Species boundaries in the Trichophyton mentagrophytes / T. interdigitale species complex.
Trichophyton interdigitale
Trichophyton mentagrophytes
phylogeny
taxonomy
whole genome sequencing
Journal
Medical mycology
ISSN: 1460-2709
Titre abrégé: Med Mycol
Pays: England
ID NLM: 9815835
Informations de publication
Date de publication:
01 Aug 2019
01 Aug 2019
Historique:
received:
28
08
2018
revised:
28
09
2018
accepted:
05
10
2018
pubmed:
22
11
2018
medline:
20
6
2020
entrez:
22
11
2018
Statut:
ppublish
Résumé
The fungi Trichophyton mentagrophytes and T. interdigitale are closely related species, causing superficial infections in humans and other mammals. The status of these taxa is a field of long-lasting debates. To clarify their phylogenetic relationships within the genus Trichophyton and sharpen the species boundaries, we performed sequencing of four T. mentagrophytes genomes and also evaluated three previously published multilocus data sets. We performed computational species delimitation analysis on all available in GenBank internal transcribed spacer region (ITS) sequences of Trichophyton spp. Phylogenomic data, phylogenetic network, and species delimitation analyses implied that T. mentagrophytes and T. interdigitale belong to the same phylogenetic species. However, we argue that taxonomic status quo should be retained, from the perspective of epidemiological data and the principle of taxonomic stability. Since there is a correlation between ITS genotype and epidemiological source of an isolate, restriction of T. interdigitale to purely anthropophilic ITS genotypes seems to be reasonable.
Identifiants
pubmed: 30462248
pii: 5194288
doi: 10.1093/mmy/myy115
doi:
Substances chimiques
DNA, Fungal
0
DNA, Ribosomal Spacer
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
781-789Informations de copyright
© The Author(s) 2018. Published by Oxford University Press on behalf of The International Society for Human and Animal Mycology.