A Novel Cold-adapted Methylovulum species, with a High C16:1ω5c Content, Isolated from an Arctic Thermal Spring in Spitsbergen.
Adaptation, Physiological
Arctic Regions
Bacterial Proteins
/ genetics
Cold Temperature
DNA, Bacterial
/ genetics
Fatty Acids
/ analysis
Hot Springs
/ microbiology
Methane
/ metabolism
Methanol
/ metabolism
Methylococcaceae
/ chemistry
Phylogeny
RNA, Ribosomal, 16S
/ genetics
Sequence Analysis, DNA
Svalbard
arctic spring
cold adapted
fatty acids
methanotrophs
pMMO
Journal
Microbes and environments
ISSN: 1347-4405
Titre abrégé: Microbes Environ
Pays: Japan
ID NLM: 9710937
Informations de publication
Date de publication:
2020
2020
Historique:
entrez:
16
6
2020
pubmed:
17
6
2020
medline:
26
3
2021
Statut:
ppublish
Résumé
A novel cold-adapted methane-oxidizing bacterium, termed TFB, was isolated from the thermoglacial Arctic karst spring, Trollosen, located in the South Spitsbergen National Park (Norway). The source water is cold and extremely low in phosphate and nitrate. The isolate belongs to the Methylovulum genus of gammaproteobacterial methanotrophs, with the closest phylogenetic affiliation with Methylovulum miyakonense and Methylovulum psychrotolerans (96.2 and 96.1% 16S rRNA gene sequence similarities, respectively). TFB is a strict aerobe that only grows in the presence of methane or methanol. It fixes atmospheric nitrogen and contains Type I intracellular membranes. The growth temperature range was 2-22°C, with an optimum at 13-18°C. The functional genes pmoA, mxaF, and nifH were identified by PCR, whereas mmoX and cbbL were not. C16:1ω5c was identified as the major fatty acid constituent, at an amount (>49%) not previously found in any methanotrophs, and is likely to play a major role in cold adaptation. Strain TFB may be regarded as a new psychrotolerant or psychrophilic species within the genus Methylovulum. The recovery of this cold-adapted bacterium from a neutral Arctic thermal spring increases our knowledge of the diversity and adaptation of extremophilic gammaproteobacterial methanotrophs in the candidate family "Methylomonadaceae".
Identifiants
pubmed: 32536671
doi: 10.1264/jsme2.ME20044
pmc: PMC7511782
doi:
Substances chimiques
Bacterial Proteins
0
DNA, Bacterial
0
Fatty Acids
0
RNA, Ribosomal, 16S
0
Methane
OP0UW79H66
Methanol
Y4S76JWI15
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Références
Front Microbiol. 2018 Dec 19;9:3162
pubmed: 30631317
Int J Syst Evol Microbiol. 2008 Aug;58(Pt 8):1807-14
pubmed: 18676461
Environ Microbiol. 2014 Jun;16(6):1867-78
pubmed: 24650084
Int J Syst Evol Microbiol. 2013 Jun;63(Pt 6):2282-2289
pubmed: 23159751
Front Microbiol. 2015 Dec 15;6:1346
pubmed: 26696968
Nature. 2007 Dec 6;450(7171):879-82
pubmed: 18004300
FEMS Microbiol Lett. 2010 Nov;312(1):71-6
pubmed: 20846142
Microorganisms. 2015 Aug 21;3(3):484-99
pubmed: 27682101
Proc Natl Acad Sci U S A. 2008 Jan 8;105(1):300-4
pubmed: 18172218
Environ Microbiol Rep. 2009 Oct;1(5):293-306
pubmed: 23765882
Int J Syst Evol Microbiol. 2015 Jan;65(Pt 1):251-259
pubmed: 25342114
Appl Environ Microbiol. 2011 Aug 15;77(16):5643-54
pubmed: 21724892
Microbiol Rev. 1996 Dec;60(4):609-40
pubmed: 8987358
Nat Biotechnol. 2018 Nov;36(10):996-1004
pubmed: 30148503
Front Microbiol. 2019 Apr 05;10:589
pubmed: 31024466
Microbiology (Reading). 1997 Apr;143 ( Pt 4):1451-9
pubmed: 9141708
Microorganisms. 2020 Feb 13;8(2):
pubmed: 32069978
Proc Natl Acad Sci U S A. 2006 Feb 14;103(7):2363-7
pubmed: 16452171
FEMS Microbiol Ecol. 2005 Jun 1;53(1):15-26
pubmed: 16329925
Front Microbiol. 2016 Jun 15;7:851
pubmed: 27379029
Int J Syst Evol Microbiol. 2016 Jun;66(6):2417-2423
pubmed: 27031985
Microbiol Rev. 1989 Mar;53(1):68-84
pubmed: 2496288
Appl Environ Microbiol. 2014 Nov;80(21):6782-91
pubmed: 25172849
Appl Environ Microbiol. 2007 Jun;73(11):3556-65
pubmed: 17416684
mSphere. 2019 Jun 5;4(3):
pubmed: 31167950
Microbiol Rev. 1996 Jun;60(2):439-71
pubmed: 8801441
FEMS Microbiol Ecol. 2019 Sep 1;95(9):
pubmed: 31374570
Microbiol Mol Biol Rev. 2004 Dec;68(4):686-91
pubmed: 15590780
Int J Syst Evol Microbiol. 2007 May;57(Pt 5):1073-1080
pubmed: 17473262
Int J Syst Evol Microbiol. 2017 Nov;67(11):4507-4514
pubmed: 28984554
Adv Appl Microbiol. 2008;63:183-229
pubmed: 18395128
Int J Syst Evol Microbiol. 2013 Mar;63(Pt 3):1073-1082
pubmed: 22707534
Astrobiology. 2011 Sep;11(7):665-78
pubmed: 21899440
Int J Syst Evol Microbiol. 2015 Oct;65(10):3527-3534
pubmed: 26297568
Syst Appl Microbiol. 1999 Dec;22(4):565-72
pubmed: 10794145
Int J Syst Evol Microbiol. 2011 Oct;61(Pt 10):2456-2463
pubmed: 21097638
Arch Microbiol. 2002 Apr;177(4):279-89
pubmed: 11889481
Chemosphere. 2002 Dec;49(8):777-89
pubmed: 12430657
Mol Biol Evol. 2016 Jul;33(7):1870-4
pubmed: 27004904
Int J Syst Evol Microbiol. 2006 Jan;56(Pt 1):109-13
pubmed: 16403874
Chem Rev. 2007 Feb;107(2):486-513
pubmed: 17261072
Environ Microbiol. 2013 Sep;15(9):2395-417
pubmed: 23718889
Nucleic Acids Res. 1980 Oct 10;8(19):4321-5
pubmed: 7433111
Int J Syst Evol Microbiol. 2004 Jan;54(Pt 1):151-156
pubmed: 14742473
Int J Syst Evol Microbiol. 2014 Mar;64(Pt 3):989-999
pubmed: 24425820
J Gen Microbiol. 1970 May;61(2):205-18
pubmed: 5476891
Syst Appl Microbiol. 2014 May;37(3):165-9
pubmed: 24685906