Amee R Manges

Affiliations

School of Population and Public Health, University of British Columbia, Vancouver, British Columbia, Canada.
British Columbia Centre for Disease Control (BCCDC), Vancouver, British Columbia, Canada.

Publications (27)

Brief Report: Cessation of Long-Term Cotrimoxazole Prophylaxis in HIV-Infected Children Does Not Alter the Carriage of Antimicrobial Resistance Genes.

Journal of acquired immune deficiency syndromes (1999)

Avec: Freddy Francis , Ethan K Gough , Thaddeus J Edens , Chipo Berejena , Mutsawashe Bwakura-Dangarembizi , Annie Shonhai , Kusum J Nathoo , Magdalena Glass , Diana M Gibb , Andrew J Prendergast , Amee R Manges

Strain-level analysis of gut-resident pro-inflammatory viridans group Streptococci suppressed by long-term cotrimoxazole prophylaxis among HIV-positive children in Zimbabwe.

Gut microbes

Avec: Ethan K Gough , Claire D Bourke , Chipo Berejena , Annie Shonhai , Mutsa Bwakura-Dangarembizi , Andrew J Prendergast , Amee R Manges

medRxiv : the preprint server for health sciences

Avec: Ethan K Gough , Thaddeus J Edens , Lynnea Carr , Ruairi C Robertson , Kuda Mutasa , Robert Ntozini , Bernard Chasekwa , Hyun Min Geum , Iman Baharmand , Sandeep K Gill , Batsirai Mutasa , Mduduzi N N Mbuya , Florence D Majo , Naume Tavengwa , Freddy Francis , Joice Tome , Ceri Evans , Margaret Kosek , Jean H Humphrey , Andrew J Prendergast , Amee R Manges , Auteur inconnu

Can breastfeeding protect against antimicrobial resistance?

BMC medicine

Avec: Maya L Nadimpalli , Claire D Bourke , Ruairi C Robertson , Elisabeth Delarocque-Astagneau , Amee R Manges , Amy J Pickering

Antibiotic use and resistance in children with severe acute malnutrition and human immunodeficiency virus infection.

International journal of antimicrobial agents

Avec: Freddy Francis , Ruairi C Robertson , Mutsawashe Bwakura-Dangarembizi , Andrew J Prendergast , Amee R Manges

Treatment of HCV with direct-acting antivirals on reducing mortality related to extrahepatic manifestations: a large population-based study in British Columbia, Canada.

Lancet regional health. Americas

Avec: Dahn Jeong , Stanley Wong , Mohammad Ehsanul Karim , Amee R Manges , Jean Damascene Makuza , Sofia R Bartlett , Héctor Alexander Velásquez García , Daryl Luster , Prince Asumadu Adu , Mawuena Binka , Amanda Yu , Mel Krajden , Naveed Zafar Janjua

The Human Microbiome and Child Growth - First 1000 Days and Beyond.

Trends in microbiology

Avec: Ruairi C Robertson , Amee R Manges , B Brett Finlay , Andrew J Prendergast

Optimization of magnetic bead-based nucleic acid extraction for SARS-CoV-2 testing using readily available reagents.

Journal of virological methods

Avec: Simon Haile , Aidan M Nikiforuk , Pawan K Pandoh , David D W Twa , Duane E Smailus , Jason Nguyen , Stephen Pleasance , Angus Wong , Yongjun Zhao , Diane Eisler , Michelle Moksa , Qi Cao , Marcus Wong , Edmund Su , Martin Krzywinski , Jessica Nelson , Andrew J Mungall , Frankie Tsang , Leah M Prentice , Agatha Jassem , Amee R Manges , Steven J M Jones , Robin J Coope , Natalie Prystajecky , Marco A Marra , Mel Krajden , Martin Hirst

SinoNasal Microbiota Transfer to treat recalcitrant chronic rhinosinusitis: A case series.

