Patterns of genetic connectedness between modern and medieval Estonian genomes reveal the origins of a major ancestry component of the Finnish population.
Estonian Biobank
Finnish bottleneck
ancient DNA
community structure
identity by descent
imputation
long shared allele intervals
medieval Estonian genomes
population structure
Journal
American journal of human genetics
ISSN: 1537-6605
Titre abrégé: Am J Hum Genet
Pays: United States
ID NLM: 0370475
Informations de publication
Date de publication:
02 09 2021
02 09 2021
Historique:
received:
29
03
2021
accepted:
23
07
2021
pubmed:
20
8
2021
medline:
16
9
2021
entrez:
19
8
2021
Statut:
ppublish
Résumé
The Finnish population is a unique example of a genetic isolate affected by a recent founder event. Previous studies have suggested that the ancestors of Finnic-speaking Finns and Estonians reached the circum-Baltic region by the 1
Identifiants
pubmed: 34411538
pii: S0002-9297(21)00280-9
doi: 10.1016/j.ajhg.2021.07.012
pmc: PMC8456179
pii:
doi:
Substances chimiques
DNA, Ancient
0
Types de publication
Historical Article
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
1792-1806Subventions
Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : Wellcome Trust
ID : 200368/Z/15/Z
Pays : United Kingdom
Organisme : NIGMS NIH HHS
ID : R35 GM133805
Pays : United States
Organisme : Wellcome Trust
ID : 2000368/Z/15/Z
Pays : United Kingdom
Informations de copyright
Copyright © 2021 American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.
Déclaration de conflit d'intérêts
Declaration of interests A.L.W. is a paid consultant for 23andMe and the owner of HAPI-DNA LLC. All other authors declare no competing interests.
Références
Bioinformatics. 2009 Jul 15;25(14):1754-60
pubmed: 19451168
PLoS Genet. 2013 Nov;9(11):e1003912
pubmed: 24244186
Nat Commun. 2014 Oct 21;5:5257
pubmed: 25334030
G3 (Bethesda). 2017 Oct 5;7(10):3459-3468
pubmed: 28983069
Curr Opin Genet Dev. 2018 Dec;53:21-27
pubmed: 29960127
Nature. 2015 Oct 1;526(7571):68-74
pubmed: 26432245
Genome Res. 2015 Apr;25(4):459-66
pubmed: 25770088
Am J Hum Genet. 2019 Jul 3;105(1):78-88
pubmed: 31178127
Science. 2005 Dec 16;310(5755):1782-6
pubmed: 16357253
Genome Biol. 2019 Jul 25;20(1):143
pubmed: 31345249
Nat Commun. 2018 Jan 30;9(1):442
pubmed: 29382937
Genetics. 2017 Mar;205(3):1335-1351
pubmed: 28108588
Hum Genet. 2003 May;112(5-6):441-56
pubmed: 12627295
Am J Hum Genet. 2020 Apr 2;106(4):426-437
pubmed: 32169169
Am J Hum Genet. 2015 Sep 3;97(3):404-18
pubmed: 26299365
Hum Mol Genet. 1999;8(10):1913-23
pubmed: 10469845
Nature. 2020 Jun;582(7812):384-388
pubmed: 32555485
Nat Commun. 2020 Nov 30;11(1):6130
pubmed: 33257650
Am J Hum Genet. 2018 May 3;102(5):760-775
pubmed: 29706349
Sci Rep. 2020 Apr 22;10(1):6843
pubmed: 32321996
Nat Genet. 2016 Aug;48(8):965-969
pubmed: 27376236
Am J Hum Genet. 2018 Sep 6;103(3):338-348
pubmed: 30100085
Genome Res. 2010 Sep;20(9):1297-303
pubmed: 20644199
Mol Biol Evol. 2021 May 4;38(5):2131-2151
pubmed: 33355662
Science. 2012 Apr 27;336(6080):466-9
pubmed: 22539720
Forensic Sci Int Genet. 2018 Jul;35:123-135
pubmed: 29753263
Gigascience. 2015 Feb 25;4:7
pubmed: 25722852
Sci Adv. 2021 Jan 20;7(4):
pubmed: 33523926
Cold Spring Harb Protoc. 2010 Jun;2010(6):pdb.prot5448
pubmed: 20516186
Curr Biol. 2013 Apr 8;23(7):553-559
pubmed: 23523248
J Evol Biol. 2013 Jun;26(6):1244-53
pubmed: 23675756
Nat Genet. 2016 Jun;48(6):593-9
pubmed: 27111036
Curr Biol. 2017 Jul 24;27(14):2185-2193.e6
pubmed: 28712569
Eur J Hum Genet. 2020 Nov;28(11):1580-1591
pubmed: 32712624
Nat Commun. 2021 Jun 10;12(1):3546
pubmed: 34112768
Nature. 2007 Oct 18;449(7164):913-8
pubmed: 17943131
PLoS Biol. 2013;11(5):e1001555
pubmed: 23667324
Nat Commun. 2018 Nov 27;9(1):5018
pubmed: 30479341
Hereditas. 1972;71(2):195-236
pubmed: 4680662
Genome Res. 2009 Feb;19(2):318-26
pubmed: 18971310
PLoS Comput Biol. 2016 May 04;12(5):e1004842
pubmed: 27145223
Mol Ecol. 2017 Aug;26(16):4145-4157
pubmed: 28543951
Am J Hum Genet. 2016 Jan 7;98(1):116-26
pubmed: 26748515
Genome Biol. 2018 Sep 21;19(1):139
pubmed: 30241495
Bioinformatics. 2013 Jul 01;29(13):1682-4
pubmed: 23613487
PLoS Genet. 2017 Jul 27;13(7):e1006852
pubmed: 28749934
Bioinformatics. 2011 Aug 1;27(15):2156-8
pubmed: 21653522
Science. 2014 May 16;344(6185):747-50
pubmed: 24762536
Bioinformatics. 2017 Sep 1;33(17):2776-2778
pubmed: 28475694
Nature. 2015 Dec 24;528(7583):499-503
pubmed: 26595274
Sci Rep. 2020 Oct 29;10(1):18542
pubmed: 33122697
PLoS Genet. 2006 Dec;2(12):e190
pubmed: 17194218
BMC Bioinformatics. 2014 Nov 25;15:356
pubmed: 25420514
Curr Protoc Bioinformatics. 2014 Sep 08;47:11.12.1-34
pubmed: 25199790
Nat Rev Genet. 2015 Jan;16(1):33-44
pubmed: 25404112
Nat Genet. 2021 Jan;53(1):120-126
pubmed: 33414550
Am J Hum Genet. 2020 Apr 2;106(4):453-466
pubmed: 32197076
Bioinformatics. 2009 Aug 15;25(16):2078-9
pubmed: 19505943
Curr Biol. 2019 May 20;29(10):1701-1711.e16
pubmed: 31080083
Mol Biol Evol. 2007 Mar;24(3):710-22
pubmed: 17182896
PLoS One. 2018 Apr 23;13(4):e0195491
pubmed: 29684051
Eur J Hum Genet. 2017 Jun;25(7):869-876
pubmed: 28401899
Curr Biol. 2020 Nov 2;30(21):4307-4315.e13
pubmed: 32888485