Picocyanobacterial Synechococcus in marine ecosystem: Insights from genetic diversity, global distribution, and potential function.
Ecological function
Niche division
Phylogenetic diversity
Picocyanobacteria
Pigment type
Journal
Marine environmental research
ISSN: 1879-0291
Titre abrégé: Mar Environ Res
Pays: England
ID NLM: 9882895
Informations de publication
Date de publication:
May 2022
May 2022
Historique:
received:
28
01
2022
revised:
01
04
2022
accepted:
05
04
2022
pubmed:
17
4
2022
medline:
25
5
2022
entrez:
16
4
2022
Statut:
ppublish
Résumé
Marine Synechococcus, a main group of picocyanobacteria, has been ubiquitously observed across the global oceans. Synechococcus exhibits high phylogenetical and phenotypical diversity, and horizontal gene transfer makes its genetic evolution much more intricate. With the development of measurement technologies and analysis methods, the genomic information and niche partition of each Synechococcus lineage tend to be precisely described, but the global analysis is still lacking. Therefore, it is necessary to summarize existing studies and integrate published data to gain a comprehensive understanding of Synechococcus on genetic variation, niche division, and potential functions. In this review, the maximum likelihood trees are constructed based on existing sequence data, including both phylogenetic and pigmentary gene markers. The global distribution characteristics of abundance, lineages, and pigment types are concluded through pooled analysis of more than 700 samples obtained from approximately 50 scientific research cruises. The potential functions of Synechococcus are explored in element cycles and biological interactions. Future work on Synechococcus is suggested to focus on not only elucidating the nature of Synechococcus biodiversity but also demonstrating its interactions with the ecosystem by combining bioinformatics and macroscopic isotope-labeled environmental parameters.
Identifiants
pubmed: 35429822
pii: S0141-1136(22)00067-8
doi: 10.1016/j.marenvres.2022.105622
pii:
doi:
Types de publication
Journal Article
Review
Langues
eng
Sous-ensembles de citation
IM
Pagination
105622Informations de copyright
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