A Reference Genome Sequence for the European Silver Fir (


Journal

G3 (Bethesda, Md.)
ISSN: 2160-1836
Titre abrégé: G3 (Bethesda)
Pays: England
ID NLM: 101566598

Informations de publication

Date de publication:
09 07 2019
Historique:
pubmed: 21 6 2019
medline: 16 1 2020
entrez: 21 6 2019
Statut: epublish

Résumé

Silver fir (

Identifiants

pubmed: 31217262
pii: g3.119.400083
doi: 10.1534/g3.119.400083
pmc: PMC6643874
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

2039-2049

Informations de copyright

Copyright © 2019 Mosca et al.

Références

Glob Chang Biol. 2017 Dec;23(12):5108-5119
pubmed: 28556403
G3 (Bethesda). 2017 Sep 7;7(9):3157-3167
pubmed: 28751502
Bioinformatics. 2014 Jun 15;30(12):i302-9
pubmed: 24931998
BMC Plant Biol. 2014 Apr 16;14:95
pubmed: 24734980
Evolution. 2004 Aug;58(8):1705-29
pubmed: 15446425
Bioinformatics. 2018 Sep 15;34(18):3094-3100
pubmed: 29750242
Genetics. 2016 Dec;204(4):1613-1626
pubmed: 27794028
Genetics. 2014 Mar;196(3):891-909
pubmed: 24653211
Appl Plant Sci. 2013 Jan 02;1(1):
pubmed: 25202477
Nature. 2013 May 30;497(7451):579-84
pubmed: 23698360
Mol Cell. 2015 May 21;58(4):586-97
pubmed: 26000844
G3 (Bethesda). 2017 May 5;7(5):1563-1568
pubmed: 28341701
BMC Bioinformatics. 2014 Aug 15;15:281
pubmed: 25128196
Genome Res. 2012 Mar;22(3):549-56
pubmed: 22156294
Bioinformatics. 2013 Nov 1;29(21):2669-77
pubmed: 23990416
Bioinformatics. 2010 Mar 1;26(5):589-95
pubmed: 20080505
BMC Bioinformatics. 2019 Feb 5;20(Suppl 1):38
pubmed: 30717673
Nucleic Acids Res. 2018 Mar 16;46(5):2699
pubmed: 29425356
Heredity (Edinb). 2020 Jan;124(1):77-92
pubmed: 31182819
Genome Biol. 2014 Mar 04;15(3):R59
pubmed: 24647006
Genome Biol. 2004;5(2):R12
pubmed: 14759262
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Jul;27(4):2351-3
pubmed: 25812052
BMC Bioinformatics. 2005 Feb 15;6:31
pubmed: 15713233
Mol Biol Evol. 2000 May;17(5):773-81
pubmed: 10779538
PLoS One. 2016 Sep 15;11(9):e0163059
pubmed: 27632164
Agric For Meteorol. 2015 Dec 15;214-215:430-443
pubmed: 27713591
Gigascience. 2016 Nov 21;5(1):49
pubmed: 27871309
Mol Ecol. 2012 Nov;21(22):5530-45
pubmed: 23058000
PLoS One. 2013 Sep 04;8(9):e72439
pubmed: 24023741
Bioinformatics. 2015 Oct 1;31(19):3210-2
pubmed: 26059717
Genome Biol Evol. 2011;3:309-19
pubmed: 21402866
Genome Biol. 2012 Jun 25;13(6):R56
pubmed: 22731987
Bioinformatics. 2017 Feb 15;33(4):574-576
pubmed: 27797770
PLoS One. 2009;4(2):e4332
pubmed: 19194510
Nat Biotechnol. 2015 Mar;33(3):290-5
pubmed: 25690850
Genome Res. 2000 Apr;10(4):511-5
pubmed: 10779490
Bioinformatics. 2007 May 1;23(9):1061-7
pubmed: 17332020
Genetics. 2014 Mar;196(3):875-90
pubmed: 24653210
PLoS One. 2011 Mar 25;6(3):e18055
pubmed: 21464961
Bioinformatics. 2014 May 1;30(9):1228-35
pubmed: 24443382
Plant J. 2015 Jul;83(2):189-212
pubmed: 26017574
Bioinformatics. 2004 Nov 22;20(17):3252-5
pubmed: 15180927
Mol Ecol. 2016 Feb;25(3):776-94
pubmed: 26676992
BMC Bioinformatics. 2019 Feb 5;20(Suppl 1):37
pubmed: 30717661
BMC Bioinformatics. 2006 Feb 09;7:62
pubmed: 16469098
Bioinformatics. 2005 Sep 15;21(18):3674-6
pubmed: 16081474
New Phytol. 2014 Jan;201(1):180-92
pubmed: 24102203
Nat Plants. 2018 Feb;4(2):82-89
pubmed: 29379155
J Comput Biol. 2012 May;19(5):455-77
pubmed: 22506599
Bioinformatics. 2013 Jan 1;29(1):15-21
pubmed: 23104886
Genetika. 2007 Dec;43(12):1637-46
pubmed: 18592690
Mol Biol Evol. 2000 Sep;17(9):1302-12
pubmed: 10958847
Annu Rev Plant Biol. 2014;65:505-30
pubmed: 24579996
Nucleic Acids Res. 2014 Sep;42(15):e119
pubmed: 24990371
Ann Bot. 2011 Mar;107(3):467-590
pubmed: 21257716
Nat Plants. 2018 Jun;4(6):312-313
pubmed: 29872174
Bioinformatics. 2011 Mar 15;27(6):764-70
pubmed: 21217122
Genome Biol. 2008 Jan 11;9(1):R7
pubmed: 18190707
Methods Mol Biol. 2016;1418:283-334
pubmed: 27008021
Annu Rev Genet. 1999;33:479-532
pubmed: 10690416
J Mol Evol. 1999 Sep;49(3):376-84
pubmed: 10473779
Bioinformatics. 2004 Nov 1;20(16):2878-9
pubmed: 15145805
Ann Bot. 2005 Jan;95(1):207-17
pubmed: 15596468
J Mol Biol. 1990 Oct 5;215(3):403-10
pubmed: 2231712

