Identifying lipids tightly bound to an integral membrane protein.


Journal

Biochimica et biophysica acta. Biomembranes
ISSN: 1879-2642
Titre abrégé: Biochim Biophys Acta Biomembr
Pays: Netherlands
ID NLM: 101731713

Informations de publication

Date de publication:
01 10 2020
Historique:
received: 16 02 2020
revised: 11 04 2020
accepted: 05 05 2020
pubmed: 15 5 2020
medline: 7 1 2021
entrez: 15 5 2020
Statut: ppublish

Résumé

Anabaena Sensory Rhodopsin (ASR) is a microbial photosensor from the cyanobacterium Anabaena sp. PCC 7120. It was found in previous studies that ASR co-purifies with several small molecules, although their identities and structural or functional roles remained unclear. Here, we use solid-state nuclear magnetic resonance (SSNMR) spectroscopy and mass spectrometry to characterize these molecules. Numerous correlations atypical for protein amino acids were found and assigned in the SSNMR spectra. The chemical shift patterns correspond to N-acetyl-d-glucosamine, N-acetyl-d-mannosaminuronic acid, and 4-acetamido-4,6-dideoxy-d-galactose which are part of the Enterobacterial Common Antigen (ECA). These sugars undergo rapid anisotropic motions and are likely linked flexibly to a rigid anchor that tightly binds ASR. Phosphorus NMR reveals several signals that are characteristic of monophosphates, further suggesting phosphatidylglyceride as the ECA lipid carrier which is anchored to ASR. In addition, NMR signals corresponding to common phospholipid phosphatidylethanolamine (PE) have been detected. The presence of PE tightly interacting with ASR was confirmed using liquid chromatography-mass spectrometry. This article commemorates Professor Michèle Auger and her contributions to membrane biophysics and Nuclear Magnetic Resonance.

Identifiants

pubmed: 32407777
pii: S0005-2736(20)30185-1
doi: 10.1016/j.bbamem.2020.183345
pii:
doi:

Substances chimiques

Antigens, Bacterial 0
Membrane Proteins 0
Phosphatidylethanolamines 0
Sensory Rhodopsins 0
enterobacterial common antigen 0
phosphatidylethanolamine 39382-08-6

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

183345

Informations de copyright

Copyright © 2020 Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Jeffrey E de Vlugt (JE)

Department of Physics, University of Guelph, Guelph, ON N1G 2W1, Canada.

Peng Xiao (P)

Department of Physics, University of Guelph, Guelph, ON N1G 2W1, Canada; Biophysics Interdepartmental Group, University of Guelph, Guelph, ON N1G 2W1, Canada.

Rachel Munro (R)

Department of Physics, University of Guelph, Guelph, ON N1G 2W1, Canada; Biophysics Interdepartmental Group, University of Guelph, Guelph, ON N1G 2W1, Canada.

Armen Charchoglyan (A)

Advanced Analysis Centre, University of Guelph, Guelph, ON N1G 2W1, Canada.

Dyanne Brewer (D)

Advanced Analysis Centre, University of Guelph, Guelph, ON N1G 2W1, Canada.

M Sameer Al-Abdul-Wahid (MS)

Advanced Analysis Centre, University of Guelph, Guelph, ON N1G 2W1, Canada.

Leonid S Brown (LS)

Department of Physics, University of Guelph, Guelph, ON N1G 2W1, Canada; Biophysics Interdepartmental Group, University of Guelph, Guelph, ON N1G 2W1, Canada.

Vladimir Ladizhansky (V)

Department of Physics, University of Guelph, Guelph, ON N1G 2W1, Canada; Biophysics Interdepartmental Group, University of Guelph, Guelph, ON N1G 2W1, Canada. Electronic address: vladizha@uoguelph.ca.

Articles similaires

Conservation of the cooling agent binding pocket within the TRPM subfamily.

Kate Huffer, Matthew C S Denley, Elisabeth V Oskoui et al.
1.00
TRPM Cation Channels Animals Binding Sites Mice Pyrimidinones
Fucosyltransferases Drug Repositioning Molecular Docking Simulation Molecular Dynamics Simulation Humans
Receptor, Cannabinoid, CB1 Ligands Molecular Dynamics Simulation Protein Binding Thermodynamics
Humans Stomach Neoplasms Macrophages Tumor Microenvironment Disease Progression

Classifications MeSH