Second update of the International Registry of HLA Epitopes. I. The HLA-ABC Epitope Database.


Journal

Human immunology
ISSN: 1879-1166
Titre abrégé: Hum Immunol
Pays: United States
ID NLM: 8010936

Informations de publication

Date de publication:
Feb 2019
Historique:
received: 15 08 2018
revised: 11 11 2018
accepted: 16 11 2018
pubmed: 21 11 2018
medline: 27 6 2019
entrez: 21 11 2018
Statut: ppublish

Résumé

The International Registry of HLA Epitopes (http://www.epregistry.com.br) is a website-based resource for HLA epitopes important in transplant rejection and platelet transfusion refractoriness. Its primary goal is to document epitopes that are verified experimentally with specific antibodies. Such epitopes can be defined by single eplets and by eplets paired with certain polymorphic residues within a 15-Å radius, the dimension of the corresponding structural epitope. This report is an update of the HLA-ABC repertoire including descriptions of 72 antibody-verifications of epitopes defined by eplets and/or eplet pairs. The newly updated version 2.0 EpRegistry shows also the polymorphic residue compositions of structural epitopes corresponding to eplets shared between groups of alleles. At present, 151 eplets have not been antibody-verified, and we ranked them with a so-called ElliPro score as a potential predictor of immunogenicity. Sixty eplets with low ElliPro scores might be considered non-epitopes incapable of inducing specific antibodies.

Identifiants

pubmed: 30458204
pii: S0198-8859(18)30665-7
doi: 10.1016/j.humimm.2018.11.007
pii:
doi:

Substances chimiques

HLA Antigens 0
Immunodominant Epitopes 0
Isoantibodies 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

103-106

Informations de copyright

Copyright © 2018. Published by Elsevier Inc.

Auteurs

R J Duquesnoy (RJ)

Thomas E. Starzl Transplantation Institute, University of Pittsburgh Medical Center, Pittsburgh, PA, USA.

M Marrari (M)

Thomas E. Starzl Transplantation Institute, University of Pittsburgh Medical Center, Pittsburgh, PA, USA.

M S Marroquim (MS)

Department of Informatics and Statistics, Federal University of Piauı, Teresina, Brazil.

A G Borges (AG)

Department of Informatics and Statistics, Federal University of Piauı, Teresina, Brazil.

L C D da Mata Sousa (LCD)

Department of Informatics and Statistics, Federal University of Piauı, Teresina, Brazil.

A Socorro (A)

Department of Informatics and Statistics, Federal University of Piauı, Teresina, Brazil.

S J H do Monte (SJH)

Immunogenetics and Molecular Biology Laboratory, Federal University of Piauı, Teresina, Brazil.

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Classifications MeSH