Species boundaries in the Trichophyton mentagrophytes / T. interdigitale species complex.


Journal

Medical mycology
ISSN: 1460-2709
Titre abrégé: Med Mycol
Pays: England
ID NLM: 9815835

Informations de publication

Date de publication:
01 Aug 2019
Historique:
received: 28 08 2018
revised: 28 09 2018
accepted: 05 10 2018
pubmed: 22 11 2018
medline: 20 6 2020
entrez: 22 11 2018
Statut: ppublish

Résumé

The fungi Trichophyton mentagrophytes and T. interdigitale are closely related species, causing superficial infections in humans and other mammals. The status of these taxa is a field of long-lasting debates. To clarify their phylogenetic relationships within the genus Trichophyton and sharpen the species boundaries, we performed sequencing of four T. mentagrophytes genomes and also evaluated three previously published multilocus data sets. We performed computational species delimitation analysis on all available in GenBank internal transcribed spacer region (ITS) sequences of Trichophyton spp. Phylogenomic data, phylogenetic network, and species delimitation analyses implied that T. mentagrophytes and T. interdigitale belong to the same phylogenetic species. However, we argue that taxonomic status quo should be retained, from the perspective of epidemiological data and the principle of taxonomic stability. Since there is a correlation between ITS genotype and epidemiological source of an isolate, restriction of T. interdigitale to purely anthropophilic ITS genotypes seems to be reasonable.

Identifiants

pubmed: 30462248
pii: 5194288
doi: 10.1093/mmy/myy115
doi:

Substances chimiques

DNA, Fungal 0
DNA, Ribosomal Spacer 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

781-789

Informations de copyright

© The Author(s) 2018. Published by Oxford University Press on behalf of The International Society for Human and Animal Mycology.

Auteurs

Ivan M Pchelin (IM)

Kashkin Research Institute of Medical Mycology, North-Western State Medical University named after I.I. Mechnikov, St. Petersburg, Russia.
Department of Medical Microbiology, North-Western State Medical University named after I.I. Mechnikov, St. Petersburg, Russia.

Daniil V Azarov (DV)

Department of Epidemiology, Parasitology and Disinfectology, North-Western State Medical University named after I.I. Mechnikov, St. Petersburg, Russia.

Maria A Churina (MA)

City Hospital No. 40, St. Petersburg, Russia.
Clinical Infectious Diseases Hospital named after S.P. Botkin, St. Petersburg, Russia.

Sergey G Scherbak (SG)

City Hospital No. 40, St. Petersburg, Russia.
Medical Faculty, Saint Petersburg State University, St. Petersburg, Russia.

Svetlana V Apalko (SV)

City Hospital No. 40, St. Petersburg, Russia.

Natalya V Vasilyeva (NV)

Kashkin Research Institute of Medical Mycology, North-Western State Medical University named after I.I. Mechnikov, St. Petersburg, Russia.
Department of Medical Microbiology, North-Western State Medical University named after I.I. Mechnikov, St. Petersburg, Russia.

Anastasia E Taraskina (AE)

Kashkin Research Institute of Medical Mycology, North-Western State Medical University named after I.I. Mechnikov, St. Petersburg, Russia.

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Classifications MeSH