International forum of allergy & rhinology

Avec: Sandeep K Gill , Juan C Hernaiz-Leonardo , Thaddeus J Edens , Athenea Pascual , Chris Tang , Judy Fan , Andrew Thamboo , Warren Mullings , Saad Alsaleh , Bader M Alim , Amin R Javer , Amee R Manges

Genomic Epidemiology of Major Extraintestinal Pathogenic

Open forum infectious diseases

Avec: Chad D Fibke , Matthew A Croxen , Hyun Min Geum , Magdalena Glass , Eugenia Wong , Brent P Avery , Danielle Daignault , Michael R Mulvey , Richard J Reid-Smith , E Jane Parmley , Andrea Portt , Patrick Boerlin , Amee R Manges

Nanopore metagenomic sequencing for detection and characterization of SARS-CoV-2 in clinical samples.

PloS one

Avec: Nick P G Gauthier , Cassidy Nelson , Michael B Bonsall , Kerstin Locher , Marthe Charles , Clayton MacDonald , Mel Krajden , Samuel D Chorlton , Amee R Manges

Maternal fecal microbiome predicts gestational age, birth weight and neonatal growth in rural Zimbabwe.

EBioMedicine

Avec: Ethan K Gough , Thaddeus J Edens , Hyun Min Geum , Iman Baharmand , Sandeep K Gill , Ruairi C Robertson , Kuda Mutasa , Robert Ntozini , Laura E Smith , Bernard Chasekwa , Florence D Majo , Naume V Tavengwa , Batsirai Mutasa , Freddy Francis , Lynnea Carr , Joice Tome , Rebecca J Stoltzfus , Lawrence H Moulton , Andrew J Prendergast , Jean H Humphrey , Amee R Manges , Shine Trial Team

BugSplit enables genome-resolved metagenomics through highly accurate taxonomic binning of metagenomic assemblies.

Communications biology

Avec: Induja Chandrakumar , Nick P G Gauthier , Cassidy Nelson , Michael B Bonsall , Kerstin Locher , Marthe Charles , Clayton MacDonald , Mel Krajden , Amee R Manges , Samuel D Chorlton

Deficient butyrate metabolism in the intestinal microbiome is a potential risk factor for recurrent kidney stone disease.

Urolithiasis

Avec: Wai Ho Choy , Ava Adler , Connor Morgan-Lang , Ethan K Gough , Steven J Hallam , Amee R Manges , Ben H Chew , Kristina Penniston , Aaron Miller , Dirk Lange

Alterations in the nasopharyngeal microbiome associated with SARS-CoV-2 infection status and disease severity.

PloS one

Avec: Nick P G Gauthier , Kerstin Locher , Clayton MacDonald , Samuel D Chorlton , Marthe Charles , Amee R Manges

Maternal vaginal microbiome composition does not affect development of the infant gut microbiome in early life.

Frontiers in cellular and infection microbiology

Avec: Scott J Dos Santos , Zahra Pakzad , Arianne Y K Albert , Chelsea N Elwood , Kirsten Grabowska , Matthew G Links , Jennifer A Hutcheon , Evelyn J Maan , Amee R Manges , Tim J Dumonceaux , Zoë G Hodgson , Janet Lyons , Sheona M Mitchell-Foster , Soren Gantt , K S Joseph , Julie E Van Schalkwyk , Janet E Hill , Deborah M Money

Health Outcomes, Pathogenesis and Epidemiology of Severe Acute Malnutrition (HOPE-SAM): rationale and methods of a longitudinal observational study.

BMJ open

Avec: Mutsa Bwakura-Dangarembizi , Beatrice Amadi , Claire D Bourke , Ruairi C Robertson , Benjamin Mwapenya , Kanta Chandwe , Chanda Kapoma , Kapula Chifunda , Florence Majo , Deophine Ngosa , Pamela Chakara , Nivea Chulu , Faithfull Masimba , Idah Mapurisa , Ellen Besa , Kuda Mutasa , Simutanyi Mwakamui , Thompson Runodamoto , Jean H Humphrey , Robert Ntozini , Jonathan C K Wells , Amee R Manges , Jonathan R Swann , A Sarah Walker , Kusum J Nathoo , Paul Kelly , Andrew J Prendergast , Auteur inconnu

Cotrimoxazole reduces systemic inflammation in HIV infection by altering the gut microbiome and immune activation.

