Discovery of an Abundant Viral Genus in Polar Regions through the Isolation and Genomic Characterization of a New Virus against

Oceanospimyovirus Oceanospirillum phage vB_OsaM_PD0307 ecological distribution genomic and phylogenetic analysis

Journal

Applied and environmental microbiology
ISSN: 1098-5336
Titre abrégé: Appl Environ Microbiol
Pays: United States
ID NLM: 7605801

Informations de publication

Date de publication:
26 04 2023
Historique:
medline: 28 4 2023
pubmed: 29 3 2023
entrez: 28 3 2023
Statut: ppublish

Résumé

The marine bacterial family

Identifiants

pubmed: 36975807
doi: 10.1128/aem.01896-22
pmc: PMC10132091
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0189622

Références

ISME J. 2018 Sep;12(9):2103-2113
pubmed: 29875434
Environ Microbiol. 2019 Jun;21(6):2129-2147
pubmed: 30920125
Environ Sci Technol. 2013 Oct 1;47(19):10860-7
pubmed: 23937111
Proc Natl Acad Sci U S A. 2012 Dec 11;109(50):20229-34
pubmed: 21768331
PeerJ. 2021 May 6;9:e11396
pubmed: 33996289
Appl Environ Microbiol. 2001 Dec;67(12):5392-402
pubmed: 11722884
Curr Top Microbiol Immunol. 2017;400:105-127
pubmed: 28124151
Front Microbiol. 2020 Oct 27;11:604618
pubmed: 33193286
Virology. 2016 Dec;499:219-229
pubmed: 27693926
Nat Rev Microbiol. 2007 Oct;5(10):801-12
pubmed: 17853907
Nature. 2005 Sep 15;437(7057):356-61
pubmed: 16163346
Nucleic Acids Res. 2019 Jul 2;47(W1):W5-W10
pubmed: 31062021
Appl Microbiol Biotechnol. 2013 Sep;97(18):8023-9
pubmed: 23807666
Bioinformatics. 2012 Dec 1;28(23):3150-2
pubmed: 23060610
Int J Syst Evol Microbiol. 2016 Feb;66(2):1100-1103
pubmed: 26585518
Front Microbiol. 2022 Jan 27;13:722900
pubmed: 35154048
Cell Signal. 2013 Jul;25(7):1608-13
pubmed: 23602932
Nucleic Acids Res. 2021 Jan 8;49(D1):D764-D775
pubmed: 33137183
Sci Rep. 2021 May 31;11(1):11316
pubmed: 34059729
Elife. 2017 Aug 17;6:
pubmed: 28826484
Front Microbiol. 2021 Feb 04;11:598692
pubmed: 33613462
FEMS Microbiol Rev. 2013 Jul;37(4):554-71
pubmed: 23043507
BMC Genomics. 2021 Sep 20;22(1):675
pubmed: 34544379
Viruses. 2016 Mar 01;8(3):66
pubmed: 26938550
Biochem Biophys Res Commun. 2011 Jun 24;410(1):52-6
pubmed: 21635871
PLoS One. 2013;8(2):e57355
pubmed: 23468974
Nucleic Acids Res. 2001 Jun 15;29(12):2607-18
pubmed: 11410670
Appl Environ Microbiol. 2006 Jun;72(6):4338-46
pubmed: 16751549
J Bacteriol. 2013 Nov;195(22):5025-40
pubmed: 23995641
ISME J. 2016 Feb;10(2):400-15
pubmed: 26230048
Angew Chem Int Ed Engl. 2000 Jun 16;39(12):2042-2052
pubmed: 10941016
Nat Biotechnol. 2021 May;39(5):578-585
pubmed: 33349699
Eur J Biochem. 1983 Jan 17;130(1):53-69
pubmed: 6825689
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
Nucleic Acids Res. 2013 Jul;41(12):e121
pubmed: 23598997
PLoS One. 2008 Apr 23;3(4):e2048
pubmed: 18431505
Microbiol Mol Biol Rev. 2005 Jun;69(2):326-56
pubmed: 15944459
Arch Virol. 2021 Sep;166(9):2633-2648
pubmed: 34231026
Int J Syst Evol Microbiol. 2014 Feb;64(Pt 2):346-351
pubmed: 24505072
Nucleic Acids Res. 2015 Jul 1;43(W1):W39-49
pubmed: 25953851
Scand J Infect Dis Suppl. 1984;42:17-37
pubmed: 6597561
Bioinformatics. 2017 Aug 01;33(15):2379-2380
pubmed: 28379287
J Bacteriol. 2004 Jul;186(13):4369-75
pubmed: 15205439
Nucleic Acids Res. 2021 Jul 2;49(W1):W293-W296
pubmed: 33885785
Mol Microbiol. 2012 Jul;85(2):314-25
pubmed: 22640804
Microb Genom. 2021 Jul;7(7):
pubmed: 34227930
Sci Rep. 2017 Aug 15;7(1):8292
pubmed: 28811656
Proc Natl Acad Sci U S A. 2012 Mar 20;109(12):4544-9
pubmed: 22388749
Front Microbiol. 2017 Jun 09;8:1018
pubmed: 28649233
J Virol. 2012 Aug;86(16):8909-10
pubmed: 22843865
Cell. 2019 May 16;177(5):1109-1123.e14
pubmed: 31031001
Mol Biol Evol. 2020 May 1;37(5):1530-1534
pubmed: 32011700
Front Microbiol. 2015 Oct 26;6:1090
pubmed: 26579075
Nat Rev Microbiol. 2020 Mar;18(3):125-138
pubmed: 32015529
Microbiome. 2019 Feb 20;7(1):29
pubmed: 30786927
Gigascience. 2020 Sep 1;9(9):
pubmed: 32893860
Nature. 2013 Feb 21;494(7437):357-60
pubmed: 23407494
Bioinformatics. 2017 Nov 01;33(21):3396-3404
pubmed: 29036289
Genes (Basel). 2019 Mar 01;10(3):
pubmed: 30832293
Sci Rep. 2015 Nov 16;5:16663
pubmed: 26567959
Nat Commun. 2013;4:2156
pubmed: 23877221
Genome Res. 2009 Jun;19(6):1117-23
pubmed: 19251739
Bioinformatics. 2018 Sep 15;34(18):3094-3100
pubmed: 29750242
Nature. 1982 Sep 30;299(5882):469-70
pubmed: 7121588
J Hyg (Lond). 1936 Jun;36(2):204-35
pubmed: 20475326
Microbiome. 2019 Apr 12;7(1):47
pubmed: 30975208
Nat Rev Microbiol. 2017 Mar;15(3):161-168
pubmed: 28134265
Nat Biotechnol. 2019 Jun;37(6):632-639
pubmed: 31061483
Protein Sci. 2004 Apr;13(4):854-61
pubmed: 15044722

