Ab initio study of molecular properties of l-tyrosine.

Ab initio calculations Electronic structure Molecular descriptors Molecular properties l-Tyrosine

Journal

Journal of molecular modeling
ISSN: 0948-5023
Titre abrégé: J Mol Model
Pays: Germany
ID NLM: 9806569

Informations de publication

Date de publication:
13 Jul 2023
Historique:
received: 28 05 2023
accepted: 03 07 2023
medline: 17 7 2023
pubmed: 14 7 2023
entrez: 13 7 2023
Statut: epublish

Résumé

l-Tyrosine is a naturally occurring agent that acts as a precursor in biosynthesis of monoaminergic neurotransmitters in brain such as dopamine, adrenaline, noradrenaline, and hormones like thyroxine and triiodothyronine. While l-tyrosine in vacuo adopts the canonical aminoacid form with -NH The energetic data at the Hartree-Fock MO-LCAO-SCF method has been conducted using def2-TZVP basis set, and improved by the many-body perturbation theory using the MP2 correction to the correlation energy. For the aminoacid form and the zwitterionic form of l-tyrosine, a set of molecular descriptors has been evaluated (ionization energy, electron affinity, molecular electronegativity, chemical hardness, electrophilicity index, dipole moment, quadrupole moment, and dipole polarizability). The solvent effect (CPCM) is very expressive to the zwitterionic form and alters the sign of the electron affinity from positive to negative values. In parallel, density-functional theory with B3LYP variant in the same basis set has been employed for full geometry optimization of the neutral and ionized forms of l-tyrosine allowing assessing the adiabatic (a) ionization/affinity processes. The complete vibrational analysis enables evaluating thermodynamic functions such as the inner energy, enthalpy, entropy, Gibbs energy, and consequently the absolute oxidation and reduction potentials. Of applied methods, the most reliable are B3LYP(a) results that account to the correlation energy and the electron and nuclear relaxation during the ionization/affinity processes.

Identifiants

pubmed: 37442864
doi: 10.1007/s00894-023-05648-8
pii: 10.1007/s00894-023-05648-8
pmc: PMC10344843
doi:

Substances chimiques

Tyrosine 42HK56048U
Amines 0
Amino Acids 0
Norepinephrine X4W3ENH1CV

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

245

Subventions

Organisme : Vedecká Grantová Agentúra MŠVVaŠ SR a SAV
ID : VEGA 1/0191/22

Informations de copyright

© 2023. The Author(s).

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Auteurs

Roman Boča (R)

Faculty of Health Sciences, University of SS Cyril and Methodius, 91701, Trnava, Slovakia. roman.boca@ucm.sk.

Juraj Štofko (J)

Faculty of Health Sciences, University of SS Cyril and Methodius, 91701, Trnava, Slovakia.

Richard Imrich (R)

Faculty of Health Sciences, University of SS Cyril and Methodius, 91701, Trnava, Slovakia.

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Classifications MeSH