HGCA2.0: An RNA-Seq Based Webtool for Gene Coexpression Analysis in

Humans Gene Expression Profiling Gene Regulatory Networks RNA-Seq Transcription Factors Genes / genetics
RNA-Seq bioinformatics co-expression gene coexpression analysis gene coexpression network transcriptomics webtool

Journal

Cells
ISSN: 2073-4409
Titre abrégé: Cells
Pays: Switzerland
ID NLM: 101600052

Informations de publication

Date de publication:
21 01 2023
Historique:
received: 22 11 2022
revised: 09 01 2023
accepted: 19 01 2023
entrez: 11 2 2023
pubmed: 12 2 2023
medline: 15 2 2023
Statut: epublish

Résumé

Genes with similar expression patterns in a set of diverse samples may be considered coexpressed. Human Gene Coexpression Analysis 2.0 (HGCA2.0) is a webtool which studies the global coexpression landscape of human genes. The website is based on the hierarchical clustering of 55,431

Identifiants

DOI: 10.3390/cells12030388 PMID: 36766730 PMC: PMC9913097
pubmed: 36766730
pii: cells12030388
doi: 10.3390/cells12030388
pmc: PMC9913097
pii:
doi:

Substances chimiques

Transcription Factors 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

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Auteurs

Vasileios L Zogopoulos (VL)

Centre of Systems Biology, Biomedical Research Foundation, Academy of Athens, 11527 Athens, Greece.
Section of Cell Biology and Biophysics, Department of Biology, National and Kapodistrian University of Athens, 15701 Athens, Greece.
ORCID: 0000-0002-4646-5570

Apostolos Malatras (A)

Biobank.cy Center of Excellence in Biobanking and Biomedical Research, University of Cyprus, 2029 Nicosia, Cyprus.
ORCID: 0000-0003-1380-5521

Konstantinos Kyriakidis (K)

Centre of Systems Biology, Biomedical Research Foundation, Academy of Athens, 11527 Athens, Greece.
School of Pharmacy, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece.
ORCID: 0000-0002-1696-4838

Chrysanthi Charalampous (C)

Centre of Basic Research, Biomedical Research Foundation, Academy of Athens, 11527 Athens, Greece.

Evanthia A Makrygianni (EA)

University Research Institute of Maternal and Child Health and Precision Medicine, National and Kapodistrian University of Athens, 11527 Athens, Greece.

Stéphanie Duguez (S)

Personalised Medicine Centre, School of Medicine, Ulster University, Derry-Londonderry BT47 6SB, UK.
ORCID: 0000-0001-6510-5426

Marianna A Koutsi (MA)

Centre of Basic Research, Biomedical Research Foundation, Academy of Athens, 11527 Athens, Greece.
ORCID: 0000-0002-9182-5555

Marialena Pouliou (M)

Centre of Basic Research, Biomedical Research Foundation, Academy of Athens, 11527 Athens, Greece.

Christos Vasileiou (C)

Centre of Systems Biology, Biomedical Research Foundation, Academy of Athens, 11527 Athens, Greece.
Engineering Design and Computing Laboratory, ETH Zurich, 8092 Zurich, Switzerland.

William J Duddy (WJ)

Personalised Medicine Centre, School of Medicine, Ulster University, Derry-Londonderry BT47 6SB, UK.
ORCID: 0000-0003-2239-9094

Marios Agelopoulos (M)

Centre of Basic Research, Biomedical Research Foundation, Academy of Athens, 11527 Athens, Greece.

George P Chrousos (GP)

University Research Institute of Maternal and Child Health and Precision Medicine, National and Kapodistrian University of Athens, 11527 Athens, Greece.
ORCID: 0000-0002-3098-5264

Vassiliki A Iconomidou (VA)

Section of Cell Biology and Biophysics, Department of Biology, National and Kapodistrian University of Athens, 15701 Athens, Greece.
ORCID: 0000-0002-9472-5146

Ioannis Michalopoulos (I)

Centre of Systems Biology, Biomedical Research Foundation, Academy of Athens, 11527 Athens, Greece.
ORCID: 0000-0001-8991-8712

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Classifications MeSH

questionsmedicales.fr › Eucaryotes › Animaux › Chordés › Vertébrés › Mammifères › Eutheria › Primates › Haplorhini › Catarrhini › Hominidae › Humains › HGCA2.0: An RNA-Seq Based Webtool for Gene...
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de profil d'expression de gènes › HGCA2.0: An RNA-Seq Based Webtool for Gene...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Séquences d'acides nucléiques régulatrices › Réseaux de régulation génique › HGCA2.0: An RNA-Seq Based Webtool for Gene...
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de séquence › Analyse de séquence d'ARN › RNA-Seq › HGCA2.0: An RNA-Seq Based Webtool for Gene...
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Facteurs de transcription › HGCA2.0: An RNA-Seq Based Webtool for Gene...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Composants de génome › Gènes › HGCA2.0: An RNA-Seq Based Webtool for Gene...