Timothy Ravasi

Affiliations

KAUST Environmental Epigenetic Program (KEEP), Division of Biological and Environmental Sciences & Engineering, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia.

Publications (37)

Viral ecogenomics across the Porifera.

Microbiome

Avec: Cecília Pascelli , Patrick W Laffy , Emmanuelle Botté , Marija Kupresanin , Thomas Rattei , Miguel Lurgi , Timothy Ravasi , Nicole S Webster

Matching maternal and paternal experiences underpin molecular thermal acclimation.

Molecular ecology

Avec: L C Bonzi , J M Donelson , R K Spinks , P L Munday , T Ravasi , C Schunter

Microbiome manipulation by corals and other Cnidaria via quorum quenching.

Current biology : CB

Avec: Benjamin Mason , David C Hayward , Aurelie Moya , Ira Cooke , Alanna Sorenson , Ramona Brunner , Natalia Andrade , Roger Huerlimann , David G Bourne , Patrick Schaeffer , Mila Grinblat , Timothy Ravasi , Nobuo Ueda , Sen-Lin Tang , Eldon E Ball , David J Miller

Nuclear AGO1 Regulates Gene Expression by Affecting Chromatin Architecture in Human Cells.

Cell systems

Avec: Muhammad Shuaib , Krishna Mohan Parsi , Manjula Thimma , Sabir Abdu Adroub , Hideya Kawaji , Loqmane Seridi , Yanal Ghosheh , Alexandre Fort , Bodor Fallatah , Timothy Ravasi , Piero Carninci , Valerio Orlando

Sex- and time-specific parental effects of warming on reproduction and offspring quality in a coral reef fish.

Evolutionary applications

Avec: Rachel K Spinks , Lucrezia C Bonzi , Timothy Ravasi , Philip L Munday , Jennifer M Donelson

Diel pCO

Molecular ecology

Avec: Celia Schunter , Michael D Jarrold , Philip L Munday , Timothy Ravasi

The alternative splicing landscape of a coral reef fish during a marine heatwave.

Ecology and evolution

Avec: Stanley Kin Nok Chan , Sneha Suresh , Phillip Munday , Timothy Ravasi , Moisés A Bernal , Celia Schunter

A chromosome-scale genome assembly of the false clownfish, Amphiprion ocellaris.

G3 (Bethesda, Md.)

Avec: Taewoo Ryu , Marcela Herrera , Billy Moore , Michael Izumiyama , Erina Kawai , Vincent Laudet , Timothy Ravasi

Neuro-molecular characterization of fish cleaning interactions.

Scientific reports

Avec: S Ramírez-Calero , J R Paula , E Otjacques , R Rosa , T Ravasi , C Schunter

Research priorities for the sustainability of coral-rich western Pacific seascapes.

Regional environmental change

Avec: Graeme S Cumming , Maja Adamska , Michele L Barnes , Jon Barnett , David R Bellwood , Joshua E Cinner , Philippa J Cohen , Jennifer M Donelson , Katharina Fabricius , R Quentin Grafton , Alana Grech , Georgina G Gurney , Ove Hoegh-Guldberg , Andrew S Hoey , Mia O Hoogenboom , Jacqueline Lau , Catherine E Lovelock , Ryan Lowe , David J Miller , Tiffany H Morrison , Peter J Mumby , Martin Nakata , John M Pandolfi , Garry D Peterson , Morgan S Pratchett , Timothy Ravasi , Cynthia Riginos , Jodie L Rummer , Britta Schaffelke , Thomas Wernberg , Shaun K Wilson

Niche-dependent sponge hologenome expression profiles and the host-microbes interplay: a case of the hawaiian demosponge Mycale Grandis.

Environmental microbiome

Avec: Fang Liu , Taewoo Ryu , Timothy Ravasi , Xin Wang , Guangyi Wang , Zhiyong Li

Finding Nemo's Genes: A chromosome-scale reference assembly of the genome of the orange clownfish Amphiprion percula.

Molecular ecology resources

Avec: Robert Lehmann , Damien J Lightfoot , Celia Schunter , Craig T Michell , Hajime Ohyanagi , Katsuhiko Mineta , Sylvain Foret , Michael L Berumen , David J Miller , Manuel Aranda , Takashi Gojobori , Philip L Munday , Timothy Ravasi

Neural effects of elevated CO

Conservation physiology

Avec: Celia Schunter , Timothy Ravasi , Philip L Munday , Göran E Nilsson

Clownfish larvae exhibit faster growth, higher metabolic rates and altered gene expression under future ocean warming.

