Variants in KIAA0825 underlie autosomal recessive postaxial polydactyly.


Journal

Human genetics
ISSN: 1432-1203
Titre abrégé: Hum Genet
Pays: Germany
ID NLM: 7613873

Informations de publication

Date de publication:
Jun 2019
Historique:
received: 29 01 2019
accepted: 14 03 2019
pubmed: 15 4 2019
medline: 25 6 2019
entrez: 15 4 2019
Statut: ppublish

Résumé

Postaxial polydactyly (PAP) is a common limb malformation that often leads to cosmetic and functional complications. Molecular evaluation of polydactyly can serve as a tool to elucidate genetic and signaling pathways that regulate limb development, specifically, the anterior-posterior specification of the limb. To date, only five genes have been identified for nonsyndromic PAP: FAM92A, GLI1, GLI3, IQCE and ZNF141. In this study, two Pakistani multiplex consanguineous families with autosomal recessive nonsyndromic PAP were clinically and molecularly evaluated. From both pedigrees, a DNA sample from an affected member underwent exome sequencing. In each family, we identified a segregating frameshift (c.591dupA [p.(Q198Tfs*21)]) and nonsense variant (c.2173A > T [p.(K725*)]) in KIAA0825 (also known as C5orf36). Although KIAA0825 encodes a protein of unknown function, it has been demonstrated that its murine ortholog is expressed during limb development. Our data contribute to the establishment of a catalog of genes important in limb patterning, which can aid in diagnosis and obtaining a better understanding of the biology of polydactyly.

Identifiants

pubmed: 30982135
doi: 10.1007/s00439-019-02000-0
pii: 10.1007/s00439-019-02000-0
pmc: PMC6724712
mid: NIHMS1024056
doi:

Substances chimiques

Intracellular Signaling Peptides and Proteins 0
KIAA0825 protein, human 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

593-600

Subventions

Organisme : NHGRI NIH HHS
ID : U24 HG008956
Pays : United States
Organisme : NHGRI NIH HHS
ID : UM1 HG006493
Pays : United States

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Auteurs

Irfan Ullah (I)

Department of Biochemistry, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, Pakistan.

Naseebullah Kakar (N)

Institute of Human Genetics, University of Ulm, Ulm, Germany.
Department of Biotechnology, Balochistan University of Information Technology, Engineering, and Management Sciences, Quetta, Pakistan.

Isabelle Schrauwen (I)

Department of Molecular and Human Genetics, Center for Statistical Genetics, Baylor College of Medicine, 1 Baylor Plaza 700D, Houston, TX, 77030, USA.

Shabir Hussain (S)

Department of Biochemistry, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, Pakistan.
Department of Molecular and Human Genetics, Center for Statistical Genetics, Baylor College of Medicine, 1 Baylor Plaza 700D, Houston, TX, 77030, USA.

Imen Chakchouk (I)

Department of Molecular and Human Genetics, Center for Statistical Genetics, Baylor College of Medicine, 1 Baylor Plaza 700D, Houston, TX, 77030, USA.

Khurram Liaqat (K)

Department of Molecular and Human Genetics, Center for Statistical Genetics, Baylor College of Medicine, 1 Baylor Plaza 700D, Houston, TX, 77030, USA.
Department of Biotechnology, Faculty of Biological Sciences, Quaid-i-Azam University Islamabad, Islamabad, Pakistan.

Anushree Acharya (A)

Department of Molecular and Human Genetics, Center for Statistical Genetics, Baylor College of Medicine, 1 Baylor Plaza 700D, Houston, TX, 77030, USA.

Naveed Wasif (N)

Institute of Human Genetics, University of Ulm, Ulm, Germany.
Institute of Molecular Biology and Biotechnology (IMBB), The University of Lahore, Lahore, Pakistan.

Regie Lyn P Santos-Cortez (RLP)

Department of Molecular and Human Genetics, Center for Statistical Genetics, Baylor College of Medicine, 1 Baylor Plaza 700D, Houston, TX, 77030, USA.

Saadullah Khan (S)

Department of Biotechnology and Genetic Engineering, Kohat University of Science and Technology, Kohat, Pakistan.

Abdul Aziz (A)

Department of Biochemistry, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, Pakistan.
Department of Computer Science and Bioinformatics, Khushal Khan Khattak University, Karak, Pakistan.

Kwanghyuk Lee (K)

Department of Molecular and Human Genetics, Center for Statistical Genetics, Baylor College of Medicine, 1 Baylor Plaza 700D, Houston, TX, 77030, USA.

Julien Couthouis (J)

Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA.

Denise Horn (D)

Institute for Medical Genetics and Human Genetics, Charité Universitätsmedizin Berlin, Berlin, Germany.

Bjørt K Kragesteen (BK)

Institute for Medical Genetics and Human Genetics, Charité Universitätsmedizin Berlin, Berlin, Germany.

Malte Spielmann (M)

Institute for Medical Genetics and Human Genetics, Charité Universitätsmedizin Berlin, Berlin, Germany.

Holger Thiele (H)

Cologne Center for Genomics (CCG), Universitat zu Koln, Cologne, Germany.

Deborah A Nickerson (DA)

Department of Genome Sciences, University of Washington, Seattle, USA.

Michael J Bamshad (MJ)

Department of Genome Sciences, University of Washington, Seattle, USA.
Department of Pediatrics, University of Washington, Seattle, WA, USA.

Aaron D Gitler (AD)

Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA.

Jamil Ahmad (J)

Department of Biotechnology, Balochistan University of Information Technology, Engineering, and Management Sciences, Quetta, Pakistan.

Muhammad Ansar (M)

Department of Biochemistry, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, Pakistan.

Guntram Borck (G)

Institute of Human Genetics, University of Ulm, Ulm, Germany.

Wasim Ahmad (W)

Department of Biochemistry, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, Pakistan.

Suzanne M Leal (SM)

Department of Molecular and Human Genetics, Center for Statistical Genetics, Baylor College of Medicine, 1 Baylor Plaza 700D, Houston, TX, 77030, USA. sleal@bcm.edu.

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