A Jousset

Affiliations

Service de microbiologie, CHU Bicêtre, Kremlin-Bicêtre, France.

Publications (46)

Bacterial community richness shifts the balance between volatile organic compound-mediated microbe-pathogen and microbe-plant interactions.

Proceedings. Biological sciences

Avec: Waseem Raza , Jianing Wang , Alexandre Jousset , Ville-Petri Friman , Xinlan Mei , Shimei Wang , Zhong Wei , Qirong Shen

Legacy of land use history determines reprogramming of plant physiology by soil microbiome.

The ISME journal

Avec: Xiaogang Li , Alexandre Jousset , Wietse de Boer , Víctor J Carrión , Taolin Zhang , Xingxiang Wang , Eiko E Kuramae

Effect of mutation supply on population dynamics and trait evolution in an experimental microbial community.

Ecology letters

Avec: Johannes Cairns , Alexandre Jousset , Lutz Becks , Teppo Hiltunen

Introduction of probiotic bacterial consortia promotes plant growth via impacts on the resident rhizosphere microbiome.

Proceedings. Biological sciences

Avec: Jie Hu , Tianjie Yang , Ville-Petri Friman , George A Kowalchuk , Yann Hautier , Mei Li , Zhong Wei , Yangchun Xu , Qirong Shen , Alexandre Jousset

A global overview of the trophic structure within microbiomes across ecosystems.

Environment international

Avec: Wu Xiong , Alexandre Jousset , Rong Li , Manuel Delgado-Baquerizo , Mohammad Bahram , Ramiro Logares , Benjamin Wilden , Gerard Arjen de Groot , Nathalie Amacker , George A Kowalchuk , Qirong Shen , Stefan Geisen

DNA topoisomerase 1 represses HIV-1 promoter activity through its interaction with a guanine quadruplex present in the LTR sequence.

Retrovirology

Avec: María José Lista , Anne-Caroline Jousset , Mingpan Cheng , Violaine Saint-André , Elouan Perrot , Melissa Rodrigues , Carmelo Di Primo , Danielle Gadelle , Elenia Toccafondi , Emmanuel Segeral , Clarisse Berlioz-Torrent , Stéphane Emiliani , Jean-Louis Mergny , Marc Lavigne

Bacterial volatile organic compounds attenuate pathogen virulence via evolutionary trade-offs.

The ISME journal

Avec: Jianing Wang , Waseem Raza , Gaofei Jiang , Zhang Yi , Bryden Fields , Samuel Greenrod , Ville-Petri Friman , Alexandre Jousset , Qirong Shen , Zhong Wei

Feature sequence-based genome mining uncovers the hidden diversity of bacterial siderophore pathways.

eLife

Avec: Shaohua Gu , Yuanzhe Shao , Karoline Rehm , Laurent Bigler , Di Zhang , Ruolin He , Ruichen Xu , Jiqi Shao , Alexandre Jousset , Ville-Petri Friman , Xiaoying Bian , Zhong Wei , Rolf Kümmerli , Zhiyuan Li

Rhizosphere protists are key determinants of plant health.

Microbiome

Avec: Wu Xiong , Yuqi Song , Keming Yang , Yian Gu , Zhong Wei , George A Kowalchuk , Yangchun Xu , Alexandre Jousset , Qirong Shen , Stefan Geisen

Protists: Puppet Masters of the Rhizosphere Microbiome.

Trends in plant science

Avec: Zhilei Gao , Ida Karlsson , Stefan Geisen , George Kowalchuk , Alexandre Jousset

Rapid evolution of trait correlation networks during bacterial adaptation to the rhizosphere.

Evolution; international journal of organic evolution

Avec: Erqin Li , Masahiro Ryo , George A Kowalchuk , Peter A H M Bakker , Alexandre Jousset

Rapid evolution of bacterial mutualism in the plant rhizosphere.