Science translational medicine

Avec: Claire D Bourke , Ethan K Gough , Godfrey Pimundu , Annie Shonhai , Chipo Berejena , Louise Terry , Lucas Baumard , Naheed Choudhry , Yusuf Karmali , Mutsa Bwakura-Dangarembizi , Victor Musiime , Joseph Lutaakome , Adeodata Kekitiinwa , Kuda Mutasa , Alexander J Szubert , Moira J Spyer , Jane R Deayton , Magdalena Glass , Hyun Min Geum , Claire Pardieu , Diana M Gibb , Nigel Klein , Thaddeus J Edens , A Sarah Walker , Amee R Manges , Andrew J Prendergast

Independent and combined effects of improved water, sanitation, and hygiene, and improved complementary feeding, on child stunting and anaemia in rural Zimbabwe: a cluster-randomised trial.

The Lancet. Global health

Avec: Jean H Humphrey , Mduduzi N N Mbuya , Robert Ntozini , Lawrence H Moulton , Rebecca J Stoltzfus , Naume V Tavengwa , Kuda Mutasa , Florence Majo , Batsirai Mutasa , Goldberg Mangwadu , Cynthia M Chasokela , Ancikaria Chigumira , Bernard Chasekwa , Laura E Smith , James M Tielsch , Andrew D Jones , Amee R Manges , John A Maluccio , Andrew J Prendergast , Auteur inconnu

The fecal microbiome and rotavirus vaccine immunogenicity in rural Zimbabwean infants.

Vaccine

Avec: Ruairi C Robertson , James A Church , Thaddeus J Edens , Kuda Mutasa , Hyun Min Geum , Iman Baharmand , Sandeep K Gill , Robert Ntozini , Bernard Chasekwa , Lynnea Carr , Florence D Majo , Beth D Kirkpatrick , Benjamin Lee , Lawrence H Moulton , Jean H Humphrey , Andrew J Prendergast , Amee R Manges , Auteur inconnu

Global Extraintestinal Pathogenic Escherichia coli (ExPEC) Lineages.

Clinical microbiology reviews

Avec: Amee R Manges , Hyun Min Geum , Alice Guo , Thaddeus J Edens , Chad D Fibke , Johann D D Pitout

Virulence Genotype and Phenotype of Multiple Antimicrobial-Resistant Escherichia coli Isolates from Broilers Assessed from a "One-Health" Perspective.

Journal of food protection

Avec: Muhammad Attiq Rehman , Heidi Rempel , Catherine D Carrillo , Kim Ziebell , Kevin Allen , Amee R Manges , Edward Topp , Moussa S Diarra

Early Neonatal Meconium Does Not Have a Demonstrable Microbiota Determined through Use of Robust Negative Controls with

Microbiology spectrum

Avec: Scott J Dos Santos , Zahra Pakzad , Chelsea N Elwood , Arianne Y K Albert , Soren Gantt , Amee R Manges , Tim J Dumonceaux , Evelyn J Maan , Janet E Hill , Deborah M Money , Auteur inconnu

The gut microbiome and early-life growth in a population with high prevalence of stunting.

Nature communications

Avec: Ruairi C Robertson , Thaddeus J Edens , Lynnea Carr , Kuda Mutasa , Ethan K Gough , Ceri Evans , Hyun Min Geum , Iman Baharmand , Sandeep K Gill , Robert Ntozini , Laura E Smith , Bernard Chasekwa , Florence D Majo , Naume V Tavengwa , Batsirai Mutasa , Freddy Francis , Joice Tome , Rebecca J Stoltzfus , Jean H Humphrey , Andrew J Prendergast , Amee R Manges

Agnostic Sequencing for Detection of Viral Pathogens.

Clinical microbiology reviews

Avec: Nick P G Gauthier , Samuel D Chorlton , Mel Krajden , Amee R Manges

Validation of an automated, end-to-end metagenomic sequencing assay for agnostic detection of respiratory viruses.

The Journal of infectious diseases

Avec: Nick P G Gauthier , Wilson Chan , Kerstin Locher , Duane Smailus , Robin Coope , Marthe Charles , Agatha Jassem , Jennifer Kopetzky , Samuel D Chorlton , Amee R Manges

Bifidobacterium longum and microbiome maturation modify a nutrient intervention for stunting in Zimbabwean infants.

