Core-Genome Multilocus Sequence Typing for Epidemiological and Evolutionary Analyses of Phytopathogenic Xanthomonas citri.


Journal

Applied and environmental microbiology
ISSN: 1098-5336
Titre abrégé: Appl Environ Microbiol
Pays: United States
ID NLM: 7605801

Informations de publication

Date de publication:
31 05 2023
Historique:
medline: 2 6 2023
pubmed: 18 4 2023
entrez: 17 4 2023
Statut: ppublish

Résumé

Xanthomonas citri subsp.

Identifiants

pubmed: 37067413
doi: 10.1128/aem.02101-22
pmc: PMC10231234
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0210122

Subventions

Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/S018891/1
Pays : United Kingdom
Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/R022720/1
Pays : United Kingdom

Déclaration de conflit d'intérêts

The authors declare no conflict of interest.

Références

Genome Res. 2018 Sep;28(9):1395-1404
pubmed: 30049790
Genome Announc. 2013 May 16;1(3):
pubmed: 23682143
Bioinformatics. 2015 Nov 15;31(22):3691-3
pubmed: 26198102
Appl Environ Microbiol. 2014 Oct;80(20):6266-79
pubmed: 25085494
Microbiology (Reading). 2012 Apr;158(Pt 4):1005-1015
pubmed: 22282518
Nucleic Acids Res. 2021 Jul 2;49(W1):W293-W296
pubmed: 33885785
N Engl J Med. 2019 Dec 26;381(26):2569-2580
pubmed: 31881145
Genome Announc. 2013 Aug 29;1(4):
pubmed: 23990578
Genome Announc. 2014 Sep 25;2(5):
pubmed: 25291773
J Comput Biol. 2012 May;19(5):455-77
pubmed: 22506599
Appl Environ Microbiol. 2008 May;74(10):3295-301
pubmed: 18359831
Front Microbiol. 2015 Oct 07;6:1080
pubmed: 26500625
Nat Rev Microbiol. 2013 Oct;11(10):728-36
pubmed: 23979428
Phytopathology. 2007 Dec;97(12):1568-77
pubmed: 18943717
Appl Environ Microbiol. 2017 Apr 17;83(9):
pubmed: 28258140
BMC Genomics. 2013 Nov 06;14:761
pubmed: 24195767
BMC Genomics. 2010 Apr 13;11:238
pubmed: 20388224
Mol Plant Pathol. 2018 Jun;19(6):1302-1318
pubmed: 29105297
BMC Genomics. 2017 Aug 30;18(1):670
pubmed: 28854875
Genome Biol Evol. 2019 May 1;11(5):1380-1384
pubmed: 31028379
BMC Genomics. 2015 Dec 23;16:1098
pubmed: 26699528
J Bacteriol. 2012 May;194(9):2395
pubmed: 22493202
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
BMC Genomics. 2019 Sep 9;20(1):700
pubmed: 31500575
Mol Biol Evol. 2021 Jun 25;38(7):3022-3027
pubmed: 33892491
J Bacteriol. 2012 Jun;194(11):3031
pubmed: 22582385
Nat Rev Microbiol. 2020 Aug;18(8):415-427
pubmed: 32346148
Genome Announc. 2013 Dec 12;1(6):
pubmed: 24336374
Nature. 2002 May 23;417(6887):459-63
pubmed: 12024217
Mol Plant Pathol. 2003 May 1;4(3):141-57
pubmed: 20569374
FEMS Microbiol Rev. 2010 Mar;34(2):107-33
pubmed: 19925633
Bioinformatics. 2015 Sep 1;31(17):2877-8
pubmed: 25913206
BMC Genomics. 2018 Jan 4;19(1):16
pubmed: 29301493
Genome Biol. 2019 Nov 28;20(1):257
pubmed: 31779668
Microbiol Resour Announc. 2018 Sep 27;7(12):
pubmed: 30533651
Wellcome Open Res. 2018 Sep 24;3:124
pubmed: 30345391
Bioinformatics. 2014 Jul 15;30(14):2068-9
pubmed: 24642063
ISME J. 2015 Oct;9(10):2128-38
pubmed: 25689023

Auteurs

R Ragupathy (R)

Department of Life Sciences, Manchester Metropolitan University, Manchester, United Kingdom.

K A Jolley (KA)

Department of Biology, University of Oxford, Oxford, United Kingdom.

C Zamuner (C)

Departamento de Biologia Geral e Aplicada, Universidade Estadual Paulista, Rio Claro, São Paulo, Brazil.

J B Jones (JB)

Department of Plant Pathology, University of Florida, Gainesville, Florida, USA.

J Redfern (J)

Department of Life Sciences, Manchester Metropolitan University, Manchester, United Kingdom.

F Behlau (F)

Fundecitrus, Araraquara, São Paulo, Brazil.

H Ferreira (H)

Departamento de Biologia Geral e Aplicada, Universidade Estadual Paulista, Rio Claro, São Paulo, Brazil.

M C Enright (MC)

Department of Life Sciences, Manchester Metropolitan University, Manchester, United Kingdom.

Articles similaires

Genome, Chloroplast Phylogeny Genetic Markers Base Composition High-Throughput Nucleotide Sequencing
Coal Metagenome Phylogeny Bacteria Genome, Bacterial
Genome, Viral Ralstonia Composting Solanum lycopersicum Bacteriophages

Classifications MeSH