Epigenetics and transcription regulation during eukaryotic diversification: the saga of TFIID.


Journal

Genes & development
ISSN: 1549-5477
Titre abrégé: Genes Dev
Pays: United States
ID NLM: 8711660

Informations de publication

Date de publication:
01 08 2019
Historique:
pubmed: 28 5 2019
medline: 11 9 2019
entrez: 25 5 2019
Statut: ppublish

Résumé

The basal transcription factor TFIID is central for RNA polymerase II-dependent transcription. Human TFIID is endowed with chromatin reader and DNA-binding domains and protein interaction surfaces. Fourteen TFIID TATA-binding protein (TBP)-associated factor (TAF) subunits assemble into the holocomplex, which shares subunits with the Spt-Ada-Gcn5-acetyltransferase (SAGA) coactivator. Here, we discuss the structural and functional evolution of TFIID and its divergence from SAGA. Our orthologous tree and domain analyses reveal dynamic gains and losses of epigenetic readers, plant-specific functions of TAF1 and TAF4, the HEAT2-like repeat in TAF2, and, importantly, the pre-LECA origin of TFIID and SAGA. TFIID evolution exemplifies the dynamic plasticity in transcription complexes in the eukaryotic lineage.

Identifiants

pubmed: 31123066
pii: gad.300475.117
doi: 10.1101/gad.300475.117
pmc: PMC6672047
doi:

Substances chimiques

Transcription Factor TFIID 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

888-902

Informations de copyright

© 2019 Antonova et al.; Published by Cold Spring Harbor Laboratory Press.

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Auteurs

Simona V Antonova (SV)

Molecular Cancer Research and Regenerative Medicine, University Medical Centre Utrecht, 3584 CT Utrecht, The Netherlands.

Jeffrey Boeren (J)

Department of Developmental Biology, Erasmus MC, 3015 CN Rotterdam, The Netherlands.

H T Marc Timmers (HTM)

Molecular Cancer Research and Regenerative Medicine, University Medical Centre Utrecht, 3584 CT Utrecht, The Netherlands.
Department of Urology, Medical Centre-University of Freiburg, 79106 Freiburg, Germany.
Deutsches Konsortium für Translationale Krebsforschung (DKTK) Standort Freiburg, Deutsches Krebsforschungszentrum (DKFZ), 69120 Heidelberg, Germany.

Berend Snel (B)

Theoretical Biology and Bioinformatics, Department of Biology, Utrecht University, 3584 CH Utrecht, The Netherlands.

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Classifications MeSH