The Science of the total environment

Avec: Billy Moore , Jeffrey Jolly , Michael Izumiyama , Erina Kawai , Taewoo Ryu , Timothy Ravasi

Parents exposed to warming produce offspring lower in weight and condition.

Ecology and evolution

Avec: Rachel K Spinks , Jennifer M Donelson , Lucrezia C Bonzi , Timothy Ravasi , Philip L Munday

Brain transcriptome of gobies inhabiting natural CO

Evolutionary applications

Avec: Sneha Suresh , Alice Mirasole , Timothy Ravasi , Salvatrice Vizzini , Celia Schunter

Neuromolecular responses in disrupted mutualistic cleaning interactions under future environmental conditions.

BMC biology

Avec: S Ramírez-Calero , J R Paula , E Otjacques , T Ravasi , R Rosa , C Schunter

Anemonefishes: A model system for evolutionary genomics.

F1000Research

Avec: Marcela Herrera , Timothy Ravasi , Vincent Laudet

Timing-specific parental effects of ocean warming in a coral reef fish.

Proceedings. Biological sciences

Avec: L C Bonzi , R K Spinks , J M Donelson , P L Munday , T Ravasi , C Schunter

Neural mechanisms of mutualistic fish cleaning behaviour: a study in the wild.

Biology letters

Avec: Daniele Romeo , Sandra Ramirez-Calero , Timothy Ravasi , Riccardo Rodolfo-Metalpa , Celia Schunter

Beyond buying time: the role of plasticity in phenotypic adaptation to rapid environmental change.

Philosophical transactions of the Royal Society of London. Series B, Biological sciences

Avec: Rebecca J Fox , Jennifer M Donelson , Celia Schunter , Timothy Ravasi , Juan D Gaitán-Espitia

Iron-Based Core-Shell Nanowires for Combinatorial Drug Delivery and Photothermal and Magnetic Therapy.

ACS applied materials & interfaces

Avec: Aldo Isaac Martínez-Banderas , Antonio Aires , Marta Quintanilla , Jorge A Holguín-Lerma , Claudia Lozano-Pedraza , Francisco J Teran , Julián A Moreno , Jose E Perez , Boon S Ooi , Timothy Ravasi , Jasmeen S Merzaban , Aitziber L Cortajarena , Jürgen Kosel

Probing SWATH-MS as a tool for proteome level quantification in a nonmodel fish.

Molecular ecology resources

Avec: Alison A Monroe , Huoming Zhang , Celia Schunter , Timothy Ravasi

Magnetic core-shell nanowires as MRI contrast agents for cell tracking.

Journal of nanobiotechnology

Avec: Aldo Isaac Martínez-Banderas , Antonio Aires , Sandra Plaza-García , Lorena Colás , Julián A Moreno , Timothy Ravasi , Jasmeen S Merzaban , Pedro Ramos-Cabrer , Aitziber L Cortajarena , Jürgen Kosel

Functionalization of Magnetic Nanowires for Active Targeting and Enhanced Cell-Killing Efficacy.

ACS applied bio materials

Avec: Nouf A Alsharif , Fajr A Aleisa , Guangyu Liu , Boon S Ooi , Niketan Patel , Timothy Ravasi , Jasmeen S Merzaban , Jürgen Kosel

Molecular basis of parental contributions to the behavioural tolerance of elevated pCO

Proceedings. Biological sciences

Avec: Alison A Monroe , Celia Schunter , Megan J Welch , Philip L Munday , Timothy Ravasi

Rapid evolution fuels transcriptional plasticity to ocean acidification.

Global change biology

Avec: Jingliang Kang , Ivan Nagelkerken , Jodie L Rummer , Riccardo Rodolfo-Metalpa , Philip L Munday , Timothy Ravasi , Celia Schunter

Can niche plasticity mediate species persistence under ocean acidification?

The Journal of animal ecology

Avec: Vittoria Cipriani , Silvan U Goldenberg , Sean D Connell , Timothy Ravasi , Ivan Nagelkerken

Transcriptomic responses in the nervous system and correlated behavioural changes of a cephalopod exposed to ocean acidification.

BMC genomics

Avec: Jodi T Thomas , Roger Huerlimann , Celia Schunter , Sue-Ann Watson , Philip L Munday , Timothy Ravasi

Out of shape: Ocean acidification simplifies coral reef architecture and reshuffles fish assemblages.