Nature communications

Avec: Erqin Li , Ronnie de Jonge , Chen Liu , Henan Jiang , Ville-Petri Friman , Corné M J Pieterse , Peter A H M Bakker , Alexandre Jousset

Chemical and Enzymatic Probing of Viral RNAs: From Infancy to Maturity and Beyond.

Viruses

Avec: Orian Gilmer , Erwan Quignon , Anne-Caroline Jousset , Jean-Christophe Paillart , Roland Marquet , Valérie Vivet-Boudou

Five Groups in the Genus Allovahlkampfia and the Description of the New Species Vahlkampfia bulbosis n.sp.

Protist

Avec: Zhilei Gao , Alexandre Jousset , George A Kowalchuk , Stefan Geisen

Bio-Organic Fertilizer Promotes Pear Yield by Shaping the Rhizosphere Microbiome Composition and Functions.

Microbiology spectrum

Avec: Zhonghua Wang , Tianjie Yang , Xinlan Mei , Ningqi Wang , Xiaogang Li , Qingsong Yang , Caixia Dong , Gaofei Jiang , Jing Lin , Yangchun Xu , Qirong Shen , Alexandre Jousset , Samiran Banerjee

Rhizosphere shapes the associations between protistan predators and bacteria within microbiomes through the deterministic selection on bacterial communities.

Environmental microbiology

Avec: Yang Yue , Chen Liu , Boting Xu , Yijin Wang , Qihui Lv , Zeyuan Zhou , Rong Li , George A Kowalchuk , Alexandre Jousset , Qirong Shen , Wu Xiong

Pollutant profile complexity governs wastewater removal of recalcitrant pharmaceuticals.

The ISME journal

Avec: Marcel Suleiman , Natalie Le Lay , Francesca Demaria , Boris A Kolvenbach , Mariana S Cretoiu , Owen L Petchey , Alexandre Jousset , Philippe F-X Corvini

Exploring the temporal dynamics of a disease suppressive rhizo-microbiome in eggplants.

iScience

Avec: Yuling Zhang , Guiyun Gan , Yarong Li , Weiliu Li , Yaqin Jiang , Peng Wang , Jie Hu , Ningqi Wang , Xiaowen Quan , Jialin Liu , Waseem Raza , Yangchun Xu , Pierre Hohmann , Alexandre Jousset , Yikui Wang , Qirong Shen , Gaofei Jiang , Zhong Wei

Siderophore interactions drive the ability of

Horticulture research

Avec: Zhengying Shao , Shaohua Gu , Xiaoni Zhang , Jiao Xue , Tao Yan , Saisai Guo , Thomas Pommier , Alexandre Jousset , Tianjie Yang , Yangchun Xu , Qirong Shen , Zhong Wei

Emergence of new genetic lineage, ST-9316, of Neisseria meningitidis group W in Hauts-de-France region, France 2013-2018.

The Journal of infection

Avec: Ala-Eddine Deghmane , Sylvie Haeghebaert , Eva Hong , Améliane Jousset , Anne-Sophie Barret , Muhamed-Kheir Taha

Facilitation promotes invasions in plant-associated microbial communities.

Ecology letters

Avec: Mei Li , Zhong Wei , Jianing Wang , Alexandre Jousset , Ville-Petri Friman , Yangchun Xu , Qirong Shen , Thomas Pommier

Prevalence of and factors associated with post-traumatic stress disorder among French university students 1 month after the COVID-19 lockdown.

Translational psychiatry

Avec: Marielle Wathelet , Thomas Fovet , Améliane Jousset , Stéphane Duhem , Enguerrand Habran , Mathilde Horn , Christophe Debien , Charles-Edouard Notredame , Thierry Baubet , Guillaume Vaiva , Fabien D'Hondt

Extended Plant Metarhizobiome: Understanding Volatile Organic Compound Signaling in Plant-Microbe Metapopulation Networks.

mSystems

Avec: Waseem Raza , Zhong Wei , Alexandre Jousset , Qirong Shen , Ville-Petri Friman

Trophic interactions between predatory protists and pathogen-suppressive bacteria impact plant health.