EBioMedicine

Avec: Ethan K Gough , Thaddeus J Edens , Lynnea Carr , Ruairi C Robertson , Kuda Mutasa , Robert Ntozini , Bernard Chasekwa , Hyun Min Geum , Iman Baharmand , Sandeep K Gill , Batsirai Mutasa , Mduduzi N N Mbuya , Florence D Majo , Naume Tavengwa , Freddy Francis , Joice Tome , Ceri Evans , Margaret Kosek , Andrew J Prendergast , Amee R Manges , Auteur inconnu

Réseau de co-auteurs

Andrew J Prendergast 12 collaborations

Thaddeus J Edens 9 collaborations

Ruairi C Robertson 9 collaborations

Ethan K Gough 8 collaborations

Kuda Mutasa 8 collaborations

Hyun Min Geum 8 collaborations

Robert Ntozini 7 collaborations

Freddy Francis 6 collaborations

Bernard Chasekwa 6 collaborations

Sandeep K Gill 6 collaborations

Jean H Humphrey 6 collaborations

None None 6 collaborations

Lynnea Carr 5 collaborations

Iman Baharmand 5 collaborations

Batsirai Mutasa 5 collaborations

Florence D Majo 5 collaborations

Mel Krajden 5 collaborations

Nick P G Gauthier 5 collaborations

Samuel D Chorlton 5 collaborations

Claire D Bourke 4 collaborations

Joice Tome 4 collaborations

Kerstin Locher 4 collaborations

Marthe Charles 4 collaborations

Chipo Berejena 3 collaborations

Annie Shonhai 3 collaborations

Magdalena Glass 3 collaborations

Mutsa Bwakura-Dangarembizi 3 collaborations

Mduduzi N N Mbuya 3 collaborations

Ceri Evans 3 collaborations

Clayton MacDonald 3 collaborations

Laura E Smith 3 collaborations

Naume V Tavengwa 3 collaborations

Rebecca J Stoltzfus 3 collaborations

Lawrence H Moulton 3 collaborations

Mutsawashe Bwakura-Dangarembizi 2 collaborations

Kusum J Nathoo 2 collaborations

Diana M Gibb 2 collaborations

Naume Tavengwa 2 collaborations

Margaret Kosek 2 collaborations

Agatha Jassem 2 collaborations

Chad D Fibke 2 collaborations

Cassidy Nelson 2 collaborations

Michael B Bonsall 2 collaborations

Scott J Dos Santos 2 collaborations

Zahra Pakzad 2 collaborations

Arianne Y K Albert 2 collaborations

Chelsea N Elwood 2 collaborations

Evelyn J Maan 2 collaborations

Tim J Dumonceaux 2 collaborations

Soren Gantt 2 collaborations

Janet E Hill 2 collaborations

Deborah M Money 2 collaborations

Florence Majo 2 collaborations

A Sarah Walker 2 collaborations

Maya L Nadimpalli 1 collaboration

Elisabeth Delarocque-Astagneau 1 collaboration

Amy J Pickering 1 collaboration

Dahn Jeong 1 collaboration

Stanley Wong 1 collaboration

Mohammad Ehsanul Karim 1 collaboration

Jean Damascene Makuza 1 collaboration

Sofia R Bartlett 1 collaboration

Héctor Alexander Velásquez García 1 collaboration

Daryl Luster 1 collaboration

Prince Asumadu Adu 1 collaboration

Mawuena Binka 1 collaboration

Amanda Yu 1 collaboration

Naveed Zafar Janjua 1 collaboration

B Brett Finlay 1 collaboration

Simon Haile 1 collaboration

Aidan M Nikiforuk 1 collaboration

Pawan K Pandoh 1 collaboration

David D W Twa 1 collaboration

Duane E Smailus 1 collaboration

Jason Nguyen 1 collaboration

Stephen Pleasance 1 collaboration

Angus Wong 1 collaboration

Yongjun Zhao 1 collaboration

Diane Eisler 1 collaboration

Michelle Moksa 1 collaboration

Qi Cao 1 collaboration

Marcus Wong 1 collaboration

