Draft genome sequence of the symbiotic Frankia sp. strain BMG5.30 isolated from root nodules of Coriaria myrtifolia in Tunisia.


Journal

Antonie van Leeuwenhoek
ISSN: 1572-9699
Titre abrégé: Antonie Van Leeuwenhoek
Pays: Netherlands
ID NLM: 0372625

Informations de publication

Date de publication:
Jan 2019
Historique:
received: 30 05 2018
accepted: 27 07 2018
pubmed: 3 8 2018
medline: 27 6 2019
entrez: 3 8 2018
Statut: ppublish

Résumé

Frankia sp. strain BMG5.30 was isolated from root nodules of a Coriaria myrtifolia seedling on soil collected in Tunisia and represents the second cluster 2 isolate. Frankia sp. strain BMG5.30 was able to re-infect C. myrtifolia generating root nodules. Here, we report its 5.8-Mbp draft genome sequence with a G + C content of 70.03% and 4509 candidate protein-encoding genes.

Identifiants

pubmed: 30069723
doi: 10.1007/s10482-018-1138-1
pii: 10.1007/s10482-018-1138-1
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

67-74

Subventions

Organisme : USDA National Institute of Food and Agriculture Hatch 022821
ID : 022821
Organisme : National Institute of Food and Agriculture
ID : 2015-67014-22849
Organisme : Directorate for Biological Sciences
ID : DBI-1229361

Auteurs

Abdellatif Gueddou (A)

Institut National des Sciences Appliquées et de Technologie, Université Carthage, Cente Urbain Nord, 676-1080, Tunis, Tunisia.
Laboratoire Microorganismes et Biomolécules Actives, Université Tunis El Manar (FST), 2092, Tunis, Tunisia.

Erik Swanson (E)

Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, 46 College Rd, Durham, NH, 03824-2617, USA.

Karima Hezbri (K)

Institut National des Sciences Appliquées et de Technologie, Université Carthage, Cente Urbain Nord, 676-1080, Tunis, Tunisia.
Laboratoire Microorganismes et Biomolécules Actives, Université Tunis El Manar (FST), 2092, Tunis, Tunisia.

Imen Nouioui (I)

Institut National des Sciences Appliquées et de Technologie, Université Carthage, Cente Urbain Nord, 676-1080, Tunis, Tunisia.
Laboratoire Microorganismes et Biomolécules Actives, Université Tunis El Manar (FST), 2092, Tunis, Tunisia.

Amir Ktari (A)

Institut National des Sciences Appliquées et de Technologie, Université Carthage, Cente Urbain Nord, 676-1080, Tunis, Tunisia.
Laboratoire Microorganismes et Biomolécules Actives, Université Tunis El Manar (FST), 2092, Tunis, Tunisia.

Stephen Simpson (S)

Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, 46 College Rd, Durham, NH, 03824-2617, USA.

Krystalynne Morris (K)

Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, 46 College Rd, Durham, NH, 03824-2617, USA.

W Kelley Thomas (W)

Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, 46 College Rd, Durham, NH, 03824-2617, USA.

Faten Ghodhbane-Gtari (F)

Institut National des Sciences Appliquées et de Technologie, Université Carthage, Cente Urbain Nord, 676-1080, Tunis, Tunisia.
Laboratoire Microorganismes et Biomolécules Actives, Université Tunis El Manar (FST), 2092, Tunis, Tunisia.

Maher Gtari (M)

Institut National des Sciences Appliquées et de Technologie, Université Carthage, Cente Urbain Nord, 676-1080, Tunis, Tunisia. maher.gtari@insat.rnu.tn.

Louis S Tisa (LS)

Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, 46 College Rd, Durham, NH, 03824-2617, USA. louis.tisa@unh.edu.

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Classifications MeSH