Auteurs

Elena Mosca (E)

C3A - Centro Agricoltura Alimenti Ambiente, University of Trento, via E. Mach 1, 38010 S. Michele a/Adige (TN), Italy.

Fernando Cruz (F)

CNAG-CRG, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, BaldiriReixac 4, 08028 Barcelona, Spain.

Jèssica Gómez-Garrido (J)

CNAG-CRG, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, BaldiriReixac 4, 08028 Barcelona, Spain.

Luca Bianco (L)

Fondazione Edmund Mach, Via Mach 1, 38010 S. Michele a/Adige (TN), Italy.

Christian Rellstab (C)

Swiss Federal Research Institute WSL, Zürcherstrasse 111, 8903 Birmensdorf, Switzerland.

Sabine Brodbeck (S)

Swiss Federal Research Institute WSL, Zürcherstrasse 111, 8903 Birmensdorf, Switzerland.

Katalin Csilléry (K)

Swiss Federal Research Institute WSL, Zürcherstrasse 111, 8903 Birmensdorf, Switzerland.
University of Zürich, Department of Evolutionary Biology and Environmental Studies, Winterthurerstrasse 190, CH-8057 Zurich.

Bruno Fady (B)

Institut National de la Recherche Agronomique (INRA), Unité de Recherche Ecologie des Forêts Méditerranéennes (URFM), Site Agroparc, Domaine Saint Paul, 84914 Avignon, France.

Matthias Fladung (M)

Thünen-Institute of Forest Genetics, Sieker Landstr, 2, 22927 Grosshansdorf, Germany.

Barbara Fussi (B)

Bavarian Office for Forest Seeding and Planting (ASP), Applied Forest Genetics, Forstamtsplatz 1, 83317 Teisendorf, Germany.

Dušan Gömöry (D)

Technical University in Zvolen, TG Masaryka 24, 96053 Zvolen, Slovakia.