The Journal of animal ecology

Avec: Jamie Priest , Camilo M Ferreira , Philip L Munday , Amelia Roberts , Riccardo Rodolfo-Metalpa , Jodie L Rummer , Celia Schunter , Timothy Ravasi , Ivan Nagelkerken

Ecological generalism and physiology mediate fish biogeographic ranges under ocean warming.

Proceedings. Biological sciences

Avec: Chloe Hayes , Angus Mitchell , Camille Mellin , David J Booth , Timothy Ravasi , Ivan Nagelkerken

Species-specific molecular responses of wild coral reef fishes during a marine heatwave.

Science advances

Avec: Moisés A Bernal , Celia Schunter , Robert Lehmann , Damien J Lightfoot , Bridie J M Allan , Heather D Veilleux , Jodie L Rummer , Philip L Munday , Timothy Ravasi

The time course of molecular acclimation to seawater in a euryhaline fish.

Scientific reports

Avec: Lucrezia C Bonzi , Alison A Monroe , Robert Lehmann , Michael L Berumen , Timothy Ravasi , Celia Schunter

Plasticity to ocean warming is influenced by transgenerational, reproductive, and developmental exposure in a coral reef fish.

Evolutionary applications

Avec: Moisés A Bernal , Timothy Ravasi , Giverny G Rodgers , Philip L Munday , Jennifer M Donelson

Tissue-specific transcriptional response of post-larval clownfish to ocean warming.

The Science of the total environment

Avec: Billy Moore , Jeffrey Jolly , Michael Izumiyama , Erina Kawai , Timothy Ravasi , Taewoo Ryu

The chromosome-scale genome assembly of the yellowtail clownfish Amphiprion clarkii provides insights into the melanic pigmentation of anemonefish.

G3 (Bethesda, Md.)

Avec: Billy Moore , Marcela Herrera , Emma Gairin , Chengze Li , Saori Miura , Jeffrey Jolly , Manon Mercader , Michael Izumiyama , Erina Kawai , Timothy Ravasi , Vincent Laudet , Taewoo Ryu

The transcriptional landscape underlying larval development and metamorphosis in the Malabar grouper (

eLife

Avec: Roger Huerlimann , Natacha Roux , Ken Maeda , Polina Pilieva , Saori Miura , Hsiao-Chian Chen , Michael Izumiyama , Vincent Laudet , Timothy Ravasi

