Genomic stratification and liquid biopsy in a rare adrenocortical carcinoma (ACC) case, with dual lung metastases.


Journal

Cold Spring Harbor molecular case studies
ISSN: 2373-2873
Titre abrégé: Cold Spring Harb Mol Case Stud
Pays: United States
ID NLM: 101660017

Informations de publication

Date de publication:
04 2019
Historique:
received: 30 11 2018
accepted: 11 02 2019
entrez: 3 4 2019
pubmed: 3 4 2019
medline: 9 4 2020
Statut: epublish

Résumé

Adrenocortical carcinoma is a rare malignancy with a poor prognosis and few treatment options. Molecular characterization of this cancer remains limited. We present a case of an adrenocortical carcinoma (ACC) in a 37-yr-old female, with dual lung metastases identified 1 yr following commencement of adjuvant mitotane therapy. As standard therapeutic regimens are often unsuccessful in ACC, we undertook a comprehensive genomic study into this case to identify treatment options and monitor disease progress. We performed targeted and whole-genome sequencing of germline, primary tumor, and both metastatic tumors from this patient and monitored recurrence over 2 years using liquid biopsy for ctDNA and steroid hormone measurements. Sequencing revealed the primary and metastatic tumors were hyperhaploid, with extensive loss of heterozygosity but few structural rearrangements. Loss-of-function mutations were identified in

Identifiants

pubmed: 30936196
pii: mcs.a003764
doi: 10.1101/mcs.a003764
pmc: PMC6549567
pii:
doi:

Types de publication

Case Reports Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

© 2019 McCabe et al.; Published by Cold Spring Harbor Laboratory Press.

Références

J Mol Diagn. 2017 Jan;19(1):24-34
pubmed: 27863260
Bioinformatics. 2015 Nov 15;31(22):3673-5
pubmed: 26163694
Int J Cancer. 2018 Aug 15;143(4):944-957
pubmed: 29516499
Sci Transl Med. 2014 Feb 19;6(224):224ra24
pubmed: 24553385
Eur J Endocrinol. 2010 Feb;162(2):349-56
pubmed: 19903796
Sci Rep. 2017 Oct 18;7(1):13488
pubmed: 29044214
Kidney Cancer. 2017 Jul 26;1(1):65-70
pubmed: 30334006
N Engl J Med. 2012 Jun 7;366(23):2189-97
pubmed: 22551107
Lancet. 2010 Aug 28;376(9742):687-97
pubmed: 20728210
Source Code Biol Med. 2016 Dec 15;11:13
pubmed: 27999612
Cell Res. 2009 Jul;19(7):802-15
pubmed: 19532122
Bioinformatics. 2009 Jul 15;25(14):1754-60
pubmed: 19451168
Nat Biotechnol. 2013 Nov;31(11):1023-31
pubmed: 24142049
Curr Oncol. 2017 Aug;24(4):e316-e322
pubmed: 28874901
Lancet Oncol. 2015 Apr;16(4):426-35
pubmed: 25795408
Cell Metab. 2016 Jan 12;23(1):27-47
pubmed: 26771115
J Am Coll Surg. 2018 Jun;226(6):988-995
pubmed: 29428231
BMC Urol. 2015 May 27;15:43
pubmed: 26013141
N Engl J Med. 2013 Mar 28;368(13):1199-209
pubmed: 23484797
Oncotarget. 2017 Jan 31;8(5):7452-7463
pubmed: 27980218
Int J Cancer. 2018 Jul 1;143(1):199-211
pubmed: 29411361
Cancer Res. 2015 Jun 1;75(11):2139-45
pubmed: 25977340
Mol Cancer. 2018 Jan 17;17(1):8
pubmed: 29343260
Front Cell Dev Biol. 2015 Jul 03;3:45
pubmed: 26191527
Ann Oncol. 2012 Oct;23 Suppl 7:vii131-8
pubmed: 22997446
Cell. 2017 Feb 9;168(4):644-656
pubmed: 28187286
Endocr Relat Cancer. 2018 Mar;25(3):L13-L17
pubmed: 29212777
Eur J Endocrinol. 2017 Nov;177(5):439-444
pubmed: 28819017
Cell Commun Signal. 2018 Jun 8;16(1):27
pubmed: 29884238
Protein Cell. 2018 Feb;9(2):216-237
pubmed: 28748451
J Oncol. 2018 Dec 4;2018:6214838
pubmed: 30631356
PLoS One. 2012;7(6):e38287
pubmed: 22675538
J Endocrinol Invest. 2018 May;41(5):499-507
pubmed: 29080966
J Clin Endocrinol Metab. 2017 Oct 1;102(10):3611-3615
pubmed: 28973495
PLoS Comput Biol. 2016 Apr 21;12(4):e1004873
pubmed: 27100738
Bioinformatics. 2016 Apr 15;32(8):1220-2
pubmed: 26647377
Biochim Biophys Acta Rev Cancer. 2017 Aug;1868(1):7-15
pubmed: 28110019
Medicine (Baltimore). 2016 Sep;95(36):e4756
pubmed: 27603373
Oncotarget. 2017 Oct 2;8(51):88257-88258
pubmed: 29179432
Int J Cancer. 2002 Sep 20;101(3):248-52
pubmed: 12209975
Histopathology. 2007 Aug;51(2):239-45
pubmed: 17593212
J Surg Oncol. 2017 Sep;116(3):427-433
pubmed: 28672049
Cell Res. 2018 Mar;28(3):265-280
pubmed: 29219147
N Engl J Med. 2018 May 10;378(19):1789-1801
pubmed: 29658430
Molecules. 2017 Aug 16;22(8):
pubmed: 28813011
Ann Surg Oncol. 2018 Mar;25(3):792-800
pubmed: 29214451
J Clin Endocrinol Metab. 2012 Oct;97(10):3495-503
pubmed: 22837187
J Gastrointest Oncol. 2017 Oct;8(5):858-866
pubmed: 29184690
Cancer Res. 2013 May 15;73(10):3029-40
pubmed: 23475934
BMB Rep. 2011 May;44(5):317-22
pubmed: 21615986
Eur J Endocrinol. 2014 Feb 04;170(3):385-91
pubmed: 24347427
Mol Cell Biol. 2006 Mar;26(6):2297-308
pubmed: 16508005
Oncologist. 2017 Sep;22(9):1102-1106
pubmed: 28559412
Bioinformatics. 2019 Jan 1;35(1):122-125
pubmed: 30561546
Mol Cell Endocrinol. 2018 Oct 15;474:57-64
pubmed: 29474877
Nat Commun. 2018 Mar 1;9(1):896
pubmed: 29497091
Oncol Lett. 2012 Dec;4(6):1151-1157
pubmed: 23226794
Endocr Pathol. 2017 Jun;28(2):95-102
pubmed: 28271381
Eur J Endocrinol. 2008 Jun;158(6):911-9
pubmed: 18505909
Curr Protoc Bioinformatics. 2013;43:11.10.1-11.10.33
pubmed: 25431634
J Clin Endocrinol Metab. 2013 Jan;98(1):E119-25
pubmed: 23175693
Oncotarget. 2016 Nov 29;7(48):79292-79304
pubmed: 27764813
J Clin Endocrinol Metab. 2013 Dec;98(12):4551-64
pubmed: 24081734
Nat Commun. 2017 Jun 06;8:15180
pubmed: 28585546
Hum Mutat. 2008 Feb;29(2):332
pubmed: 18205192
Nucleic Acids Res. 2013 Sep;41(16):7615-24
pubmed: 23793816
Cancer Med. 2018 Apr;7(4):1440-1449
pubmed: 29532999
Bioinformatics. 2012 Jul 15;28(14):1811-7
pubmed: 22581179
Mol Cell Endocrinol. 2012 Mar 31;351(1):66-70
pubmed: 22209747
Rev Hosp Clin Fac Med Sao Paulo. 2002 Nov-Dec;57(6):251-6
pubmed: 12612756
Nucleic Acids Res. 2016 Jun 20;44(11):e108
pubmed: 27060149
J Cancer. 2017 Sep 20;8(17):3430-3440
pubmed: 29151926
PLoS Comput Biol. 2013;9(7):e1003153
pubmed: 23874191

