Susan R McCouch

Affiliations

Plant Breeding and Genetics, Cornell University, Ithaca, NY, United States.

Publications (21)

Multiple Small-Effect Alleles of

Frontiers in plant science

Avec: Giovanni Melandri , Mouritala Sikirou , Juan D Arbelaez , Afeez Shittu , Vimal K Semwal , Kadougoudiou A Konaté , Alhassan T Maji , Steven A Ngaujah , Inoussa Akintayo , Vishnu Govindaraj , Yuxin Shi , Francisco J Agosto-Peréz , Anthony J Greenberg , Gary Atlin , Venuprasad Ramaiah , Susan R McCouch

A massively parallel barcoded sequencing pipeline enables generation of the first ORFeome and interactome map for rice.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Shayne D Wierbowski , Tommy V Vo , Pascal Falter-Braun , Timothy O Jobe , Lars H Kruse , Xiaomu Wei , Jin Liang , Michael J Meyer , Nurten Akturk , Christen A Rivera-Erick , Nicolas A Cordero , Mauricio I Paramo , Elnur E Shayhidin , Marta Bertolotti , Nathaniel D Tippens , Kazi Akther , Rita Sharma , Yuichi Katayose , Kourosh Salehi-Ashtiani , Tong Hao , Pamela C Ronald , Joseph R Ecker , Peter A Schweitzer , Shoshi Kikuchi , Hiroshi Mizuno , David E Hill , Marc Vidal , Gaurav D Moghe , Susan R McCouch , Haiyuan Yu

Low Additive Genetic Variation in a Trait Under Selection in Domesticated Rice.

G3 (Bethesda, Md.)

Avec: Nicholas G Karavolias , Anthony J Greenberg , Luz S Barrero , Lyza G Maron , Yuxin Shi , Eliana Monteverde , Miguel A Piñeros , Susan R McCouch

Genetic mapping identifies a rice naringenin O-glucosyltransferase that influences insect resistance.

The Plant journal : for cell and molecular biology

Avec: Zhongyan Yang , Nana Li , Takashige Kitano , Ping Li , Jennifer E Spindel , Lishuo Wang , Genxiang Bai , Yiying Xiao , Susan R McCouch , Atsushi Ishihara , Jili Zhang , Xin Yang , Zepeng Chen , Jianyu Wei , Honghua Ge , Georg Jander , Jian Yan

Corrigendum: A Coordinated Suite of Wild-Introgression Lines in

Frontiers in plant science

Avec: Namrata Singh , Diane R Wang , Liakat Ali , HyunJung Kim , Kazi M Akther , Sandra E Harrington , Ju-Won Kang , Ehsan Shakiba , Yuxin Shi , Genevieve DeClerck , Byron Meadows , Vishnu Govindaraj , Sang-Nag Ahn , Georgia C Eizenga , Susan R McCouch

A Coordinated Suite of Wild-Introgression Lines in

Frontiers in plant science

Validation of Yield Component Traits Identified by Genome-Wide Association Mapping in a

The plant genome

Avec: Georgia C Eizenga , Melissa H Jia , Aaron K Jackson , Debbie L Boykin , M Liakat Ali , Ehsan Shakiba , Nhien T Tran , Susan R McCouch , Jeremy D Edwards

An improved 7K SNP array, the C7AIR, provides a wealth of validated SNP markers for rice breeding and genetics studies.

PloS one

Avec: Karina Y Morales , Namrata Singh , Francisco Agosto Perez , John Carlos Ignacio , Ranjita Thapa , Juan D Arbelaez , Rodante E Tabien , Adam Famoso , Diane R Wang , Endang M Septiningsih , Yuxin Shi , Tobias Kretzschmar , Susan R McCouch , Michael J Thomson

Can biochemical traits bridge the gap between genomics and plant performance? A study in rice under drought.

Plant physiology

Avec: Giovanni Melandri , Eliana Monteverde , David Riewe , Hamada AbdElgawad , Susan R McCouch , Harro Bouwmeester

Development and validation of an optimized marker set for genomic selection in southern U.S. rice breeding programs.

