Centenarian Exomes as a Tool for Evaluating the Clinical Relevance of Germline Tumor Suppressor Mutations.


Journal

Technology in cancer research & treatment
ISSN: 1533-0338
Titre abrégé: Technol Cancer Res Treat
Pays: United States
ID NLM: 101140941

Informations de publication

Date de publication:
Historique:
entrez: 3 4 2020
pubmed: 3 4 2020
medline: 21 11 2020
Statut: ppublish

Résumé

The aim of the present study was to evaluate the clinical relevance of mutations in tumor suppressor genes using whole-exome sequencing data from centenarians and young healthy individuals. Two pools, one of centenarians and one of young individuals, were constructed and whole-exome sequencing was performed. We examined the whole-exome sequencing data of Bulgarian individuals for carriership of tumor suppressor gene variants. Of all variants annotated in both pools, 5080 (0.06%) are variants in tumor suppressor genes but only 46 show significant difference in allele frequencies between the two studied groups. Four variants (0.004%) are pathogenic/risk factors according to single nucleotide polymorphism database: rs1566734 in Based on their high minor allele frequencies and presence in the centenarian group, we could reclassify them from pathogenic/risk factors to benign. Our study shows that centenarian exomes can be used for re-evaluating the clinically uncertain variants.

Identifiants

pubmed: 32233832
doi: 10.1177/1533033820911082
pmc: PMC7132786
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1533033820911082

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Auteurs

Lubomir Balabanski (L)

Department of Medical Genetics, Medical University-Sofia, Sofia, Bulgaria.
Hospital"Malinov," Sofia, Bulgaria.

Dimitar Serbezov (D)

Department of Medical Genetics, Medical University-Sofia, Sofia, Bulgaria.

Dragomira Nikolova (D)

Department of Medical Genetics, Medical University-Sofia, Sofia, Bulgaria.

Olga Antonova (O)

Department of Medical Genetics, Medical University-Sofia, Sofia, Bulgaria.

Desislava Nesheva (D)

Department of Medical Genetics, Medical University-Sofia, Sofia, Bulgaria.

Zora Hammoudeh (Z)

Department of Medical Genetics, Medical University-Sofia, Sofia, Bulgaria.

Radoslava Vazharova (R)

Hospital"Malinov," Sofia, Bulgaria.
Medical Faculty, Sofia University "St Kliment Ohridski," Sofia, Bulgaria.

Sena Karachanak-Yankova (S)

Department of Medical Genetics, Medical University-Sofia, Sofia, Bulgaria.

Rada Staneva (R)

Department of Medical Genetics, Medical University-Sofia, Sofia, Bulgaria.

Marta Mihaylova (M)

Department of Medical Genetics, Medical University-Sofia, Sofia, Bulgaria.
Bulgarian Academy of Science-BAS, Sofia, Bulgaria.

Vera Damyanova (V)

Department of Medical Genetics, Medical University-Sofia, Sofia, Bulgaria.

Savina Hadjidekova (S)

Department of Medical Genetics, Medical University-Sofia, Sofia, Bulgaria.

Draga Toncheva (D)

Department of Medical Genetics, Medical University-Sofia, Sofia, Bulgaria.
Bulgarian Academy of Science-BAS, Sofia, Bulgaria.

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Classifications MeSH