FisOmics: A portal of fish genomic resources.

Animals Chromosomes Crustacea / genetics DNA Barcoding, Taxonomic Databases, Genetic Datasets as Topic Fish Proteins / genetics Fishes / genetics Hypoxia / genetics Internet Microsatellite Repeats Mollusca / genetics User-Computer Interface
Bioinformatics FisOmics Fish genomics HPC India Portal Relational database

Journal

Genomics
ISSN: 1089-8646
Titre abrégé: Genomics
Pays: United States
ID NLM: 8800135

Informations de publication

Date de publication:
12 2019
Historique:
received: 31 03 2018
revised: 05 11 2018
accepted: 02 01 2019
pubmed: 7 1 2019
medline: 25 4 2020
entrez: 7 1 2019
Statut: ppublish

Résumé

An online portal, accessible at URL: http://mail.nbfgr.res.in/FisOmics/, was developed that features different genomic databases and tools. The portal, named as FisOmics, acts as a platform for sharing fish genomic sequences and related information in addition to facilitating the access of high-performance computational resources for genome and proteome data analyses. It provides the ability for quarrying, analysing and visualizing genomic sequences and related information. The featured databases in FisOmics are in the World Wide Web domain already. The aim to develop portal was to provide a nodal point to access the featured databases and work conveniently. Presently, FisOmics includes databases on barcode sequences, microsatellite markers, mitogenome sequences, hypoxia-responsive genes and karyology of fishes. Besides, it has a link to other molecular resources and reports on the on-going activities and research achievements.

Identifiants

DOI: 10.1016/j.ygeno.2019.01.003 PMID: 30611878
pubmed: 30611878
pii: S0888-7543(18)30207-6
doi: 10.1016/j.ygeno.2019.01.003
pii:
doi:

Substances chimiques

Fish Proteins 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1923-1928

Informations de copyright

Copyright © 2019 Elsevier Inc. All rights reserved.

Auteurs

Ajey Kumar Pathak (AK)

Molecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Canal Ring Road, P.O.- Dilkusha, Lucknow 226 002, India.

Iliyas Rashid (I)

Molecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Canal Ring Road, P.O.- Dilkusha, Lucknow 226 002, India.

Naresh Sahebrao Nagpure (NS)

Fish Genetics and Biotechnology Division, ICAR-Central Institute of Fisheries Education, Panch Marg, Off Yari Road, Mumbai 400 061, India.

Ravindra Kumar (R)

Molecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Canal Ring Road, P.O.- Dilkusha, Lucknow 226 002, India. Electronic address: Ravindra.kumar1@icar.gov.in.

Rameshwar Pati (R)

Molecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Canal Ring Road, P.O.- Dilkusha, Lucknow 226 002, India.

Mahender Singh (M)

Molecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Canal Ring Road, P.O.- Dilkusha, Lucknow 226 002, India.

S Murali (S)

Molecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Canal Ring Road, P.O.- Dilkusha, Lucknow 226 002, India.

Basdeo Kushwaha (B)

Molecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Canal Ring Road, P.O.- Dilkusha, Lucknow 226 002, India.

Dinesh Kumar (D)

Centre for Agricultural Bioinformatics (CABin), ICAR-Indian Agricultural Statistics Research Institute, Library Avenue, Pusa, New Delhi 110012, India.

Anil Rai (A)

Centre for Agricultural Bioinformatics (CABin), ICAR-Indian Agricultural Statistics Research Institute, Library Avenue, Pusa, New Delhi 110012, India.

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Classifications MeSH

questionsmedicales.fr › Eucaryotes › Animaux › FisOmics: A portal of fish genomic resources.
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Chromosomes › FisOmics: A portal of fish genomic resources.
questionsmedicales.fr › Eucaryotes › Animaux › Invertébrés › Arthropodes › Crustacea › FisOmics: A portal of fish genomic resources.
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de séquence › Analyse de séquence d'ADN › Codage à barres de l'ADN pour la taxonomie › FisOmics: A portal of fish genomic resources.
questionsmedicales.fr › Sciences de l'information › Mémorisation et recherche des informations › Bases de données comme sujet › Bases de données factuelles › Bases de données génétiques › FisOmics: A portal of fish genomic resources.
questionsmedicales.fr › Environnement et santé publique › Santé publique › Méthodes épidémiologiques › Collecte de données › Jeux de données comme sujet › FisOmics: A portal of fish genomic resources.
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Protéines de poisson › FisOmics: A portal of fish genomic resources.
questionsmedicales.fr › Eucaryotes › Animaux › Chordés › Vertébrés › Poissons › FisOmics: A portal of fish genomic resources.
questionsmedicales.fr › États, signes et symptômes pathologiques › Signes et symptômes › Signes et symptômes respiratoires › Hypoxie › FisOmics: A portal of fish genomic resources.
questionsmedicales.fr › Sciences de l'information › Méthodologies informatiques › Systèmes informatiques › Réseaux de communication entre ordinateurs › Internet › FisOmics: A portal of fish genomic resources.
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Composants de génome › Séquences répétées en tandem › Répétitions microsatellites › FisOmics: A portal of fish genomic resources.
questionsmedicales.fr › Eucaryotes › Animaux › Invertébrés › Mollusca › FisOmics: A portal of fish genomic resources.
questionsmedicales.fr › Sciences de l'information › Méthodologies informatiques › Logiciel › Interface utilisateur › FisOmics: A portal of fish genomic resources.