A chromosome-level reference genome of an aromatic medicinal plant Adenosma buchneroides.

Chromosomes Genome, Plant Phylogeny Plantaginaceae / genetics Plants, Medicinal / genetics

Journal

Scientific data
ISSN: 2052-4463
Titre abrégé: Sci Data
Pays: England
ID NLM: 101640192

Informations de publication

Date de publication:
28 09 2023
Historique:
received: 09 06 2023
accepted: 14 09 2023
medline: 2 10 2023
pubmed: 29 9 2023
entrez: 28 9 2023
Statut: epublish

Résumé

Adenosma buchneroides Bonati, belonging to the genus Adenosum (Plantaginaceae), is an aromatic medicinal plant and utilized in traditional Chinese medicine. It has been widely used as plant-based repellents to prevent vector-borne diseases. However, the lack of a reference genome limits the study of conservation management and molecular biology of A. buchneroides. Here, we generated a chromosome-level de novo genome assembly of A. buchneroides which is a high-quality chromosome-scale assembly of aromatic medicinal plant in Plantaginaceae. The genome has a total length of 442.84 Mb with scaffold N50 of 27.98 Mb and 95.55% of the genome assigned to 14 chromosomes. BUSCO assessment yielded a completeness score of 97.2%. Furthermore, we predicted 24,367 protein-coding genes, and 95.79% of them was functionally annotated. The chromosome-scale genome of A. buchneroides will be a significant resource for understanding the genetic basis and evolution of active components biosynthesis, which will facilitate further study and exploit of A. buchneroides.

Identifiants

DOI: 10.1038/s41597-023-02571-8 PMID: 37770464 PMC: PMC10539347
pubmed: 37770464
doi: 10.1038/s41597-023-02571-8
pii: 10.1038/s41597-023-02571-8
pmc: PMC10539347
doi:

Types de publication

Dataset Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

660

Informations de copyright

© 2023. Springer Nature Limited.

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Auteurs

Hui Huang (H)

Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China.
Key Laboratory of Research and Utilization of Ethnomedicinal Plant Resources of Hunan Province, College of Biological and Food Engineering, Huaihua University, Huaihua, 418000, China.
ORCID: 0000-0003-1212-496X

Chen Wang (C)

Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China.

Shengji Pei (S)

Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China.

Yuhua Wang (Y)

Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China. wangyuhua@mail.kib.ac.cn.

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Classifications MeSH

questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Chromosomes › A chromosome-level reference genome of an...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Génome végétal › A chromosome-level reference genome of an...
questionsmedicales.fr › Sciences de l'information › Phylogenèse › A chromosome-level reference genome of an...
questionsmedicales.fr › Eucaryotes › Viridiplantae › Streptophyta › Embryophyta › Tracheobionta › Magnoliopsida › Lamiales › Plantaginaceae › A chromosome-level reference genome of an...
questionsmedicales.fr › Eucaryotes › Plantes › Plantes médicinales › A chromosome-level reference genome of an...