Microbial Community Succession and Nutrient Cycling Responses following Perturbations of Experimental Saltwater Aquaria.
16S rRNA gene
bacteria
community succession
metabarcoding
saltwater aquarium
water chemistry
Journal
mSphere
ISSN: 2379-5042
Titre abrégé: mSphere
Pays: United States
ID NLM: 101674533
Informations de publication
Date de publication:
20 02 2019
20 02 2019
Historique:
entrez:
22
2
2019
pubmed:
23
2
2019
medline:
9
4
2019
Statut:
epublish
Résumé
Although aquaria are common features of homes and other buildings, little is known about how environmental perturbations (i.e., tank cleaning, water changes, addition of habitat features) impact the diversity and succession of aquarium microbial communities. In this study, we sought to evaluate the hypotheses that newly established aquaria show clear microbial successional patterns over time and that common marine aquarium-conditioning practices, such as the addition of ocean-derived "live rocks" (defined as any "dead coral skeleton covered with crustose coralline algae" transferred into an aquarium from open ocean habitats) impact the diversity of microbial populations as well as nitrogen cycling in aquaria. We collected water chemistry data alongside water and sediment samples from two independent and newly established saltwater aquaria over a 3-month period. Microbial communities in samples were assessed by DNA extraction, amplification of the 16S rRNA gene, and Illumina MiSeq sequencing. Our results showed clear and replicable patterns of community succession in both aquaria, with the existence of multiple stable states for aquarium microbial assemblages. Notably, our results show that changes in aquarium microbial communities do not always correlate with water chemistry measurements and that operational taxonomic unit (OTU)-level patterns relevant to nitrogen cycling were not reported as statistically significant. Overall, our results demonstrate that aquarium perturbations have a substantial impact on microbial community profiles of aquarium water and sediment and that the addition of live rocks improves nutrient cycling by shifting aquarium communities toward a more typical saltwater assemblage of microbial taxa.
Identifiants
pubmed: 30787117
pii: 4/1/e00043-19
doi: 10.1128/mSphere.00043-19
pmc: PMC6382968
pii:
doi:
Substances chimiques
Ammonium Compounds
0
DNA, Archaeal
0
DNA, Bacterial
0
Nitrates
0
Nitrites
0
RNA, Ribosomal, 16S
0
Water
059QF0KO0R
Banques de données
figshare
['10.6084/m9.figshare.1427397']
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Informations de copyright
Copyright © 2019 Bik et al.
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