Draft Genome of Burkholderia cenocepacia TAtl-371, a Strain from the Burkholderia cepacia Complex Retains Antagonism in Different Carbon and Nitrogen Sources.
Antibiosis
Bacteriocins
/ genetics
Burkholderia cenocepacia
/ genetics
Burkholderia cepacia complex
Carbon
/ metabolism
Chitinases
/ genetics
Genome, Bacterial
Solanum lycopersicum
/ microbiology
Mexico
Nitrogen
/ metabolism
Rhizosphere
Sequence Analysis, DNA
Siderophores
/ genetics
Soil Microbiology
Journal
Current microbiology
ISSN: 1432-0991
Titre abrégé: Curr Microbiol
Pays: United States
ID NLM: 7808448
Informations de publication
Date de publication:
May 2019
May 2019
Historique:
received:
23
10
2018
accepted:
20
02
2019
pubmed:
2
3
2019
medline:
3
8
2019
entrez:
2
3
2019
Statut:
ppublish
Résumé
Burkholderia cenocepacia TAtl-371 was isolated from the rhizosphere of a tomato plant growing in Atlatlahucan, Morelos, Mexico. This strain exhibited a broad antimicrobial spectrum against bacteria, yeast, and fungi. Here, we report and describe the improved, high-quality permanent draft genome of B. cenocepacia TAtl-371, which was sequenced using a combination of PacBio RS and PacBio RS II sequencing methods. The 7,496,106 bp genome of the TAtl-371 strain is arranged in three scaffolds, contains 6722 protein-coding genes, and 99 RNA only-encoding genes. Genome analysis revealed genes related to biosynthesis of antimicrobials such as non-ribosomal peptides, siderophores, chitinases, and bacteriocins. Moreover, analysis of bacterial growth on different carbon and nitrogen sources shows that the strain retains its antimicrobial ability.
Identifiants
pubmed: 30820638
doi: 10.1007/s00284-019-01657-0
pii: 10.1007/s00284-019-01657-0
doi:
Substances chimiques
Bacteriocins
0
Siderophores
0
Carbon
7440-44-0
Chitinases
EC 3.2.1.14
Nitrogen
N762921K75
Types de publication
Journal Article
Langues
eng
Pagination
566-574Subventions
Organisme : Office of Science
ID : DE-AC02-05CH11231
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