MAS NMR detection of hydrogen bonds for protein secondary structure characterization.
Cross polarization
Fast MAS
Hydrogen bonds
Proton detection
Secondary structure
Journal
Journal of biomolecular NMR
ISSN: 1573-5001
Titre abrégé: J Biomol NMR
Pays: Netherlands
ID NLM: 9110829
Informations de publication
Date de publication:
May 2020
May 2020
Historique:
received:
13
12
2019
accepted:
09
03
2020
pubmed:
19
3
2020
medline:
7
2
2021
entrez:
19
3
2020
Statut:
ppublish
Résumé
Hydrogen bonds are essential for protein structure and function, making experimental access to long-range interactions between amide protons and heteroatoms invaluable. Here we show that measuring distance restraints involving backbone hydrogen atoms and carbonyl- or α-carbons enables the identification of secondary structure elements based on hydrogen bonds, provides long-range contacts and validates spectral assignments. To this end, we apply specifically tailored, proton-detected 3D (H)NCOH and (H)NCAH experiments under fast magic angle spinning (MAS) conditions to microcrystalline samples of SH3 and GB1. We observe through-space, semi-quantitative correlations between protein backbone carbon atoms and multiple amide protons, enabling us to determine hydrogen bonding patterns and thus to identify β-sheet topologies and α-helices in proteins. Our approach shows the value of fast MAS and suggests new routes in probing both secondary structure and the role of functionally-relevant protons in all targets of solid-state MAS NMR.
Identifiants
pubmed: 32185644
doi: 10.1007/s10858-020-00307-z
pii: 10.1007/s10858-020-00307-z
pmc: PMC7211791
doi:
Substances chimiques
Amyloid
0
Protons
0
Pancreatic Elastase
EC 3.4.21.36
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
247-256Subventions
Organisme : Deutsche Forschungsgemeinschaft
ID : SFB 1078 B1
Organisme : Deutsche Forschungsgemeinschaft
ID : FR 4220/1-1
Organisme : Human Frontier Science Program
ID : LT000022/2019-L
Organisme : European Molecular Biology Organization
ID : ALTF 35-2019
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