The ISME journal

Avec: Sai Guo , Chengyuan Tao , Alexandre Jousset , Wu Xiong , Zhe Wang , Zongzhuan Shen , Beibei Wang , Zhihui Xu , Zhilei Gao , Shanshan Liu , Rong Li , Yunze Ruan , Qirong Shen , George A Kowalchuk , Stefan Geisen

Combining in vitro and in vivo screening to identify efficient Pseudomonas biocontrol strains against the phytopathogenic bacterium Ralstonia solanacearum.

MicrobiologyOpen

Avec: Sophie E Clough , Alexandre Jousset , John G Elphinstone , Ville-Petri Friman

Engineering multifunctional rhizosphere probiotics using consortia of

eLife

Avec: Jingxuan Li , Chunlan Yang , Alexandre Jousset , Keming Yang , Xiaofang Wang , Zhihui Xu , Tianjie Yang , Xinlan Mei , Zengtao Zhong , Yangchun Xu , Qirong Shen , Ville-Petri Friman , Zhong Wei

Foliar Spraying of Chlorpyrifos Triggers Plant Production of Linolenic Acid Recruiting Rhizosphere Bacterial

Environmental science & technology

Avec: Yong Li , Fayun Feng , Qi'er Mu , Mei Li , Liya Ma , Qun Wan , Alexandre Jousset , Changhong Liu , Xiangyang Yu

Small changes in rhizosphere microbiome composition predict disease outcomes earlier than pathogen density variations.

The ISME journal

Avec: Yian Gu , Samiran Banerjee , Francisco Dini-Andreote , Yangchun Xu , Qirong Shen , Alexandre Jousset , Zhong Wei

Initial soil microbiome composition and functioning predetermine future plant health.

Science advances

Avec: Zhong Wei , Yian Gu , Ville-Petri Friman , George A Kowalchuk , Yangchun Xu , Qirong Shen , Alexandre Jousset

Competition for iron drives phytopathogen control by natural rhizosphere microbiomes.

Nature microbiology

Avec: Shaohua Gu , Zhong Wei , Zhengying Shao , Ville-Petri Friman , Kehao Cao , Tianjie Yang , Jos Kramer , Xiaofang Wang , Mei Li , Xinlan Mei , Yangchun Xu , Qirong Shen , Rolf Kümmerli , Alexandre Jousset

Fosfomycin, from susceptibility to resistance: Impact of the new guidelines on breakpoints.

Medecine et maladies infectieuses

Avec: E Farfour , N Degand , E Riverain , V Fihman , C Le Brun , G Péan de Ponfilly , A Muggeo , A Jousset , C Piau , P Lesprit , Auteur inconnu

Targeted plant hologenome editing for plant trait enhancement.

The New phytologist

Avec: Mohammadhossein Ravanbakhsh , George A Kowalchuk , Alexandre Jousset

Phage combination therapies for bacterial wilt disease in tomato.

Nature biotechnology

Avec: Xiaofang Wang , Zhong Wei , Keming Yang , Jianing Wang , Alexandre Jousset , Yangchun Xu , Qirong Shen , Ville-Petri Friman

Diversity Manipulation of Psychrophilic Bacterial Consortia for Improved Biological Treatment of Medium-Strength Wastewater at Low Temperature.

Frontiers in microbiology

Avec: Floriana Augelletti , Alexandre Jousset , Spiros N Agathos , Benoit Stenuit

Draft Whole-Genome Sequence of the Anthracene-Degrading Strain Mycolicibacterium frederiksbergense LB501T, Isolated from a Polycyclic Aromatic Hydrocarbon-Contaminated Soil.

Microbiology resource announcements

Avec: Floriana Augelletti , Julien Tremblay , Spiros N Agathos , Alexandre Jousset , Ben Stenuit

Biocontrol Traits Correlate With Resistance to Predation by Protists in Soil Pseudomonads.

