Picocyanobacterial Synechococcus in marine ecosystem: Insights from genetic diversity, global distribution, and potential function.

Ecological function Niche division Phylogenetic diversity Picocyanobacteria Pigment type

Journal

Marine environmental research
ISSN: 1879-0291
Titre abrégé: Mar Environ Res
Pays: England
ID NLM: 9882895

Informations de publication

Date de publication:
May 2022
Historique:
received: 28 01 2022
revised: 01 04 2022
accepted: 05 04 2022
pubmed: 17 4 2022
medline: 25 5 2022
entrez: 16 4 2022
Statut: ppublish

Résumé

Marine Synechococcus, a main group of picocyanobacteria, has been ubiquitously observed across the global oceans. Synechococcus exhibits high phylogenetical and phenotypical diversity, and horizontal gene transfer makes its genetic evolution much more intricate. With the development of measurement technologies and analysis methods, the genomic information and niche partition of each Synechococcus lineage tend to be precisely described, but the global analysis is still lacking. Therefore, it is necessary to summarize existing studies and integrate published data to gain a comprehensive understanding of Synechococcus on genetic variation, niche division, and potential functions. In this review, the maximum likelihood trees are constructed based on existing sequence data, including both phylogenetic and pigmentary gene markers. The global distribution characteristics of abundance, lineages, and pigment types are concluded through pooled analysis of more than 700 samples obtained from approximately 50 scientific research cruises. The potential functions of Synechococcus are explored in element cycles and biological interactions. Future work on Synechococcus is suggested to focus on not only elucidating the nature of Synechococcus biodiversity but also demonstrating its interactions with the ecosystem by combining bioinformatics and macroscopic isotope-labeled environmental parameters.

Identifiants

pubmed: 35429822
pii: S0141-1136(22)00067-8
doi: 10.1016/j.marenvres.2022.105622
pii:
doi:

Types de publication

Journal Article Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

105622

Informations de copyright

Copyright © 2022 Elsevier Ltd. All rights reserved.

Auteurs

Ting Wang (T)

Key Laboratory of Coastal Biology and Biological Resource Conservation, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264000, China; CAS Key Laboratory for Experimental Study under Deep-sea Extreme Conditions, Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences, Sanya, 572000, China; University of Chinese Academy of Sciences, Beijing, China.

Jialin Li (J)

Key Laboratory of Coastal Biology and Biological Resource Conservation, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264000, China; Center for Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, 266071, China. Electronic address: jlli@yic.ac.cn.

Hongmei Jing (H)

CAS Key Laboratory for Experimental Study under Deep-sea Extreme Conditions, Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences, Sanya, 572000, China.

Song Qin (S)

Key Laboratory of Coastal Biology and Biological Resource Conservation, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264000, China; Center for Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, 266071, China.

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Classifications MeSH