Santiago C González-Martínez (SC)

Institut National de la Recherche Agronomique (INRA), UMR1202 Biodiversity, Genes & Communities (BIOGECO), University of Bordeaux, 69, route d'Arcachon, 33610 Cestas, France.

Delphine Grivet (D)

INIA Forest Research Centre, Carretera de la Coruña km 7.5, 28040 Madrid, Spain.

Marta Gut (M)

CNAG-CRG, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, BaldiriReixac 4, 08028 Barcelona, Spain.
Universitat Pompeu Fabra (UPF), Plaça de la Mercè, 10, 08002 Barcelona, Spain.

Ole Kim Hansen (OK)

Department of Geosciences and Natural Resource Management (IGN), University of Copenhagen, Rolighedsvej 23, 1958 Frederiksberg C, Denmark.

Katrin Heer (K)

Philipps-Universität Marburg, Faculty of Biology (PUM), Karl-von-Frisch-Str. 8, 35032 Marburg, Germany.

Zeki Kaya (Z)

Department of Biological Sciences (METU), Middle East Technical University, 06800 Çankaya/Ankara, Turkey.

Konstantin V Krutovsky (KV)

Department of Forest Genetics and Forest Tree Breeding, Georg-August University of Göttingen, Büsgenweg 2, 37077 Göttingen, Germany.
Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Gubkina Str. 3, 11991 Moscow, Russia.
Laboratory of Forest Genomics, Genome Research and Education Center, Institute of Fundamental Biology and Biotechnology, Siberian Federal University, 50a/2 Akademgorodok, 660036 Krasnoyarsk, Russia.

Birgit Kersten (B)

Thünen-Institute of Forest Genetics, Sieker Landstr, 2, 22927 Grosshansdorf, Germany.

Sascha Liepelt (S)

Philipps-Universität Marburg, Faculty of Biology (PUM), Karl-von-Frisch-Str. 8, 35032 Marburg, Germany.

Lars Opgenoorth (L)

Philipps-Universität Marburg, Faculty of Biology (PUM), Karl-von-Frisch-Str. 8, 35032 Marburg, Germany.

Christoph Sperisen (C)

Swiss Federal Research Institute WSL, Zürcherstrasse 111, 8903 Birmensdorf, Switzerland.

Kristian K Ullrich (KK)

Department of Biological Sciences (METU), Middle East Technical University, 06800 Çankaya/Ankara, Turkey.

Giovanni G Vendramin (GG)

Institute of Biosciences and BioResources, National Research Council, Via Madonna del Piano 10,50019 Sesto Fiorentino (Firenze), Italy.

Marjana Westergren (M)

Slovenian Forestry Institute (SFI), Gozdarskiinštitut Slovenije), Večna pot 2, 1000 Ljubljana, Slovenia.

Birgit Ziegenhagen (B)

Philipps-Universität Marburg, Faculty of Biology (PUM), Karl-von-Frisch-Str. 8, 35032 Marburg, Germany.

Tyler Alioto (T)

CNAG-CRG, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, BaldiriReixac 4, 08028 Barcelona, Spain.
Universitat Pompeu Fabra (UPF), Plaça de la Mercè, 10, 08002 Barcelona, Spain.

Felix Gugerli (F)

Swiss Federal Research Institute WSL, Zürcherstrasse 111, 8903 Birmensdorf, Switzerland.

Berthold Heinze (B)

Federal Research and Training Centre for Forests, Natural Hazards and Landscape (BFW), Seckendorff-Gudent Weg 8, 1130 Wien, Austria.

Maria Höhn (M)

Max Planck Institute for Evolutionary Biology, Department for Evolutionary Genetics (MPI), August Thienemann Str. 2, 24306 Ploen, Germany.

Michela Troggio (M)

Fondazione Edmund Mach, Via Mach 1, 38010 S. Michele a/Adige (TN), Italy.

David B Neale (DB)

Department of Plant Sciences, University of California at Davis (UCD), Davis 95616 dbneale@ucdavis.edu.

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Classifications MeSH