Innovative construction of the first reliable catalogue of bovine circular RNAs.

RNA, Circular / genetics Animals Cattle Exons Introns Computational Biology / methods Transcriptome Gene Expression Profiling / methods Sequence Analysis, RNA / methods
Exonic circRNA artificial annotation artificial circRNA backsplicing bovine circRNAs circular transcriptome intron circle lariat-derived circRNA

Journal

RNA biology
ISSN: 1555-8584
Titre abrégé: RNA Biol
Pays: United States
ID NLM: 101235328

Informations de publication

Date de publication:
Jan 2024
Historique:
medline: 11 7 2024
pubmed: 11 7 2024
entrez: 11 7 2024
Statut: ppublish

Résumé

The aim of this study was to compare the circular transcriptome of divergent tissues in order to understand: i) the presence of circular RNAs (circRNAs) that are not exonic circRNAs, i.e. originated from backsplicing involving known exons and, ii) the origin of artificial circRNA (artif_circRNA), i.e. circRNA not generated

Identifiants

DOI: 10.1080/15476286.2024.2375090 PMID: 38989833
pubmed: 38989833
doi: 10.1080/15476286.2024.2375090
doi:

Substances chimiques

RNA, Circular 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

52-74

Auteurs

Annie Robic (A)

GenPhySE, Université de Toulouse, INRAE, ENVT, Castanet-Tolosan, France.
ORCID: 0000-0003-3071-8614

Frieder Hadlich (F)

Institute of Genome Biology, Research Institute for Farm Animal Biology (FBN), Dummerstorf, Germany.
ORCID: 0000-0002-1158-4860

Gabriel Costa Monteiro Moreira (G)

Unit of Animal Genomics, GIGA Institute, University of Liège, Liège, Belgium.
ORCID: 0000-0003-3139-1027

Emily Louise Clark (E)

The Roslin Institute, University of Edinburgh, Edinburgh, UK.
ORCID: 0000-0002-9550-7407

Graham Plastow (G)

Department of Agricultural, Food and Nutritional Science, Livestock Gentec, University of Alberta, Edmonton, AB, Canada.
ORCID: 0000-0002-3774-3110

Carole Charlier (C)

Unit of Animal Genomics, GIGA Institute, University of Liège, Liège, Belgium.
Faculty of Veterinary Medicine, University of Liège, Liège, Belgium.
ORCID: 0000-0002-9694-094X

Christa Kühn (C)

Institute of Genome Biology, Research Institute for Farm Animal Biology (FBN), Dummerstorf, Germany.
Faculty of Agricultural and Environmental Sciences, University of Rostock, Rostock, Germany.
Friedrich Loeffler Institute, Federal Research Institute for Animal Health, Greifswald - Insel Riems, Germany.
ORCID: 0000-0002-0216-424X

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Classifications MeSH

questionsmedicales.fr › Acides nucléiques, nucléotides et nucléosides › Acides nucléiques › ARN › ARN circulaire › Innovative construction of the first reliable...
questionsmedicales.fr › Eucaryotes › Animaux › Innovative construction of the first reliable...
questionsmedicales.fr › Eucaryotes › Animaux › Chordés › Vertébrés › Mammifères › Eutheria › Artiodactyla › Ruminants › Bovins › Innovative construction of the first reliable...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Composants de génome › Gènes › Composants de gène › Exons › Innovative construction of the first reliable...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Composants de génome › Gènes › Composants de gène › Introns › Innovative construction of the first reliable...
questionsmedicales.fr › Sciences de l'information › Informatique › Biologie informatique › Innovative construction of the first reliable...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Transcriptome › Innovative construction of the first reliable...
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de profil d'expression de gènes › Innovative construction of the first reliable...
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de séquence › Analyse de séquence d'ARN › Innovative construction of the first reliable...