Neetha Nanoth Vellichirammal

Affiliations

Department of Genetics, Cell Biology and Anatomy, University of Nebraska Medical Center, Omaha, Nebraska, USA.

Publications (22)

A citizen science initiative for open data and visualization of COVID-19 outbreak in Kerala, India.

Journal of the American Medical Informatics Association : JAMIA

Avec: Jijo Pulickiyil Ulahannan , Nikhil Narayanan , Nishad Thalhath , Prem Prabhakaran , Sreekanth Chaliyeduth , Sooraj P Suresh , Musfir Mohammed , E Rajeevan , Sindhu Joseph , Akhil Balakrishnan , Jeevan Uthaman , Manoj Karingamadathil , Sunil Thonikkuzhiyil Thomas , Unnikrishnan Sureshkumar , Shabeesh Balan , Neetha Nanoth Vellichirammal , Auteur inconnu

Pan-Cancer Analysis Reveals the Diverse Landscape of Novel Sense and Antisense Fusion Transcripts.

Molecular therapy. Nucleic acids

Avec: Neetha Nanoth Vellichirammal , Abrar Albahrani , Jasjit K Banwait , Nitish K Mishra , You Li , Shrabasti Roychoudhury , Mathew J Kling , Sameer Mirza , Kishor K Bhakat , Vimla Band , Shantaram S Joshi , Chittibabu Guda

Distinct Synaptic Vesicle Proteomic Signatures Associated with Pre- and Post-Natal Oxycodone-Exposure.

Cells

Avec: Katherine E Odegaard , Gabriel Gallegos , Sneh Koul , Victoria L Schaal , Neetha N Vellichirammal , Chittibabu Guda , Andrea P Dutoit , Steven J Lisco , Sowmya V Yelamanchili , Gurudutt Pendyala

Fusion genes as biomarkers in pediatric cancers: A review of the current state and applicability in diagnostics and personalized therapy.

Cancer letters

Avec: Neetha Nanoth Vellichirammal , Nagendra K Chaturvedi , Shantaram S Joshi , Donald W Coulter , Chittibabu Guda

Correction: Odegaard et al. Distinct Synaptic Vesicle Proteomic Signatures Associated with Pre- and Post-Natal Oxycodone-Exposure.

Cells

A Review of Radiation-Induced Alterations of Multi-Omic Profiles, Radiation Injury Biomarkers, and Countermeasures.

Radiation research

Avec: Sushil K Shakyawar , Nitish K Mishra , Neetha N Vellichirammal , Lynnette Cary , Tomáš Helikar , Robert Powers , Rebecca E Oberley-Deegan , David B Berkowitz , Kenneth W Bayles , Vijay K Singh , Chittibabu Guda

The mutational landscape of a US Midwestern breast cancer cohort reveals subtype-specific cancer drivers and prognostic markers.

Human genomics

Avec: Neetha Nanoth Vellichirammal , Yuan-De Tan , Peng Xiao , James Eudy , Oleg Shats , David Kelly , Michelle Desler , Kenneth Cowan , Chittibabu Guda

Identification of Fusion Transcripts from Unaligned RNA-Seq Reads Using ChimeRScope.

Methods in molecular biology (Clifton, N.J.)

Avec: Neetha Nanoth Vellichirammal , Abrar Albahrani , You Li , Chittibabu Guda

Decoding the Synaptic Proteome with Long-Term Exposure to Midazolam during Early Development.

International journal of molecular sciences

Avec: Nghi M Nguyen , Neetha N Vellichirammal , Chittibabu Guda , Gurudutt Pendyala

Lung transcriptome of nonhuman primates exposed to total- and partial-body irradiation.

Molecular therapy. Nucleic acids

Avec: Neetha Nanoth Vellichirammal , Sahil Sethi , Sanjit Pandey , Jatinder Singh , Stephen Y Wise , Alana D Carpenter , Oluseyi O Fatanmi , Chittibabu Guda , Vijay K Singh

Contribution from MHC-Mediated Risk in Schizophrenia Can Reflect a More Ethnic-Specific Genetic and Comorbid Background.

Cells

Avec: Lekshmy Srinivas , Neetha N Vellichirammal , Indu V Nair , Chandrasekharan M Nair , Moinak Banerjee

A compiled dataset of molecular pathways associated with fusion genes identified in pediatric cancers.

Data in brief

Avec: Neetha N Vellichirammal , Chittibabu Guda

A large genomic insertion containing a duplicated follistatin gene is linked to the pea aphid male wing dimorphism.

eLife

Avec: Binshuang Li , Ryan D Bickel , Benjamin J Parker , Omid Saleh Ziabari , Fangzhou Liu , Neetha Nanoth Vellichirammal , Jean-Christophe Simon , David L Stern , Jennifer A Brisson

Quantitative Proteomics Identifies Novel Nrf2-Mediated Adaptative Signaling Pathways in Skeletal Muscle Following Exercise Training.