Frontiers in microbiology

Avec: Nathalie Amacker , Zhilei Gao , Betina C Agaras , Ellen Latz , George A Kowalchuk , Claudio F Valverde , Alexandre Jousset , Simone Weidner

Experimental-Evolution-Driven Identification of

mBio

Avec: Erqin Li , Hao Zhang , Henan Jiang , Corné M J Pieterse , Alexandre Jousset , Peter A H M Bakker , Ronnie de Jonge

Microbe-induced phenotypic variation leads to overyielding in clonal plant populations.

Nature ecology & evolution

Avec: Waseem Raza , Gaofei Jiang , Nico Eisenhauer , Yishuo Huang , Zhong Wei , Qirong Shen , George A Kowalchuk , Alexandre Jousset

Effects of plant tissue permeability on invasion and population bottlenecks of a phytopathogen.

Nature communications

Avec: Gaofei Jiang , Yuling Zhang , Min Chen , Josep Ramoneda , Liangliang Han , Yu Shi , Rémi Peyraud , Yikui Wang , Xiaojun Shi , Xinping Chen , Wei Ding , Alexandre Jousset , Yasufumi Hikichi , Kouhei Ohnishi , Fang-Jie Zhao , Yangchun Xu , Qirong Shen , Francisco Dini-Andreote , Yong Zhang , Zhong Wei

Divergent impacts of fertilization regimes on below-ground prokaryotic and eukaryotic communities in the Tibetan Plateau.

Journal of environmental management

Avec: Shuo Sun , Chen Liu , Yun Zhang , Yang Yue , Shiqi Sun , Yang Bai , Pengfei Zhang , Mohammadhossein Ravanbakhsh , Francisco Dini-Andreote , Rong Li , Zhenhua Zhang , Alexandre Jousset , Qirong Shen , George A Kowalchuk , Wu Xiong

Exploring the antibiotic resistance genes removal dynamics in chicken manure by composting.

Bioresource technology

Avec: Yaozhong Zhang , Ningqi Wang , Jinxing Wan , Alexandre Jousset , Gaofei Jiang , Xiaofang Wang , Zhong Wei , Yangchun Xu , Qirong Shen

Receipt of infant HIV DNA PCR test results is associated with a reduction in retention of HIV-exposed infants in integrated HIV care and healthcare services: a quantitative sub-study nested within a cluster randomised trial in rural Malawi.

BMC public health

Avec: Elasma Milanzi , Victor Mwapasa , Jessica Joseph , Aurelie Jousset , Timothy Tchereni , Andrews Gunda , Jennipher Phiri , Jeanette C Reece

Root-associated microorganisms reprogram plant life history along the growth-stress resistance tradeoff.

The ISME journal

Avec: Mohammadhossein Ravanbakhsh , George A Kowalchuk , Alexandre Jousset

Optimization of plant hormonal balance by microorganisms prevents plant heavy metal accumulation.

Journal of hazardous materials

Avec: Mohammadhossein Ravanbakhsh , George A Kowalchuk , Alexandre Jousset

Rhizosphere microbiome functional diversity and pathogen invasion resistance build up during plant development.

Environmental microbiology

Avec: Jie Hu , Zhong Wei , George A Kowalchuk , Yangchun Xu , Qirong Shen , Alexandre Jousset

Siderophore-Mediated Interactions Determine the Disease Suppressiveness of Microbial Consortia.

mSystems

Avec: Shaohua Gu , Tianjie Yang , Zhengying Shao , Tao Wang , Kehao Cao , Alexandre Jousset , Ville-Petri Friman , Cyrus Mallon , Xinlan Mei , Zhong Wei , Yangchun Xu , Qirong Shen , Thomas Pommier