Edmund Su 1 collaboration

Martin Krzywinski 1 collaboration

Jessica Nelson 1 collaboration

Andrew J Mungall 1 collaboration

Frankie Tsang 1 collaboration

Leah M Prentice 1 collaboration

Steven J M Jones 1 collaboration

Robin J Coope 1 collaboration

Natalie Prystajecky 1 collaboration

Marco A Marra 1 collaboration

Martin Hirst 1 collaboration

Juan C Hernaiz-Leonardo 1 collaboration

Athenea Pascual 1 collaboration

Chris Tang 1 collaboration

Judy Fan 1 collaboration

Andrew Thamboo 1 collaboration

Warren Mullings 1 collaboration

Saad Alsaleh 1 collaboration

Bader M Alim 1 collaboration

Amin R Javer 1 collaboration

Matthew A Croxen 1 collaboration

Eugenia Wong 1 collaboration

Brent P Avery 1 collaboration

Danielle Daignault 1 collaboration

Michael R Mulvey 1 collaboration

Richard J Reid-Smith 1 collaboration

E Jane Parmley 1 collaboration

Andrea Portt 1 collaboration

Patrick Boerlin 1 collaboration

Shine Trial Team 1 collaboration

Induja Chandrakumar 1 collaboration

Wai Ho Choy 1 collaboration

Ava Adler 1 collaboration

Connor Morgan-Lang 1 collaboration

Steven J Hallam 1 collaboration

Ben H Chew 1 collaboration

Kristina Penniston 1 collaboration

Aaron Miller 1 collaboration

Dirk Lange 1 collaboration

Kirsten Grabowska 1 collaboration

Matthew G Links 1 collaboration

Jennifer A Hutcheon 1 collaboration

Zoë G Hodgson 1 collaboration

Janet Lyons 1 collaboration

Sheona M Mitchell-Foster 1 collaboration

K S Joseph 1 collaboration

Julie E Van Schalkwyk 1 collaboration

Beatrice Amadi 1 collaboration

Benjamin Mwapenya 1 collaboration

Kanta Chandwe 1 collaboration

Chanda Kapoma 1 collaboration

Kapula Chifunda 1 collaboration

Deophine Ngosa 1 collaboration

Pamela Chakara 1 collaboration

Nivea Chulu 1 collaboration

Faithfull Masimba 1 collaboration

Idah Mapurisa 1 collaboration

Ellen Besa 1 collaboration

Simutanyi Mwakamui 1 collaboration

Thompson Runodamoto 1 collaboration

Jonathan C K Wells 1 collaboration

Jonathan R Swann 1 collaboration

Paul Kelly 1 collaboration

Godfrey Pimundu 1 collaboration

Louise Terry 1 collaboration

Lucas Baumard 1 collaboration

Naheed Choudhry 1 collaboration

Yusuf Karmali 1 collaboration

Victor Musiime 1 collaboration

Joseph Lutaakome 1 collaboration

Adeodata Kekitiinwa 1 collaboration

Alexander J Szubert 1 collaboration

Moira J Spyer 1 collaboration

Jane R Deayton 1 collaboration

Claire Pardieu 1 collaboration

Nigel Klein 1 collaboration

Goldberg Mangwadu 1 collaboration

Cynthia M Chasokela 1 collaboration

Ancikaria Chigumira 1 collaboration

James M Tielsch 1 collaboration

Andrew D Jones 1 collaboration

John A Maluccio 1 collaboration

James A Church 1 collaboration

Beth D Kirkpatrick 1 collaboration

Benjamin Lee 1 collaboration

Alice Guo 1 collaboration

Johann D D Pitout 1 collaboration

Muhammad Attiq Rehman 1 collaboration

Heidi Rempel 1 collaboration

Catherine D Carrillo 1 collaboration

Kim Ziebell 1 collaboration

Kevin Allen 1 collaboration

Edward Topp 1 collaboration

Moussa S Diarra 1 collaboration

Wilson Chan 1 collaboration

Duane Smailus 1 collaboration

Robin Coope 1 collaboration

Jennifer Kopetzky 1 collaboration