Auteurs

Mark J McCabe (MJ)

Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.
Hormones and Cancer Group, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.
Faculty of Medicine, St Vincent's Clinical School, UNSW Australia, Sydney, New South Wales 2010, Australia.

Mark Pinese (M)

Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.
Cancer Research Division, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.

Chia-Ling Chan (CL)

Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.

Nisa Sheriff (N)

Hormones and Cancer Group, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.
Department of Endocrinology, St Vincent's Hospital, Sydney, New South Wales 2010, Australia.

Tanya J Thompson (TJ)

Hormones and Cancer Group, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.

John Grady (J)

Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.

Marie Wong (M)

Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.

Marie-Emilie A Gauthier (MA)

Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.

Clare Puttick (C)

Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.

Velimir Gayevskiy (V)

Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.

Elektra Hajdu (E)

Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.

Stephen Q Wong (SQ)

Molecular and Translational Genomics Laboratory, Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.

Wade Barrett (W)

Department of Anatomical Pathology, St Vincent's Hospital, Sydney, New South Wales 2010, Australia.

Peter Earls (P)

Department of Anatomical Pathology, St Vincent's Hospital, Sydney, New South Wales 2010, Australia.

Robyn Lukeis (R)

Department of Anatomical Pathology, St Vincent's Hospital, Sydney, New South Wales 2010, Australia.

Yuen Y Cheng (YY)

Asbestos Diseases Research Institute, The University of Sydney, Sydney, New South Wales 2139, Australia.

Ruby C Y Lin (RCY)

Asbestos Diseases Research Institute, The University of Sydney, Sydney, New South Wales 2139, Australia.
Centre for Infectious Diseases and Microbiology, The Westmead Institute for Medical Research, Westmead, New South Wales 2145, Australia.

David M Thomas (DM)

Cancer Research Division, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.

D Neil Watkins (DN)

Cancer Research Division, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.

Marcel E Dinger (ME)

Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.
Faculty of Medicine, St Vincent's Clinical School, UNSW Australia, Sydney, New South Wales 2010, Australia.

Ann I McCormack (AI)

Hormones and Cancer Group, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.
Faculty of Medicine, St Vincent's Clinical School, UNSW Australia, Sydney, New South Wales 2010, Australia.
Department of Endocrinology, St Vincent's Hospital, Sydney, New South Wales 2010, Australia.

Mark J Cowley (MJ)

Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Darlinghurst, New South Wales 2010, Australia.
Faculty of Medicine, St Vincent's Clinical School, UNSW Australia, Sydney, New South Wales 2010, Australia.
Computational Biology Group, Children's Cancer Institute, Kensington, New South Wales 2031, Australia.

Articles similaires

Genome, Chloroplast Phylogeny Genetic Markers Base Composition High-Throughput Nucleotide Sequencing

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C

Classifications MeSH