Réseau de co-auteurs

Alexandre Jousset 40 collaborations

Qirong Shen 23 collaborations

Zhong Wei 19 collaborations

George A Kowalchuk 15 collaborations

Yangchun Xu 15 collaborations

Ville-Petri Friman 13 collaborations

Tianjie Yang 6 collaborations

Gaofei Jiang 6 collaborations

Waseem Raza 5 collaborations

Xinlan Mei 5 collaborations

Wu Xiong 5 collaborations

Stefan Geisen 5 collaborations

Jianing Wang 4 collaborations

Mei Li 4 collaborations

Rong Li 4 collaborations

Shaohua Gu 4 collaborations

Zhilei Gao 4 collaborations

Xiaofang Wang 4 collaborations

Mohammadhossein Ravanbakhsh 4 collaborations

Jie Hu 3 collaborations

Keming Yang 3 collaborations

Yian Gu 3 collaborations

Erqin Li 3 collaborations

Peter A H M Bakker 3 collaborations

Chen Liu 3 collaborations

Ningqi Wang 3 collaborations

Zhengying Shao 3 collaborations

Thomas Pommier 3 collaborations

Francisco Dini-Andreote 3 collaborations

Xiaogang Li 2 collaborations

Nathalie Amacker 2 collaborations

Anne-Caroline Jousset 2 collaborations

Rolf Kümmerli 2 collaborations

Ronnie de Jonge 2 collaborations

Henan Jiang 2 collaborations

Corné M J Pieterse 2 collaborations

Samiran Banerjee 2 collaborations

Yang Yue 2 collaborations

Yuling Zhang 2 collaborations

Yikui Wang 2 collaborations

Améliane Jousset 2 collaborations

Zhihui Xu 2 collaborations

Kehao Cao 2 collaborations

Floriana Augelletti 2 collaborations

Spiros N Agathos 2 collaborations

Shimei Wang 1 collaboration

Wietse de Boer 1 collaboration

Víctor J Carrión 1 collaboration

Taolin Zhang 1 collaboration

Xingxiang Wang 1 collaboration

Eiko E Kuramae 1 collaboration

Johannes Cairns 1 collaboration

Lutz Becks 1 collaboration

Teppo Hiltunen 1 collaboration

Yann Hautier 1 collaboration

Manuel Delgado-Baquerizo 1 collaboration

Mohammad Bahram 1 collaboration

Ramiro Logares 1 collaboration

Benjamin Wilden 1 collaboration

Gerard Arjen de Groot 1 collaboration

María José Lista 1 collaboration

Mingpan Cheng 1 collaboration

Violaine Saint-André 1 collaboration

Elouan Perrot 1 collaboration

Melissa Rodrigues 1 collaboration

Carmelo Di Primo 1 collaboration

Danielle Gadelle 1 collaboration

Elenia Toccafondi 1 collaboration

Emmanuel Segeral 1 collaboration

Clarisse Berlioz-Torrent 1 collaboration

Stéphane Emiliani 1 collaboration

Jean-Louis Mergny 1 collaboration

Marc Lavigne 1 collaboration

Zhang Yi 1 collaboration

Bryden Fields 1 collaboration

Samuel Greenrod 1 collaboration

Yuanzhe Shao 1 collaboration

Karoline Rehm 1 collaboration

Laurent Bigler 1 collaboration

Di Zhang 1 collaboration

Ruolin He 1 collaboration

Ruichen Xu 1 collaboration

Jiqi Shao 1 collaboration

Xiaoying Bian 1 collaboration

Zhiyuan Li 1 collaboration

Yuqi Song 1 collaboration

Ida Karlsson 1 collaboration

George Kowalchuk 1 collaboration

Masahiro Ryo 1 collaboration

Orian Gilmer 1 collaboration

Erwan Quignon 1 collaboration

Jean-Christophe Paillart 1 collaboration

Roland Marquet 1 collaboration

Valérie Vivet-Boudou 1 collaboration

Zhonghua Wang 1 collaboration

Qingsong Yang 1 collaboration

Caixia Dong 1 collaboration

Jing Lin 1 collaboration

Boting Xu 1 collaboration

Yijin Wang 1 collaboration