Auteurs

Wenjing Zhang (W)

College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, Frontiers Science Center for Deep Ocean Multispheres and Earth System, Center for Ocean Carbon Neutrality, Ocean University of China, Qingdao, China.
School of Oceanography, Shanghai Jiao Tong University, Shanghai, China.

Yundan Liu (Y)

College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, Frontiers Science Center for Deep Ocean Multispheres and Earth System, Center for Ocean Carbon Neutrality, Ocean University of China, Qingdao, China.

Kaiyang Zheng (K)

College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, Frontiers Science Center for Deep Ocean Multispheres and Earth System, Center for Ocean Carbon Neutrality, Ocean University of China, Qingdao, China.

Jinyan Xing (J)

The Affiliated Hospital of Qingdao University, Qingdao, China.

Qian Li (Q)

School of Oceanography, Shanghai Jiao Tong University, Shanghai, China.

Chengxiang Gu (C)

College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, Frontiers Science Center for Deep Ocean Multispheres and Earth System, Center for Ocean Carbon Neutrality, Ocean University of China, Qingdao, China.

Ziyue Wang (Z)

College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, Frontiers Science Center for Deep Ocean Multispheres and Earth System, Center for Ocean Carbon Neutrality, Ocean University of China, Qingdao, China.

Hongbing Shao (H)

College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, Frontiers Science Center for Deep Ocean Multispheres and Earth System, Center for Ocean Carbon Neutrality, Ocean University of China, Qingdao, China.
UMT-OUC Joint Centre for Marine Studies, Qingdao, China.

Cui Guo (C)

College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, Frontiers Science Center for Deep Ocean Multispheres and Earth System, Center for Ocean Carbon Neutrality, Ocean University of China, Qingdao, China.
UMT-OUC Joint Centre for Marine Studies, Qingdao, China.

Hui He (H)

College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, Frontiers Science Center for Deep Ocean Multispheres and Earth System, Center for Ocean Carbon Neutrality, Ocean University of China, Qingdao, China.
UMT-OUC Joint Centre for Marine Studies, Qingdao, China.

Hualong Wang (H)

College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, Frontiers Science Center for Deep Ocean Multispheres and Earth System, Center for Ocean Carbon Neutrality, Ocean University of China, Qingdao, China.
UMT-OUC Joint Centre for Marine Studies, Qingdao, China.

Yeong Yik Sung (YY)

UMT-OUC Joint Centre for Marine Studies, Qingdao, China.
Institute of Marine Biotechnology, Universiti Malaysia Terengganu (UMT), Kuala Nerus, Malaysia.

Wen Jye Mok (WJ)

UMT-OUC Joint Centre for Marine Studies, Qingdao, China.
Institute of Marine Biotechnology, Universiti Malaysia Terengganu (UMT), Kuala Nerus, Malaysia.

Li Lian Wong (LL)

UMT-OUC Joint Centre for Marine Studies, Qingdao, China.
Institute of Marine Biotechnology, Universiti Malaysia Terengganu (UMT), Kuala Nerus, Malaysia.

Yantao Liang (Y)

College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, Frontiers Science Center for Deep Ocean Multispheres and Earth System, Center for Ocean Carbon Neutrality, Ocean University of China, Qingdao, China.
UMT-OUC Joint Centre for Marine Studies, Qingdao, China.

Andrew McMinn (A)

College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, Frontiers Science Center for Deep Ocean Multispheres and Earth System, Center for Ocean Carbon Neutrality, Ocean University of China, Qingdao, China.
Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia.

Min Wang (M)

College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, Frontiers Science Center for Deep Ocean Multispheres and Earth System, Center for Ocean Carbon Neutrality, Ocean University of China, Qingdao, China.
The Affiliated Hospital of Qingdao University, Qingdao, China.
UMT-OUC Joint Centre for Marine Studies, Qingdao, China.
Haide College, Ocean University of China, Qingdao, China.

Articles similaires

Genome, Chloroplast Phylogeny Genetic Markers Base Composition High-Throughput Nucleotide Sequencing
Animals Hemiptera Insect Proteins Phylogeny Insecticides
Amaryllidaceae Alkaloids Lycoris NADPH-Ferrihemoprotein Reductase Gene Expression Regulation, Plant Plant Proteins
Drought Resistance Gene Expression Profiling Gene Expression Regulation, Plant Gossypium Multigene Family

Classifications MeSH