Antioxidants (Basel, Switzerland)

Avec: Anjali Bhat , Rafay Abu , Sankarasubramanian Jagadesan , Neetha Nanoth Vellichirammal , Ved Vasishtha Pendyala , Li Yu , Tara L Rudebush , Chittibabu Guda , Irving H Zucker , Vikas Kumar , Lie Gao

Transcriptome profile changes in the jejunum of nonhuman primates exposed to supralethal dose of total- or partial-body radiation.

BMC genomics

Avec: Neetha Nanoth Vellichirammal , Sahil Sethi , Nagavardhini Avuthu , Stephen Y Wise , Alana D Carpenter , Oluseyi O Fatanmi , Chittibabu Guda , Vijay K Singh

Methylome-wide and meQTL analysis helps to distinguish treatment response from non-response and pathogenesis markers in schizophrenia.

Frontiers in psychiatry

Avec: Binithamol K Polakkattil , Neetha N Vellichirammal , Indu V Nair , Chandrasekharan M Nair , Moinak Banerjee

Functional, proteomic and bioinformatic analyses of Nrf2- and Keap1- null skeletal muscle.

The Journal of physiology

Avec: Lie Gao , Vikas Kumar , Neetha Nanoth Vellichirammal , Song-Young Park , Tara L Rudebush , Li Yu , Won-Mok Son , Elizabeth J Pekas , Ahmed M Wafi , Juan Hong , Peng Xiao , Chittibabu Guda , Han-Jun Wang , Harold D Schultz , Irving H Zucker

Comprehensive Characterization of Nanosized Extracellular Vesicles from Central and Peripheral Organs : Implications for Preclinical and Clinical Applications.

ACS applied nano materials

Avec: Subhash Chand , Ala Jo , Neetha Nanoth Vellichirammal , Austin Gowen , Chittibabu Guda , Victoria Schaal , Katherine Odegaard , Hakho Lee , Gurudutt Pendyala , Sowmya V Yelamanchili

Cardiac Spinal Afferent Denervation Attenuates Renal Dysfunction in Rats With Cardiorenal Syndrome Type 2.

JACC. Basic to translational science

Avec: Zhiqiu Xia , Neetha Nanoth Vellichirammal , Li Han , Lie Gao , Erika I Boesen , Alicia M Schiller , Peter R Pellegrino , Steven J Lisco , Chittibabu Guda , Irving H Zucker , Han-Jun Wang

Co-Transcriptomic Analysis of the Maize-Western Corn Rootworm Interaction.

Plants (Basel, Switzerland)

Avec: Lise Pingault , Saumik Basu , Neetha N Vellichirammal , William Paul Williams , Gautam Sarath , Joe Louis

Fusion gene recurrence in non-small cell lung cancers and its association with cigarette smoke exposure.

Translational lung cancer research

Avec: Neetha Nanoth Vellichirammal , Abrar Albahrani , Chittibabu Guda

A draft Diabrotica virgifera virgifera genome: insights into control and host plant adaption by a major maize pest insect.

BMC genomics

Avec: Brad S Coates , Kimberly K O Walden , Dimpal Lata , Neetha Nanoth Vellichirammal , Robert F Mitchell , Martin N Andersson , Rachel McKay , Marcé D Lorenzen , Nathaniel Grubbs , Yu-Hui Wang , Jinlong Han , Jing Li Xuan , Peter Willadsen , Huichun Wang , B Wade French , Raman Bansal , Sammy Sedky , Dariane Souza , Dakota Bunn , Lance J Meinke , Nicholas J Miller , Blair D Siegfried , Thomas W Sappington , Hugh M Robertson

