Dominic Waithe

Affiliations

Wolfson Imaging Center & MRC WIMM Centre for Computational Biology MRC Weather all Institute of Molecular Medicine University of Oxford, Oxford, United Kingdom.

Publications (15)

CytoCensus, mapping cell identity and division in tissues and organs using machine learning.

eLife

Avec: Martin Hailstone , Dominic Waithe , Tamsin J Samuels , Lu Yang , Ita Costello , Yoav Arava , Elizabeth Robertson , Richard M Parton , Ilan Davis

Hypoxia Regulates Endogenous Double-Stranded RNA Production

Frontiers in oncology

Avec: Esther Arnaiz , Ana Miar , Antonio Gregorio Dias Junior , Naveen Prasad , Ulrike Schulze , Dominic Waithe , James A Nathan , Jan Rehwinkel , Adrian L Harris

Molecular recognition of the native HIV-1 MPER revealed by STED microscopy of single virions.

Nature communications

Avec: Pablo Carravilla , Jakub Chojnacki , Edurne Rujas , Sara Insausti , Eneko Largo , Dominic Waithe , Beatriz Apellaniz , Taylor Sicard , Jean-Philippe Julien , Christian Eggeling , José L Nieva

Oxidation of Protein Kinase A Regulatory Subunit PKARIα Protects Against Myocardial Ischemia-Reperfusion Injury by Inhibiting Lysosomal-Triggered Calcium Release.

Circulation

Avec: Jillian N Simon , Besarte Vrellaku , Stefania Monterisi , Sandy M Chu , Nadiia Rawlings , Oliver Lomas , Gerard A Marchal , Dominic Waithe , Fahima Syeda , Parag R Gajendragadkar , Raja Jayaram , Rana Sayeed , Keith M Channon , Larissa Fabritz , Pawel Swietach , Manuela Zaccolo , Philip Eaton , Barbara Casadei

Diffusion and interaction dynamics of the cytosolic peroxisomal import receptor PEX5.

Biophysical reports

Avec: S Galiani , K Reglinski , P Carravilla , A Barbotin , I Urbančič , J Ott , J Sehr , E Sezgin , F Schneider , D Waithe , P Hublitz , W Schliebs , R Erdmann , C Eggeling

Proof-of-concept clinical trial of etokimab shows a key role for IL-33 in atopic dermatitis pathogenesis.

Science translational medicine

Avec: Yi-Ling Chen , Danuta Gutowska-Owsiak , Clare S Hardman , Melanie Westmoreland , Teena MacKenzie , Liliana Cifuentes , Dominic Waithe , Antonia Lloyd-Lavery , Allison Marquette , Marco Londei , Graham Ogg

Ligand-dependent downregulation of MR1 cell surface expression.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Mariolina Salio , Wael Awad , Natacha Veerapen , Claudia Gonzalez-Lopez , Corinna Kulicke , Dominic Waithe , Anne W J Martens , David M Lewinsohn , Judith V Hobrath , Liam R Cox , Jamie Rossjohn , Gurdyal S Besra , Vincenzo Cerundolo

Object detection networks and augmented reality for cellular detection in fluorescence microscopy.

The Journal of cell biology

Avec: Dominic Waithe , Jill M Brown , Katharina Reglinski , Isabel Diez-Sevilla , David Roberts , Christian Eggeling

Neural network informed photon filtering reduces fluorescence correlation spectroscopy artifacts.

Biophysical journal

Avec: Alexander Seltmann , Pablo Carravilla , Katharina Reglinski , Christian Eggeling , Dominic Waithe

Annotation-free learning of a spatio-temporal manifold of the cell life cycle.

Biological imaging

Avec: Kristofer Delas Peñas , Mariia Dmitrieva , Dominic Waithe , Jens Rittscher

Congenital myasthenic syndrome due to mutations in MUSK suggests that the level of MuSK phosphorylation is crucial for governing synaptic structure.

Human mutation

Avec: Pedro M Rodríguez Cruz , Judith Cossins , Jonathan Cheung , Susan Maxwell , Sandeep Jayawant , Ruth Herbst , Dominic Waithe , Alexandr P Kornev , Jacqueline Palace , David Beeson

Measuring nanoscale diffusion dynamics in cellular membranes with super-resolution STED-FCS.

Nature protocols

Avec: Erdinc Sezgin , Falk Schneider , Silvia Galiani , Iztok Urbančič , Dominic Waithe , B Christoffer Lagerholm , Christian Eggeling

Oncogenic Gata1 causes stage-specific megakaryocyte differentiation delay.

Haematologica

Avec: Gaëtan Juban , Nathalie Sakakini , Hedia Chagraoui , David Cruz Hernandez , Qian Cheng , Kelly Soady , Bilyana Stoilova , Catherine Garnett , Dominic Waithe , Georg Otto , Jessica Doondeea , Batchimeg Usukhbayar , Elena Karkoulia , Maria Alexiou , John Strouboulis , Edward Morrissey , Irene Roberts , Catherine Porcher , Paresh Vyas

Challenges of Using Expansion Microscopy for Super-resolved Imaging of Cellular Organelles.

Chembiochem : a European journal of chemical biology

Avec: Maximilian Büttner , Christoffer B Lagerholm , Dominic Waithe , Silvia Galiani , Wolfgang Schliebs , Ralf Erdmann , Christian Eggeling , Katharina Reglinski

SNM1A is crucial for efficient repair of complex DNA breaks in human cells.