The plant genome

Avec: Tommaso Cerioli , Christopher O Hernandez , Brijesh Angira , Susan R McCouch , Kelly R Robbins , Adam N Famoso

Identifying genes associated with abiotic stress tolerance suitable for CRISPR/Cas9 editing in upland rice cultivars adapted to acid soils.

Plant direct

Avec: Luz S Barrero , Matthew R Willmann , Eric J Craft , Kazi M Akther , Sandra E Harrington , Gina A Garzon-Martinez , Raymond P Glahn , Miguel A Piñeros , Susan R McCouch

Bridging old and new: diversity and evaluation of high iron-associated stress response of rice cultivated in West Africa.

Journal of experimental botany

Avec: Bathe Diop , Diane R Wang , Khady N Drame , Vernon Gracen , Pangirayi Tongoona , Daniel Dzidzienyo , Eric Nartey , Anthony J Greenberg , Saliou Djiba , Eric Y Danquah , Susan R McCouch

Association mapping and genetic dissection of drought-induced canopy temperature differences in rice.

Journal of experimental botany

Avec: Giovanni Melandri , Ankush Prashar , Susan R McCouch , Gerard van der Linden , Hamlyn G Jones , Niteen Kadam , Krishna Jagadish , Harro Bouwmeester , Carolien Ruyter-Spira

Reap the crop wild relatives for breeding future crops.

Trends in biotechnology

Avec: Abhishek Bohra , Benjamin Kilian , Shoba Sivasankar , Mario Caccamo , Chikelu Mba , Susan R McCouch , Rajeev K Varshney

Genome wide association analysis of root hair traits in rice reveals novel genomic regions controlling epidermal cell differentiation.

BMC plant biology

Avec: Meredith T Hanlon , Phanchita Vejchasarn , Jenna E Fonta , Hannah M Schneider , Susan R McCouch , Kathleen M Brown

Positive effects of public breeding on US rice yields under future climate scenarios.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Diane R Wang , Sajad Jamshidi , Rongkui Han , Jeremy D Edwards , Anna M McClung , Susan R McCouch

Addressing Research Bottlenecks to Crop Productivity.

Trends in plant science

Avec: Matthew Reynolds , Owen K Atkin , Malcolm Bennett , Mark Cooper , Ian C Dodd , M John Foulkes , Claus Frohberg , Graeme Hammer , Ian R Henderson , Bingru Huang , Viktor Korzun , Susan R McCouch , Carlos D Messina , Barry J Pogson , Gustavo A Slafer , Nicolas L Taylor , Peter E Wittich

Genetic architecture of root and shoot ionomes in rice (Oryza sativa L.).

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik

Avec: Joshua N Cobb , Chen Chen , Yuxin Shi , Lyza G Maron , Danni Liu , Mike Rutzke , Anthony Greenberg , Eric Craft , Jon Shaff , Edyth Paul , Kazi Akther , Shaokui Wang , Leon V Kochian , Dabao Zhang , Min Zhang , Susan R McCouch

Genome wide association studies for japonica rice resistance to blast in field and controlled conditions.

Rice (New York, N.Y.)

Avec: Andrea Volante , Alessandro Tondelli , Francesca Desiderio , Pamela Abbruscato , Barbara Menin , Chiara Biselli , Laura Casella , Namrata Singh , Susan R McCouch , Didier Tharreau , Elisa Zampieri , Luigi Cattivelli , Giampiero Valè

Phenotypic Variation and the Impact of Admixture in the

Frontiers in plant science

Avec: Georgia C Eizenga , HyunJung Kim , Janelle K H Jung , Anthony J Greenberg , Jeremy D Edwards , Maria Elizabeth B Naredo , Maria Celeste N Banaticla-Hilario , Sandra E Harrington , Yuxin Shi , Jennifer A Kimball , Lisa A Harper , Kenneth L McNally , Susan R McCouch

Proceedings of the National Academy of Sciences of the United States of America

Avec: Kanako Bessho-Uehara , Kengo Masuda , Diane R Wang , Rosalyn B Angeles-Shim , Keisuke Obara , Keisuke Nagai , Riri Murase , Shin-Ichiro Aoki , Tomoyuki Furuta , Kotaro Miura , Jianzhong Wu , Yoshiyuki Yamagata , Hideshi Yasui , Michael B Kantar , Atsushi Yoshimura , Takumi Kamura , Susan R McCouch , Motoyuki Ashikari

