Comparative chloroplast genomics of three species of

DNA, Chloroplast Phylogeny Orchidaceae / genetics Genomics Chloroplasts / genetics
Bulbophyllum Chloroplast genome New species Orchidaceae Phylogenetic position

Journal

PeerJ
ISSN: 2167-8359
Titre abrégé: PeerJ
Pays: United States
ID NLM: 101603425

Informations de publication

Date de publication:
2023
Historique:
received: 17 06 2022
accepted: 19 12 2022
entrez: 16 2 2023
pubmed: 17 2 2023
medline: 18 2 2023
Statut: epublish

Résumé

Chloroplast (cp) genomes are useful and informative molecular markers used for species determination and phylogenetic analysis. Based on comparative morphological and genomic analysis, a new species The new species is morphologically similar to The taxonomic status of the new species is strongly supported by cp genome data. Our study highlights the importance of using the complete cp genome to identify species, elucidate the taxonomy, and reconstruct the phylogeny of plant groups with complicated taxonomic problems.

Sections du résumé

Background
Chloroplast (cp) genomes are useful and informative molecular markers used for species determination and phylogenetic analysis.
Methods
Based on comparative morphological and genomic analysis, a new species
Results
The new species is morphologically similar to
Discussion
The taxonomic status of the new species is strongly supported by cp genome data. Our study highlights the importance of using the complete cp genome to identify species, elucidate the taxonomy, and reconstruct the phylogeny of plant groups with complicated taxonomic problems.

Identifiants

DOI: 10.7717/peerj.14721 PMID: 36793888 PMC: PMC9924136
pubmed: 36793888
doi: 10.7717/peerj.14721
pii: 14721
pmc: PMC9924136
doi:

Substances chimiques

DNA, Chloroplast 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e14721

Informations de copyright

©2023 Li et al.

Déclaration de conflit d'intérêts

The authors declare there are no competing interests.

Références

Genome Biol. 2020 Sep 10;21(1):241
pubmed: 32912315
Front Plant Sci. 2020 Jul 03;11:799
pubmed: 32719690
Mol Phylogenet Evol. 2020 Feb;143:106689
pubmed: 31751610
BMC Evol Biol. 2019 Apr 24;19(1):93
pubmed: 31014234
Nucleic Acids Res. 2019 Jul 2;47(W1):W65-W73
pubmed: 31066451
Nucleic Acids Res. 2019 Jul 2;47(W1):W59-W64
pubmed: 30949694
Sci Rep. 2017 Apr 12;7:46040
pubmed: 28401958
PhytoKeys. 2019 Aug 29;130:33-39
pubmed: 31534392
PhytoKeys. 2016 Jun 30;(65):107-12
pubmed: 27489491
Nucleic Acids Res. 2017 Jul 3;45(W1):W6-W11
pubmed: 28486635
PeerJ. 2019 Jan 17;7:e6244
pubmed: 30671303
Mol Phylogenet Evol. 2018 Dec;129:15-26
pubmed: 30026123
Plant Divers. 2021 Jan 28;43(5):350-361
pubmed: 34816061

Auteurs

Mengkai Li (M)

Southeast Asia Biodiversity Research Institute, Chinese Academy of Sciences & Center for Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan, China.
Resources & Environment College, Tibet Agriculture & Animal Husbandry University, Nyingchi, China.

Lu Tang (L)

Center for Gardening and Horticulture, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan, China.

Jianping Deng (J)

Southeast Asia Biodiversity Research Institute, Chinese Academy of Sciences & Center for Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan, China.

Hanqing Tang (H)

School of Resources and Environmental Science, Hubei University, Wuhan, China.

Shicheng Shao (S)

CAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan, China.

Zhen Xing (Z)

Resources & Environment College, Tibet Agriculture & Animal Husbandry University, Nyingchi, China.

Yan Luo (Y)

Southeast Asia Biodiversity Research Institute, Chinese Academy of Sciences & Center for Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan, China.

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Classifications MeSH

questionsmedicales.fr › Acides nucléiques, nucléotides et nucléosides › Acides nucléiques › ADN › ADN des plantes › ADN des chloroplastes › Comparative chloroplast genomics of three species of
questionsmedicales.fr › Sciences de l'information › Phylogenèse › Comparative chloroplast genomics of three species of
questionsmedicales.fr › Eucaryotes › Viridiplantae › Streptophyta › Embryophyta › Tracheobionta › Magnoliopsida › Lilianae › Asparagales › Orchidaceae › Comparative chloroplast genomics of three species of
questionsmedicales.fr › Disciplines des sciences naturelles › Disciplines des sciences biologiques › Biologie › Génétique › Génomique › Comparative chloroplast genomics of three species of
questionsmedicales.fr › Cellules › Structures cellulaires › Espace intracellulaire › Cytoplasme › Structures cytoplasmiques › Organites › Plastes › Chloroplastes › Comparative chloroplast genomics of three species of