Qihui Lv 1 collaboration

Zeyuan Zhou 1 collaboration

Marcel Suleiman 1 collaboration

Natalie Le Lay 1 collaboration

Francesca Demaria 1 collaboration

Boris A Kolvenbach 1 collaboration

Mariana S Cretoiu 1 collaboration

Owen L Petchey 1 collaboration

Philippe F-X Corvini 1 collaboration

Guiyun Gan 1 collaboration

Yarong Li 1 collaboration

Weiliu Li 1 collaboration

Yaqin Jiang 1 collaboration

Peng Wang 1 collaboration

Xiaowen Quan 1 collaboration

Jialin Liu 1 collaboration

Pierre Hohmann 1 collaboration

Xiaoni Zhang 1 collaboration

Jiao Xue 1 collaboration

Tao Yan 1 collaboration

Saisai Guo 1 collaboration

Ala-Eddine Deghmane 1 collaboration

Sylvie Haeghebaert 1 collaboration

Eva Hong 1 collaboration

Anne-Sophie Barret 1 collaboration

Muhamed-Kheir Taha 1 collaboration

Marielle Wathelet 1 collaboration

Thomas Fovet 1 collaboration

Stéphane Duhem 1 collaboration

Enguerrand Habran 1 collaboration

Mathilde Horn 1 collaboration

Christophe Debien 1 collaboration

Charles-Edouard Notredame 1 collaboration

Thierry Baubet 1 collaboration

Guillaume Vaiva 1 collaboration

Fabien D'Hondt 1 collaboration

Sai Guo 1 collaboration

Chengyuan Tao 1 collaboration

Zhe Wang 1 collaboration

Zongzhuan Shen 1 collaboration

Beibei Wang 1 collaboration

Shanshan Liu 1 collaboration

Yunze Ruan 1 collaboration

Sophie E Clough 1 collaboration

John G Elphinstone 1 collaboration

Jingxuan Li 1 collaboration

Chunlan Yang 1 collaboration

Zengtao Zhong 1 collaboration

Yong Li 1 collaboration

Fayun Feng 1 collaboration

Qi'er Mu 1 collaboration

Liya Ma 1 collaboration

Qun Wan 1 collaboration

Changhong Liu 1 collaboration

Xiangyang Yu 1 collaboration

Jos Kramer 1 collaboration

E Farfour 1 collaboration

N Degand 1 collaboration

E Riverain 1 collaboration

V Fihman 1 collaboration

C Le Brun 1 collaboration

G Péan de Ponfilly 1 collaboration

A Muggeo 1 collaboration

C Piau 1 collaboration

P Lesprit 1 collaboration

None None 1 collaboration

Benoit Stenuit 1 collaboration

Julien Tremblay 1 collaboration

Ben Stenuit 1 collaboration

Betina C Agaras 1 collaboration

Ellen Latz 1 collaboration

Claudio F Valverde 1 collaboration

Simone Weidner 1 collaboration

Hao Zhang 1 collaboration

Nico Eisenhauer 1 collaboration

Yishuo Huang 1 collaboration

Min Chen 1 collaboration

Josep Ramoneda 1 collaboration

Liangliang Han 1 collaboration

Yu Shi 1 collaboration

Rémi Peyraud 1 collaboration

Xiaojun Shi 1 collaboration

Xinping Chen 1 collaboration

Wei Ding 1 collaboration

Yasufumi Hikichi 1 collaboration

Kouhei Ohnishi 1 collaboration

Fang-Jie Zhao 1 collaboration

Yong Zhang 1 collaboration

Shuo Sun 1 collaboration

Yun Zhang 1 collaboration

Shiqi Sun 1 collaboration

Yang Bai 1 collaboration

Pengfei Zhang 1 collaboration

Zhenhua Zhang 1 collaboration

Yaozhong Zhang 1 collaboration

Jinxing Wan 1 collaboration

Elasma Milanzi 1 collaboration

Victor Mwapasa 1 collaboration

Jessica Joseph 1 collaboration

Aurelie Jousset 1 collaboration

Timothy Tchereni 1 collaboration

Andrews Gunda 1 collaboration

Jennipher Phiri 1 collaboration

Jeanette C Reece 1 collaboration

Tao Wang 1 collaboration

Cyrus Mallon 1 collaboration