Genome-wide identification and expression analysis of jasmonate ZIM domain gene family in tuber mustard (Brassica juncea var. tumida).
Arabidopsis
/ genetics
Cyclopentanes
/ metabolism
Gene Expression Regulation, Plant
Genome, Plant
Multigene Family
Mustard Plant
/ genetics
Oxylipins
/ metabolism
Phylogeny
Plant Leaves
/ metabolism
Plant Proteins
/ classification
Plant Roots
/ metabolism
Protein Domains
RNA, Plant
/ metabolism
Repressor Proteins
/ classification
Stress, Physiological
Journal
PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081
Informations de publication
Date de publication:
2020
2020
Historique:
received:
17
12
2019
accepted:
01
06
2020
entrez:
17
6
2020
pubmed:
17
6
2020
medline:
1
9
2020
Statut:
epublish
Résumé
Tuber mustard, which is the raw material of Fuling pickle, is a crop with great economic value. However, during growth and development, tuber mustard is frequently attacked by the pathogen Plasmodiophora brassicae and frequently experiences salinity stress. Jasmonic acid (JA) is a hormone related to plant resistance to biotic and abiotic stress. Jasmonate ZIM domain proteins (JAZs) are crucial components of the JA signaling pathway and play important roles in plant responses to biotic and abiotic stress. To date, no information is available about the characteristics of the JAZ family genes in tuber mustard. Here, 38 BjJAZ genes were identified in the whole genome of tuber mustard. The BjJAZ genes are located on 17 of 18 chromosomes in the tuber mustard genome. The gene structures and protein motifs of the BjJAZ genes are conserved between tuber mustard and Arabidopsis. The results of qRT-PCR analysis showed that BjuA030800 was specifically expressed in root, and BjuA007483 was specifically expressed in leaf. In addition, 13 BjJAZ genes were transiently induced by P. brassicae at 12 h, and 7 BjJAZ genes were induced by salt stress from 12 to 24 h. These results provide valuable information for further studies on the role of BjJAZ genes in the regulation of plant growth and development and in the response to biotic and abiotic stress.
Identifiants
pubmed: 32544205
doi: 10.1371/journal.pone.0234738
pii: PONE-D-19-33314
pmc: PMC7297370
doi:
Substances chimiques
Cyclopentanes
0
Oxylipins
0
Plant Proteins
0
RNA, Plant
0
Repressor Proteins
0
jasmonic acid
6RI5N05OWW
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
e0234738Déclaration de conflit d'intérêts
The authors have declared that no competing interests exist.
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