 171 with unfavorable prognosis and 128 with favorable prognosis. Functional enrichment and protein-protein interaction analyses, supported by RNAseq results and conducted via Metascape and Cytoscape, highlighted five genes (

Identifiants

pubmed: 39456895
pii: ijms252011113
doi: 10.3390/ijms252011113
pii:
doi:

Substances chimiques

Biomarkers, Tumor 0
Fibronectins 0
FN1 protein, human 0
Thrombospondin 1 0
thrombospondin-1, human 0
Cadherins 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Fondo Nacional de Desarrollo Científico y Tecnológico
ID : 1210440
Organisme : Fondo de Fomento al Desarrollo Científico y Tecnológico FONDEF
ID : ID21I10027
Organisme : Instituto Milenio en Inmunología e Inmunoterapia
ID : ICN09_016/ICN 2021_045; former P09/016-F
Organisme : Agencia Nacional de Investigación y Desarrollo
ID : scholarship 242230375
Organisme : DIUFRO
ID : DI24-49

Auteurs

Tatiana Millapán (T)

Laboratory of Integrative Biology (LIBi), Centro de Excelencia en Medicina Traslacional (CEMT), Scientific and Technological Bioresource Nucleus (BIOREN), Universidad de La Frontera, Temuco 4810296, Chile.
Millennium Institute on Immunology and Immunotherapy, Santiago 8331150, Chile.

Álvaro Gutiérrez (Á)

Laboratory of Integrative Biology (LIBi), Centro de Excelencia en Medicina Traslacional (CEMT), Scientific and Technological Bioresource Nucleus (BIOREN), Universidad de La Frontera, Temuco 4810296, Chile.
Millennium Institute on Immunology and Immunotherapy, Santiago 8331150, Chile.
Doctoral Program in Sciences with a Specialization in Applied Cellular and Molecular Biology, Universidad de La Frontera, Temuco 4810296, Chile.

Krisnna Rosas (K)

Laboratory of Integrative Biology (LIBi), Centro de Excelencia en Medicina Traslacional (CEMT), Scientific and Technological Bioresource Nucleus (BIOREN), Universidad de La Frontera, Temuco 4810296, Chile.
Biotechnology Engineering Program, Universidad de La Frontera, Temuco 4810296, Chile.

Kurt Buchegger (K)

Laboratory of Integrative Biology (LIBi), Centro de Excelencia en Medicina Traslacional (CEMT), Scientific and Technological Bioresource Nucleus (BIOREN), Universidad de La Frontera, Temuco 4810296, Chile.
Millennium Institute on Immunology and Immunotherapy, Santiago 8331150, Chile.
BMRC, Biomedical Research Consortium, Santiago 8331150, Chile.
Department of Basic Sciences, Faculty of Medicine, Universidad de La Frontera, Temuco 4810296, Chile.

Carmen Gloria Ili (CG)

Laboratory of Integrative Biology (LIBi), Centro de Excelencia en Medicina Traslacional (CEMT), Scientific and Technological Bioresource Nucleus (BIOREN), Universidad de La Frontera, Temuco 4810296, Chile.
Millennium Institute on Immunology and Immunotherapy, Santiago 8331150, Chile.
BMRC, Biomedical Research Consortium, Santiago 8331150, Chile.

Priscilla Brebi (P)

Laboratory of Integrative Biology (LIBi), Centro de Excelencia en Medicina Traslacional (CEMT), Scientific and Technological Bioresource Nucleus (BIOREN), Universidad de La Frontera, Temuco 4810296, Chile.
Millennium Institute on Immunology and Immunotherapy, Santiago 8331150, Chile.
BMRC, Biomedical Research Consortium, Santiago 8331150, Chile.

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Classifications MeSH