Réseau de co-auteurs

Yuxin Shi 7 collaborations

Diane R Wang 6 collaborations

Anthony J Greenberg 4 collaborations

Namrata Singh 4 collaborations

Sandra E Harrington 4 collaborations

Georgia C Eizenga 4 collaborations

Giovanni Melandri 3 collaborations

Vishnu Govindaraj 3 collaborations

HyunJung Kim 3 collaborations

Kazi M Akther 3 collaborations

Ehsan Shakiba 3 collaborations

Jeremy D Edwards 3 collaborations

Juan D Arbelaez 2 collaborations

Kazi Akther 2 collaborations

Luz S Barrero 2 collaborations

Lyza G Maron 2 collaborations

Eliana Monteverde 2 collaborations

Miguel A Piñeros 2 collaborations

Liakat Ali 2 collaborations

Ju-Won Kang 2 collaborations

Genevieve DeClerck 2 collaborations

Byron Meadows 2 collaborations

Sang-Nag Ahn 2 collaborations

Harro Bouwmeester 2 collaborations

Mouritala Sikirou 1 collaboration

Afeez Shittu 1 collaboration

Vimal K Semwal 1 collaboration

Kadougoudiou A Konaté 1 collaboration

Alhassan T Maji 1 collaboration

Steven A Ngaujah 1 collaboration

Inoussa Akintayo 1 collaboration

Francisco J Agosto-Peréz 1 collaboration

Gary Atlin 1 collaboration

Venuprasad Ramaiah 1 collaboration

Shayne D Wierbowski 1 collaboration

Tommy V Vo 1 collaboration

Pascal Falter-Braun 1 collaboration

Timothy O Jobe 1 collaboration

Lars H Kruse 1 collaboration

Xiaomu Wei 1 collaboration

Jin Liang 1 collaboration

Michael J Meyer 1 collaboration

Nurten Akturk 1 collaboration

Christen A Rivera-Erick 1 collaboration

Nicolas A Cordero 1 collaboration

Mauricio I Paramo 1 collaboration

Elnur E Shayhidin 1 collaboration

Marta Bertolotti 1 collaboration

Nathaniel D Tippens 1 collaboration

Rita Sharma 1 collaboration

Yuichi Katayose 1 collaboration

Kourosh Salehi-Ashtiani 1 collaboration

Tong Hao 1 collaboration

Pamela C Ronald 1 collaboration

Joseph R Ecker 1 collaboration

Peter A Schweitzer 1 collaboration

Shoshi Kikuchi 1 collaboration

Hiroshi Mizuno 1 collaboration

David E Hill 1 collaboration

Marc Vidal 1 collaboration

Gaurav D Moghe 1 collaboration

Haiyuan Yu 1 collaboration

Nicholas G Karavolias 1 collaboration

Zhongyan Yang 1 collaboration

Nana Li 1 collaboration

Takashige Kitano 1 collaboration

Ping Li 1 collaboration

Jennifer E Spindel 1 collaboration

Lishuo Wang 1 collaboration

Genxiang Bai 1 collaboration

Yiying Xiao 1 collaboration

Atsushi Ishihara 1 collaboration

Jili Zhang 1 collaboration

Xin Yang 1 collaboration

Zepeng Chen 1 collaboration

Jianyu Wei 1 collaboration

Honghua Ge 1 collaboration

Georg Jander 1 collaboration

Jian Yan 1 collaboration

Melissa H Jia 1 collaboration

Aaron K Jackson 1 collaboration

Debbie L Boykin 1 collaboration

M Liakat Ali 1 collaboration

Nhien T Tran 1 collaboration

Karina Y Morales 1 collaboration

Francisco Agosto Perez 1 collaboration

John Carlos Ignacio 1 collaboration

Ranjita Thapa 1 collaboration

Rodante E Tabien 1 collaboration

Adam Famoso 1 collaboration

Endang M Septiningsih 1 collaboration

Tobias Kretzschmar 1 collaboration

Michael J Thomson 1 collaboration

David Riewe 1 collaboration

Hamada AbdElgawad 1 collaboration

Tommaso Cerioli 1 collaboration