Réseau de co-auteurs

Celia Schunter 14 collaborations

Philip L Munday 11 collaborations

Jennifer M Donelson 5 collaborations

Taewoo Ryu 5 collaborations

Michael Izumiyama 5 collaborations

T Ravasi 4 collaborations

C Schunter 4 collaborations

Billy Moore 4 collaborations

Erina Kawai 4 collaborations

Vincent Laudet 4 collaborations

Jodie L Rummer 4 collaborations

Ivan Nagelkerken 4 collaborations

Roger Huerlimann 3 collaborations

David J Miller 3 collaborations

Lucrezia C Bonzi 3 collaborations

Moisés A Bernal 3 collaborations

Marcela Herrera 3 collaborations

Robert Lehmann 3 collaborations

Jeffrey Jolly 3 collaborations

Riccardo Rodolfo-Metalpa 3 collaborations

Jasmeen S Merzaban 3 collaborations

Jürgen Kosel 3 collaborations

Alison A Monroe 3 collaborations

L C Bonzi 2 collaborations

J M Donelson 2 collaborations

R K Spinks 2 collaborations

P L Munday 2 collaborations

Rachel K Spinks 2 collaborations

Sneha Suresh 2 collaborations

S Ramírez-Calero 2 collaborations

J R Paula 2 collaborations

E Otjacques 2 collaborations

R Rosa 2 collaborations

Damien J Lightfoot 2 collaborations

Michael L Berumen 2 collaborations

Aldo Isaac Martínez-Banderas 2 collaborations

Antonio Aires 2 collaborations

Julián A Moreno 2 collaborations

Boon S Ooi 2 collaborations

Aitziber L Cortajarena 2 collaborations

Saori Miura 2 collaborations

Cecília Pascelli 1 collaboration

Patrick W Laffy 1 collaboration

Emmanuelle Botté 1 collaboration

Marija Kupresanin 1 collaboration

Thomas Rattei 1 collaboration

Miguel Lurgi 1 collaboration

Nicole S Webster 1 collaboration

Benjamin Mason 1 collaboration

David C Hayward 1 collaboration

Aurelie Moya 1 collaboration

Ira Cooke 1 collaboration

Alanna Sorenson 1 collaboration

Ramona Brunner 1 collaboration

Natalia Andrade 1 collaboration

David G Bourne 1 collaboration

Patrick Schaeffer 1 collaboration

Mila Grinblat 1 collaboration

Nobuo Ueda 1 collaboration

Sen-Lin Tang 1 collaboration

Eldon E Ball 1 collaboration

Muhammad Shuaib 1 collaboration

Krishna Mohan Parsi 1 collaboration

Manjula Thimma 1 collaboration

Sabir Abdu Adroub 1 collaboration

Hideya Kawaji 1 collaboration

Loqmane Seridi 1 collaboration

Yanal Ghosheh 1 collaboration

Alexandre Fort 1 collaboration

Bodor Fallatah 1 collaboration

Piero Carninci 1 collaboration

Valerio Orlando 1 collaboration

Michael D Jarrold 1 collaboration

Stanley Kin Nok Chan 1 collaboration

Phillip Munday 1 collaboration

Graeme S Cumming 1 collaboration

Maja Adamska 1 collaboration

Michele L Barnes 1 collaboration

Jon Barnett 1 collaboration

David R Bellwood 1 collaboration

Joshua E Cinner 1 collaboration

Philippa J Cohen 1 collaboration

Katharina Fabricius 1 collaboration

R Quentin Grafton 1 collaboration

Alana Grech 1 collaboration

Georgina G Gurney 1 collaboration

Ove Hoegh-Guldberg 1 collaboration

Andrew S Hoey 1 collaboration

Mia O Hoogenboom 1 collaboration

Jacqueline Lau 1 collaboration

Catherine E Lovelock 1 collaboration

Ryan Lowe 1 collaboration

Tiffany H Morrison 1 collaboration

Peter J Mumby 1 collaboration

Martin Nakata 1 collaboration

John M Pandolfi 1 collaboration

Garry D Peterson 1 collaboration

Morgan S Pratchett 1 collaboration

Cynthia Riginos 1 collaboration

Britta Schaffelke 1 collaboration

Thomas Wernberg 1 collaboration

Shaun K Wilson 1 collaboration

Fang Liu 1 collaboration

Xin Wang 1 collaboration

Guangyi Wang 1 collaboration

Zhiyong Li 1 collaboration

Craig T Michell 1 collaboration

Hajime Ohyanagi 1 collaboration

Katsuhiko Mineta 1 collaboration

Sylvain Foret 1 collaboration

Manuel Aranda 1 collaboration

Takashi Gojobori 1 collaboration

Göran E Nilsson 1 collaboration

Alice Mirasole 1 collaboration

Salvatrice Vizzini 1 collaboration

Daniele Romeo 1 collaboration

Sandra Ramirez-Calero 1 collaboration

Rebecca J Fox 1 collaboration

Juan D Gaitán-Espitia 1 collaboration

Marta Quintanilla 1 collaboration

Jorge A Holguín-Lerma 1 collaboration

Claudia Lozano-Pedraza 1 collaboration

Francisco J Teran 1 collaboration

Jose E Perez 1 collaboration

Huoming Zhang 1 collaboration

Sandra Plaza-García 1 collaboration

Lorena Colás 1 collaboration

Pedro Ramos-Cabrer 1 collaboration

Nouf A Alsharif 1 collaboration

Fajr A Aleisa 1 collaboration

Guangyu Liu 1 collaboration

Niketan Patel 1 collaboration

Megan J Welch 1 collaboration

Jingliang Kang 1 collaboration

Vittoria Cipriani 1 collaboration

Silvan U Goldenberg 1 collaboration

Sean D Connell 1 collaboration

Jodi T Thomas 1 collaboration

Sue-Ann Watson 1 collaboration

Jamie Priest 1 collaboration

Camilo M Ferreira 1 collaboration

Amelia Roberts 1 collaboration

Chloe Hayes 1 collaboration

Angus Mitchell 1 collaboration

Camille Mellin 1 collaboration

David J Booth 1 collaboration

Bridie J M Allan 1 collaboration

Heather D Veilleux 1 collaboration

Giverny G Rodgers 1 collaboration

Emma Gairin 1 collaboration

Chengze Li 1 collaboration

Manon Mercader 1 collaboration

Natacha Roux 1 collaboration

Ken Maeda 1 collaboration

Polina Pilieva 1 collaboration

Hsiao-Chian Chen 1 collaboration