Genome-based reclassification of Bacillus plakortidis Borchert et al. 2007 and Bacillus lehensis Ghosh et al. 2007 as a later heterotypic synonym of Bacillus oshimensis Yumoto et al. 2005; Bacillus rhizosphaerae Madhaiyan et al. 2011 as a later heterotypic synonym of Bacillus clausii Nielsen et al. 1995.
Alkaliphilic Bacillus
Bacillus clausii
Bacillus lehensis
Bacillus oshimensis
Bacillus plakortidis
Bacillus rhizosphaerae
Heterotypic synonym
Phylogenomics
Journal
Antonie van Leeuwenhoek
ISSN: 1572-9699
Titre abrégé: Antonie Van Leeuwenhoek
Pays: Netherlands
ID NLM: 0372625
Informations de publication
Date de publication:
Dec 2019
Dec 2019
Historique:
received:
09
04
2019
accepted:
01
07
2019
pubmed:
18
7
2019
medline:
18
3
2020
entrez:
18
7
2019
Statut:
ppublish
Résumé
In the present study, phylogenetic and genome-based comparison was carried out to clarify the taxonomic positions of alkaliphilic Bacillus species, Bacillus plakortidis, Bacillus lehensis, Bacillus oshimensis, Bacillus rhizosphaerae and Bacillus clausii. Phylogenetic trees based on 16S rRNA gene sequences and concatenated protein marker genes were constructed. Average nucleotide identity (ANI) values were calculated to compare genetic relatedness. In phylogenetic trees, B. plakortidis DSM 19153
Identifiants
pubmed: 31312953
doi: 10.1007/s10482-019-01299-z
pii: 10.1007/s10482-019-01299-z
doi:
Substances chimiques
Bacterial Proteins
0
DNA, Bacterial
0
DNA, Ribosomal
0
RNA, Ribosomal, 16S
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
1725-1730Subventions
Organisme : External cooperative project of Fujian Academy of Agricultural Sciences
ID : DEC201821209
Organisme : The Science and Technology Innovation Team Program of Fujian Academy of Agricultural Sciences
ID : STIT2017-1-11
Organisme : The Scientific Research Foundation for Returned Scholars, Fujian Academy of Agricultural Sciences
ID : YJRC2014-1