Design of an Automated Reagent-Dispensing System for Reaction Screening and Validation with DNA-Tagged Substrates.


Journal

ACS combinatorial science
ISSN: 2156-8944
Titre abrégé: ACS Comb Sci
Pays: United States
ID NLM: 101540531

Informations de publication

Date de publication:
09 03 2020
Historique:
pubmed: 14 2 2020
medline: 2 2 2021
entrez: 14 2 2020
Statut: ppublish

Résumé

Laboratory automation strategies have vast potential for accelerating discovery processes. They enable higher efficiency and throughput for time-consuming screening procedures and reduce error-prone manual steps. Automating repetitive procedures can for instance support chemists in optimizing chemical reactions. Particularly, the technology of DNA-encoded libraries (DELs) may benefit from automation techniques, since translation of chemical reactions to DNA-tagged reactants often requires screening of multiple reaction parameters and evaluation of large numbers of reactants. Here, we describe a portable, automated system for reagent dispensing that was designed from open source materials. The system was validated by performing amide coupling of carboxylic acids to DNA-linked amine and a micelle-mediated Povarov reaction to DNA-tagged hexahydropyrroloquinolines. The latter reaction required accurate pipetting of multiple components including different solvents and a surface-active reagent. Analysis of reactions demonstrated that the robotic system achieved high accuracy comparable to experimentation by an experienced chemist with the potential of higher throughput.

Identifiants

pubmed: 32053337
doi: 10.1021/acscombsci.9b00207
doi:

Substances chimiques

Amides 0
Amines 0
Carboxylic Acids 0
Pyrroles 0
Quinolines 0
pyrroloquinoline 0
DNA 9007-49-2

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

101-108

Auteurs

Jens Bobers (J)

TU Dortmund University, Department of Chemical and Biochemical Engineering, Laboratory of Equipment Design, Emil-Figge-Strasse 68, 44227 Dortmund, Germany.

Mateja Klika Škopić (MK)

TU Dortmund University, Faculty of Chemistry and Chemical Biology, Medicinal Chemistry, Otto-Hahn-Strasse 6, 44227 Dortmund, Germany.

Robin Dinter (R)

TU Dortmund University, Department of Chemical and Biochemical Engineering, Laboratory of Equipment Design, Emil-Figge-Strasse 68, 44227 Dortmund, Germany.

Piriyanth Sakthithasan (P)

TU Dortmund University, Department of Chemical and Biochemical Engineering, Laboratory of Equipment Design, Emil-Figge-Strasse 68, 44227 Dortmund, Germany.

Laura Neukirch (L)

TU Dortmund University, Faculty of Chemistry and Chemical Biology, Medicinal Chemistry, Otto-Hahn-Strasse 6, 44227 Dortmund, Germany.

Christian Gramse (C)

Faculty of Chemistry and Chemical Biology, Polymer Hybrid Systems, Otto-Hahn-Strasse 6, 44227 Dortmund, Germany.

Ralf Weberskirch (R)

Faculty of Chemistry and Chemical Biology, Polymer Hybrid Systems, Otto-Hahn-Strasse 6, 44227 Dortmund, Germany.

Andreas Brunschweiger (A)

TU Dortmund University, Faculty of Chemistry and Chemical Biology, Medicinal Chemistry, Otto-Hahn-Strasse 6, 44227 Dortmund, Germany.

Norbert Kockmann (N)

TU Dortmund University, Department of Chemical and Biochemical Engineering, Laboratory of Equipment Design, Emil-Figge-Strasse 68, 44227 Dortmund, Germany.

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Classifications MeSH