Modeling cell biological features of meiotic chromosome pairing to study interlock resolution.
Journal
PLoS computational biology
ISSN: 1553-7358
Titre abrégé: PLoS Comput Biol
Pays: United States
ID NLM: 101238922
Informations de publication
Date de publication:
06 2022
06 2022
Historique:
received:
08
01
2022
accepted:
25
05
2022
revised:
24
06
2022
pubmed:
14
6
2022
medline:
29
6
2022
entrez:
13
6
2022
Statut:
epublish
Résumé
During meiosis, homologous chromosomes become associated side by side in a process known as homologous chromosome pairing. Pairing requires long range chromosome motion through a nucleus that is full of other chromosomes. It remains unclear how the cell manages to align each pair of chromosomes quickly while mitigating and resolving interlocks. Here, we use a coarse-grained molecular dynamics model to investigate how specific features of meiosis, including motor-driven telomere motion, nuclear envelope interactions, and increased nuclear size, affect the rate of pairing and the mitigation/resolution of interlocks. By creating in silico versions of three yeast strains and comparing the results of our model to experimental data, we find that a more distributed placement of pairing sites along the chromosome is necessary to replicate experimental findings. Active motion of the telomeric ends speeds up pairing only if binding sites are spread along the chromosome length. Adding a meiotic bouquet significantly speeds up pairing but does not significantly change the number of interlocks. An increase in nuclear size slows down pairing while greatly reducing the number of interlocks. Interestingly, active forces increase the number of interlocks, which raises the question: How do these interlocks resolve? Our model gives us detailed movies of interlock resolution events which we then analyze to build a step-by-step recipe for interlock resolution. In our model, interlocks must first translocate to the ends, where they are held in a quasi-stable state by a large number of paired sites on one side. To completely resolve an interlock, the telomeres of the involved chromosomes must come in close proximity so that the cooperativity of pairing coupled with random motion causes the telomeres to unwind. Together our results indicate that computational modeling of homolog pairing provides insight into the specific cell biological changes that occur during meiosis.
Identifiants
pubmed: 35696428
doi: 10.1371/journal.pcbi.1010252
pii: PCOMPBIOL-D-22-00033
pmc: PMC9232156
doi:
Types de publication
Journal Article
Research Support, U.S. Gov't, Non-P.H.S.
Research Support, N.I.H., Extramural
Langues
eng
Sous-ensembles de citation
IM
Pagination
e1010252Subventions
Organisme : NIGMS NIH HHS
ID : R01 GM116895
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM137126
Pays : United States
Organisme : NIGMS NIH HHS
ID : R35 GM130327
Pays : United States
Organisme : NIGMS NIH HHS
ID : T32 GM008284
Pays : United States
Déclaration de conflit d'intérêts
The authors have declared that no competing interests exist.
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