Christopher O Hernandez 1 collaboration

Brijesh Angira 1 collaboration

Kelly R Robbins 1 collaboration

Adam N Famoso 1 collaboration

Matthew R Willmann 1 collaboration

Eric J Craft 1 collaboration

Gina A Garzon-Martinez 1 collaboration

Raymond P Glahn 1 collaboration

Bathe Diop 1 collaboration

Khady N Drame 1 collaboration

Vernon Gracen 1 collaboration

Pangirayi Tongoona 1 collaboration

Daniel Dzidzienyo 1 collaboration

Eric Nartey 1 collaboration

Saliou Djiba 1 collaboration

Eric Y Danquah 1 collaboration

Ankush Prashar 1 collaboration

Gerard van der Linden 1 collaboration

Hamlyn G Jones 1 collaboration

Niteen Kadam 1 collaboration

Krishna Jagadish 1 collaboration

Carolien Ruyter-Spira 1 collaboration

Abhishek Bohra 1 collaboration

Benjamin Kilian 1 collaboration

Shoba Sivasankar 1 collaboration

Mario Caccamo 1 collaboration

Chikelu Mba 1 collaboration

Rajeev K Varshney 1 collaboration

Meredith T Hanlon 1 collaboration

Phanchita Vejchasarn 1 collaboration

Jenna E Fonta 1 collaboration

Hannah M Schneider 1 collaboration

Kathleen M Brown 1 collaboration

Sajad Jamshidi 1 collaboration

Rongkui Han 1 collaboration

Anna M McClung 1 collaboration

Matthew Reynolds 1 collaboration

Owen K Atkin 1 collaboration

Malcolm Bennett 1 collaboration

Mark Cooper 1 collaboration

Ian C Dodd 1 collaboration

M John Foulkes 1 collaboration

Claus Frohberg 1 collaboration

Graeme Hammer 1 collaboration

Ian R Henderson 1 collaboration

Bingru Huang 1 collaboration

Viktor Korzun 1 collaboration

Carlos D Messina 1 collaboration

Barry J Pogson 1 collaboration

Gustavo A Slafer 1 collaboration

Nicolas L Taylor 1 collaboration

Peter E Wittich 1 collaboration

Joshua N Cobb 1 collaboration

Chen Chen 1 collaboration

Danni Liu 1 collaboration

Mike Rutzke 1 collaboration

Anthony Greenberg 1 collaboration

Eric Craft 1 collaboration

Jon Shaff 1 collaboration

Edyth Paul 1 collaboration

Shaokui Wang 1 collaboration

Leon V Kochian 1 collaboration

Dabao Zhang 1 collaboration

Min Zhang 1 collaboration

Andrea Volante 1 collaboration

Alessandro Tondelli 1 collaboration

Francesca Desiderio 1 collaboration

Pamela Abbruscato 1 collaboration

Barbara Menin 1 collaboration

Chiara Biselli 1 collaboration

Laura Casella 1 collaboration

Didier Tharreau 1 collaboration

Elisa Zampieri 1 collaboration

Luigi Cattivelli 1 collaboration

Giampiero Valè 1 collaboration

Janelle K H Jung 1 collaboration

Maria Elizabeth B Naredo 1 collaboration

Maria Celeste N Banaticla-Hilario 1 collaboration

Jennifer A Kimball 1 collaboration

Lisa A Harper 1 collaboration

Kenneth L McNally 1 collaboration

Kanako Bessho-Uehara 1 collaboration

Kengo Masuda 1 collaboration

Rosalyn B Angeles-Shim 1 collaboration

Keisuke Obara 1 collaboration

Keisuke Nagai 1 collaboration

Riri Murase 1 collaboration

Shin-Ichiro Aoki 1 collaboration

Tomoyuki Furuta 1 collaboration

Kotaro Miura 1 collaboration

Jianzhong Wu 1 collaboration

Yoshiyuki Yamagata 1 collaboration

Hideshi Yasui 1 collaboration

Michael B Kantar 1 collaboration

Atsushi Yoshimura 1 collaboration

Takumi Kamura 1 collaboration

Motoyuki Ashikari 1 collaboration