Nature communications

Avec: Lonnie P Swift , B Christoffer Lagerholm , Lucy R Henderson , Malitha Ratnaweera , Hannah T Baddock , Blanka Sengerova , Sook Lee , Abimael Cruz-Migoni , Dominic Waithe , Christian Renz , Helle D Ulrich , Joseph A Newman , Christopher J Schofield , Peter J McHugh

Réseau de co-auteurs

Christian Eggeling 5 collaborations

Katharina Reglinski 3 collaborations

Pablo Carravilla 2 collaborations

Silvia Galiani 2 collaborations

B Christoffer Lagerholm 2 collaborations

Martin Hailstone 1 collaboration

Tamsin J Samuels 1 collaboration

Lu Yang 1 collaboration

Ita Costello 1 collaboration

Yoav Arava 1 collaboration

Elizabeth Robertson 1 collaboration

Richard M Parton 1 collaboration

Ilan Davis 1 collaboration

Esther Arnaiz 1 collaboration

Ana Miar 1 collaboration

Antonio Gregorio Dias Junior 1 collaboration

Naveen Prasad 1 collaboration

Ulrike Schulze 1 collaboration

James A Nathan 1 collaboration

Jan Rehwinkel 1 collaboration

Adrian L Harris 1 collaboration

Jakub Chojnacki 1 collaboration

Edurne Rujas 1 collaboration

Sara Insausti 1 collaboration

Eneko Largo 1 collaboration

Beatriz Apellaniz 1 collaboration

Taylor Sicard 1 collaboration

Jean-Philippe Julien 1 collaboration

José L Nieva 1 collaboration

Jillian N Simon 1 collaboration

Besarte Vrellaku 1 collaboration

Stefania Monterisi 1 collaboration

Sandy M Chu 1 collaboration

Nadiia Rawlings 1 collaboration

Oliver Lomas 1 collaboration

Gerard A Marchal 1 collaboration

Fahima Syeda 1 collaboration

Parag R Gajendragadkar 1 collaboration

Raja Jayaram 1 collaboration

Rana Sayeed 1 collaboration

Keith M Channon 1 collaboration

Larissa Fabritz 1 collaboration

Pawel Swietach 1 collaboration

Manuela Zaccolo 1 collaboration

Philip Eaton 1 collaboration

Barbara Casadei 1 collaboration

S Galiani 1 collaboration

K Reglinski 1 collaboration

P Carravilla 1 collaboration

A Barbotin 1 collaboration

I Urbančič 1 collaboration

J Ott 1 collaboration

J Sehr 1 collaboration

E Sezgin 1 collaboration

F Schneider 1 collaboration

D Waithe 1 collaboration

P Hublitz 1 collaboration

W Schliebs 1 collaboration

R Erdmann 1 collaboration

C Eggeling 1 collaboration

Yi-Ling Chen 1 collaboration

Danuta Gutowska-Owsiak 1 collaboration

Clare S Hardman 1 collaboration

Melanie Westmoreland 1 collaboration

Teena MacKenzie 1 collaboration

Liliana Cifuentes 1 collaboration

Antonia Lloyd-Lavery 1 collaboration

Allison Marquette 1 collaboration

Marco Londei 1 collaboration

Graham Ogg 1 collaboration

Mariolina Salio 1 collaboration

Wael Awad 1 collaboration

Natacha Veerapen 1 collaboration

Claudia Gonzalez-Lopez 1 collaboration

Corinna Kulicke 1 collaboration

Anne W J Martens 1 collaboration

David M Lewinsohn 1 collaboration

Judith V Hobrath 1 collaboration

Liam R Cox 1 collaboration

Jamie Rossjohn 1 collaboration

Gurdyal S Besra 1 collaboration

Vincenzo Cerundolo 1 collaboration

Jill M Brown 1 collaboration

Isabel Diez-Sevilla 1 collaboration

David Roberts 1 collaboration

Alexander Seltmann 1 collaboration

Kristofer Delas Peñas 1 collaboration

Mariia Dmitrieva 1 collaboration

Jens Rittscher 1 collaboration

Pedro M Rodríguez Cruz 1 collaboration

Judith Cossins 1 collaboration

Jonathan Cheung 1 collaboration

Susan Maxwell 1 collaboration

Sandeep Jayawant 1 collaboration

Ruth Herbst 1 collaboration

Alexandr P Kornev 1 collaboration

Jacqueline Palace 1 collaboration

David Beeson 1 collaboration

Erdinc Sezgin 1 collaboration

Falk Schneider 1 collaboration

Iztok Urbančič 1 collaboration

Gaëtan Juban 1 collaboration

Nathalie Sakakini 1 collaboration

Hedia Chagraoui 1 collaboration

David Cruz Hernandez 1 collaboration

Qian Cheng 1 collaboration

Kelly Soady 1 collaboration

Bilyana Stoilova 1 collaboration

Catherine Garnett 1 collaboration

Georg Otto 1 collaboration

Jessica Doondeea 1 collaboration

Batchimeg Usukhbayar 1 collaboration

Elena Karkoulia 1 collaboration

Maria Alexiou 1 collaboration

John Strouboulis 1 collaboration

Edward Morrissey 1 collaboration

Irene Roberts 1 collaboration

Catherine Porcher 1 collaboration

Paresh Vyas 1 collaboration

Maximilian Büttner 1 collaboration

Christoffer B Lagerholm 1 collaboration

Wolfgang Schliebs 1 collaboration

Ralf Erdmann 1 collaboration

Lonnie P Swift 1 collaboration

Lucy R Henderson 1 collaboration

Malitha Ratnaweera 1 collaboration

Hannah T Baddock 1 collaboration

Blanka Sengerova 1 collaboration

Sook Lee 1 collaboration

Abimael Cruz-Migoni 1 collaboration

Christian Renz 1 collaboration

Helle D Ulrich 1 collaboration

Joseph A Newman 1 collaboration

Christopher J Schofield 1 collaboration

Peter J McHugh 1 collaboration