Réseau de co-auteurs

Chittibabu Guda 16 collaborations

Neetha N Vellichirammal 8 collaborations

Gurudutt Pendyala 4 collaborations

Abrar Albahrani 3 collaborations

Steven J Lisco 3 collaborations

Sowmya V Yelamanchili 3 collaborations

Vijay K Singh 3 collaborations

Irving H Zucker 3 collaborations

Lie Gao 3 collaborations

Nitish K Mishra 2 collaborations

You Li 2 collaborations

Shantaram S Joshi 2 collaborations

Katherine E Odegaard 2 collaborations

Gabriel Gallegos 2 collaborations

Sneh Koul 2 collaborations

Victoria L Schaal 2 collaborations

Andrea P Dutoit 2 collaborations

Peng Xiao 2 collaborations

Sahil Sethi 2 collaborations

Stephen Y Wise 2 collaborations

Alana D Carpenter 2 collaborations

Oluseyi O Fatanmi 2 collaborations

Indu V Nair 2 collaborations

Chandrasekharan M Nair 2 collaborations

Moinak Banerjee 2 collaborations

Li Yu 2 collaborations

Tara L Rudebush 2 collaborations

Vikas Kumar 2 collaborations

Han-Jun Wang 2 collaborations

Jijo Pulickiyil Ulahannan 1 collaboration

Nikhil Narayanan 1 collaboration

Nishad Thalhath 1 collaboration

Prem Prabhakaran 1 collaboration

Sreekanth Chaliyeduth 1 collaboration

Sooraj P Suresh 1 collaboration

Musfir Mohammed 1 collaboration

E Rajeevan 1 collaboration

Sindhu Joseph 1 collaboration

Akhil Balakrishnan 1 collaboration

Jeevan Uthaman 1 collaboration

Manoj Karingamadathil 1 collaboration

Sunil Thonikkuzhiyil Thomas 1 collaboration

Unnikrishnan Sureshkumar 1 collaboration

Shabeesh Balan 1 collaboration

None None 1 collaboration

Jasjit K Banwait 1 collaboration

Shrabasti Roychoudhury 1 collaboration

Mathew J Kling 1 collaboration

Sameer Mirza 1 collaboration

Kishor K Bhakat 1 collaboration

Vimla Band 1 collaboration

Nagendra K Chaturvedi 1 collaboration

Donald W Coulter 1 collaboration

Sushil K Shakyawar 1 collaboration

Lynnette Cary 1 collaboration

Tomáš Helikar 1 collaboration

Robert Powers 1 collaboration

Rebecca E Oberley-Deegan 1 collaboration

David B Berkowitz 1 collaboration

Kenneth W Bayles 1 collaboration

Yuan-De Tan 1 collaboration

James Eudy 1 collaboration

Oleg Shats 1 collaboration

David Kelly 1 collaboration

Michelle Desler 1 collaboration

Kenneth Cowan 1 collaboration

Nghi M Nguyen 1 collaboration

Sanjit Pandey 1 collaboration

Jatinder Singh 1 collaboration

Lekshmy Srinivas 1 collaboration

Binshuang Li 1 collaboration

Ryan D Bickel 1 collaboration

Benjamin J Parker 1 collaboration

Omid Saleh Ziabari 1 collaboration

Fangzhou Liu 1 collaboration

Jean-Christophe Simon 1 collaboration

David L Stern 1 collaboration

Jennifer A Brisson 1 collaboration

Anjali Bhat 1 collaboration

Rafay Abu 1 collaboration

Sankarasubramanian Jagadesan 1 collaboration

Ved Vasishtha Pendyala 1 collaboration

Nagavardhini Avuthu 1 collaboration

Binithamol K Polakkattil 1 collaboration

Song-Young Park 1 collaboration

Won-Mok Son 1 collaboration

Elizabeth J Pekas 1 collaboration

Ahmed M Wafi 1 collaboration

Juan Hong 1 collaboration

Harold D Schultz 1 collaboration

Subhash Chand 1 collaboration

Ala Jo 1 collaboration

Austin Gowen 1 collaboration

Victoria Schaal 1 collaboration

Katherine Odegaard 1 collaboration

Hakho Lee 1 collaboration

Zhiqiu Xia 1 collaboration

Li Han 1 collaboration

Erika I Boesen 1 collaboration

Alicia M Schiller 1 collaboration

Peter R Pellegrino 1 collaboration

Lise Pingault 1 collaboration

Saumik Basu 1 collaboration

William Paul Williams 1 collaboration

Gautam Sarath 1 collaboration

Joe Louis 1 collaboration

Brad S Coates 1 collaboration

Kimberly K O Walden 1 collaboration

Dimpal Lata 1 collaboration

Robert F Mitchell 1 collaboration

Martin N Andersson 1 collaboration

Rachel McKay 1 collaboration

Marcé D Lorenzen 1 collaboration

Nathaniel Grubbs 1 collaboration

Yu-Hui Wang 1 collaboration

Jinlong Han 1 collaboration

Jing Li Xuan 1 collaboration

Peter Willadsen 1 collaboration

Huichun Wang 1 collaboration

B Wade French 1 collaboration

Raman Bansal 1 collaboration

Sammy Sedky 1 collaboration

Dariane Souza 1 collaboration

Dakota Bunn 1 collaboration

Lance J Meinke 1 collaboration

Nicholas J Miller 1 collaboration

Blair D Siegfried 1 collaboration

Thomas W Sappington 1 collaboration

Hugh M Robertson 1 collaboration