Five Groups in the Genus Allovahlkampfia and the Description of the New Species Vahlkampfia bulbosis n.sp.


Journal

Protist
ISSN: 1618-0941
Titre abrégé: Protist
Pays: Germany
ID NLM: 9806488

Informations de publication

Date de publication:
06 2022
Historique:
received: 11 12 2020
revised: 15 02 2022
accepted: 18 03 2022
pubmed: 1 5 2022
medline: 3 6 2022
entrez: 30 4 2022
Statut: ppublish

Résumé

Heterolobosea is one of the major protist groups in soils. While an increasing number of soil heterolobosean species has been described, we have likely only scratched the surface of heterolobosean diversity in soils. Here, we expand this knowledge by morphologically and molecularly classifying four novel strains. One was identified as Naegleria clarki, while the remaining three strains had no identical Blast hit against GenBank and could only be reliably identified to the genus level: two strains as Allovahlkampfia spp. and one strain as Vahlkampfia sp. One Allovahlkampfia strain was most closely affiliated with Allovahlkampfia sp. Nl64 and the other strain was affiliated with 'Solumitrus' palustris, which is now named Allovahlkampfia palustris comb.nov. As there are only two valid species described within Allovahlkampfia, we combined all published sequences related to Allovahlkampfia and propose five new groups within this genus. The last strain was most closely related, but clearly distinct from, Vahlkampfia orchilla, based on DNA barcoding. As such, we propose this amoeba as a new species named Vahlkampfia bulbosis n.sp. Together, our study extends the described diversity of soil heteroloboseans through the description of a new Vahlkampfia species and by revising the morphologically and phylogenetically diverse genus Allovahlkampfia.

Identifiants

pubmed: 35489252
pii: S1434-4610(22)00015-3
doi: 10.1016/j.protis.2022.125870
pii:
doi:

Substances chimiques

DNA, Bacterial 0
RNA, Ribosomal, 16S 0
Soil 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

125870

Informations de copyright

Copyright © 2022 The Author(s). Published by Elsevier GmbH.. All rights reserved.

Auteurs

Zhilei Gao (Z)

Institue of Environmental Biology, Ecology&Biodiversity, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands. Electronic address: z.gao@uu.nl.

Alexandre Jousset (A)

Institue of Environmental Biology, Ecology&Biodiversity, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands.

George A Kowalchuk (GA)

Institue of Environmental Biology, Ecology&Biodiversity, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands.

Stefan Geisen (S)

Department of Plant Science, Laboratory of Nematology, Wageningen University, 6700 ES Wageningen, the Netherlands.

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Classifications MeSH