DOF, MYB and TCP transcription factors: Their possible roles on barley germination and seedling establishment.


Journal

Gene expression patterns : GEP
ISSN: 1872-7298
Titre abrégé: Gene Expr Patterns
Pays: Netherlands
ID NLM: 101167473

Informations de publication

Date de publication:
09 2020
Historique:
received: 02 04 2020
accepted: 03 05 2020
pubmed: 1 7 2020
medline: 20 7 2021
entrez: 1 7 2020
Statut: ppublish

Résumé

Seed germination is a multi-staged complex process during seed plant life cycle, and it is tightly regulated through a coordinated expression of diverse genes in diverse tissues. As regulatory molecules of gene expression, determination of transcription factors is crucial to understanding molecular basis and regulatory network of germination process and seedling establishment. However, limited data on the contributions of these transcription factors to the germination of crop barley (Hordeum vulgare L.) are available. Here, we investigated the expression profiles of selected transcription factors from different families (DOF, MYB and TCP) with qRT-PCR analysis in various tissues including coleoptiles, leaves and roots following the germination. Analysis of MYB and DOF gene expression profiles indicated that there were differing expressions in different aged tissues, HvMYB5 and HvDOF2 being the most outstanding one in the oldest tissue, 15-day-old root. On the other hand, investigated TCP genes were lowly expressed compared to selected MYB and DOF genes, except HvTCP3, where the highest expression was observed in 15-day-old root tissue. The obtained expression profiles illustrate the importance of potential regulatory roles of transcription factors in early developmental stages of barley germination and seedling establishment.

Identifiants

pubmed: 32603687
pii: S1567-133X(20)30049-1
doi: 10.1016/j.gep.2020.119116
pii:
doi:

Substances chimiques

Plant Proteins 0
Transcription Factors 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

119116

Informations de copyright

Copyright © 2020 Elsevier B.V. All rights reserved.

Auteurs

Merve Seven (M)

Yeditepe University, Department of Genetics and Bioengineering, 34755, Istanbul, Turkey.

Hulya Akdemir (H)

Gebze Technical University, Faculty of Science, Department of Molecular Biology and Genetics, 41400, Kocaeli, Turkey. Electronic address: hakdemir@gtu.edu.tr.

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Classifications MeSH