Samouil L Farhi

Affiliations
  • Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA.

Publications (14)

COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets.

Nature
Avec: Toni M Delorey , Carly G K Ziegler , Graham Heimberg , Rachelly Normand , Yiming Yang , Åsa Segerstolpe , Domenic Abbondanza , Stephen J Fleming , Ayshwarya Subramanian , Daniel T Montoro , Karthik A Jagadeesh , Kushal K Dey , Pritha Sen , Michal Slyper , Yered H Pita-Juárez , Devan Phillips , Jana Biermann , Zohar Bloom-Ackermann , Nikolaos Barkas , Andrea Ganna , James Gomez , Johannes C Melms , Igor Katsyv , Erica Normandin , Pourya Naderi , Yury V Popov , Siddharth S Raju , Sebastian Niezen , Linus T-Y Tsai , Katherine J Siddle , Malika Sud , Victoria M Tran , Shamsudheen K Vellarikkal , Yiping Wang , Liat Amir-Zilberstein , Deepak S Atri , Joseph Beechem , Olga R Brook , Jonathan Chen , Prajan Divakar , Phylicia Dorceus , Jesse M Engreitz , Adam Essene , Donna M Fitzgerald , Robin Fropf , Steven Gazal , Joshua Gould , John Grzyb , Tyler Harvey , Jonathan Hecht , Tyler Hether , Judit Jané-Valbuena , Michael Leney-Greene , Hui Ma , Cristin McCabe , Daniel E McLoughlin , Eric M Miller , Christoph Muus , Mari Niemi , Robert Padera , Liuliu Pan , Deepti Pant , Carmel Pe'er , Jenna Pfiffner-Borges , Christopher J Pinto , Jacob Plaisted , Jason Reeves , Marty Ross , Melissa Rudy , Erroll H Rueckert , Michelle Siciliano , Alexander Sturm , Ellen Todres , Avinash Waghray , Sarah Warren , Shuting Zhang , Daniel R Zollinger , Lisa Cosimi , Rajat M Gupta , Nir Hacohen , Hanina Hibshoosh , Winston Hide , Alkes L Price , Jayaraj Rajagopal , Purushothama Rao Tata , Stefan Riedel , Gyongyi Szabo , Timothy L Tickle , Patrick T Ellinor , Deborah Hung , Pardis C Sabeti , Richard Novak , Robert Rogers , Donald E Ingber , Z Gordon Jiang , Dejan Juric , Mehrtash Babadi , Samouil L Farhi , Benjamin Izar , James R Stone , Ioannis S Vlachos , Isaac H Solomon , Orr Ashenberg , Caroline B M Porter , Bo Li , Alex K Shalek , Alexandra-Chloé Villani , Orit Rozenblatt-Rosen , Aviv Regev

A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2.

bioRxiv : the preprint server for biology
Avec: Toni M Delorey , Carly G K Ziegler , Graham Heimberg , Rachelly Normand , Yiming Yang , Asa Segerstolpe , Domenic Abbondanza , Stephen J Fleming , Ayshwarya Subramanian , Daniel T Montoro , Karthik A Jagadeesh , Kushal K Dey , Pritha Sen , Michal Slyper , Yered H Pita-Juárez , Devan Phillips , Zohar Bloom-Ackerman , Nick Barkas , Andrea Ganna , James Gomez , Erica Normandin , Pourya Naderi , Yury V Popov , Siddharth S Raju , Sebastian Niezen , Linus T-Y Tsai , Katherine J Siddle , Malika Sud , Victoria M Tran , Shamsudheen K Vellarikkal , Liat Amir-Zilberstein , Deepak S Atri , Joseph Beechem , Olga R Brook , Jonathan Chen , Prajan Divakar , Phylicia Dorceus , Jesse M Engreitz , Adam Essene , Donna M Fitzgerald , Robin Fropf , Steven Gazal , Joshua Gould , John Grzyb , Tyler Harvey , Jonathan Hecht , Tyler Hether , Judit Jane-Valbuena , Michael Leney-Greene , Hui Ma , Cristin McCabe , Daniel E McLoughlin , Eric M Miller , Christoph Muus , Mari Niemi , Robert Padera , Liuliu Pan , Deepti Pant , Carmel Pe'er , Jenna Pfiffner-Borges , Christopher J Pinto , Jacob Plaisted , Jason Reeves , Marty Ross , Melissa Rudy , Erroll H Rueckert , Michelle Siciliano , Alexander Sturm , Ellen Todres , Avinash Waghray , Sarah Warren , Shuting Zhang , Daniel R Zollinger , Lisa Cosimi , Rajat M Gupta , Nir Hacohen , Winston Hide , Alkes L Price , Jayaraj Rajagopal , Purushothama Rao Tata , Stefan Riedel , Gyongyi Szabo , Timothy L Tickle , Deborah Hung , Pardis C Sabeti , Richard Novak , Robert Rogers , Donald E Ingber , Z Gordon Jiang , Dejan Juric , Mehrtash Babadi , Samouil L Farhi , James R Stone , Ioannis S Vlachos , Isaac H Solomon , Orr Ashenberg , Caroline B M Porter , Bo Li , Alex K Shalek , Alexandra-Chloé Villani , Orit Rozenblatt-Rosen , Aviv Regev

Réseau de co-auteurs

Domenic Abbondanza 5 collaborations
Aviv Regev 4 collaborations
Loïc Binan 4 collaborations
Stephen J Fleming 3 collaborations
Karthik A Jagadeesh 3 collaborations
Devan Phillips 3 collaborations
Prajan Divakar 3 collaborations
Robin Fropf 3 collaborations
Joshua Gould 3 collaborations
Daniel R Zollinger 3 collaborations
Mehrtash Babadi 3 collaborations
Orr Ashenberg 3 collaborations
Caroline B M Porter 3 collaborations
Alex K Shalek 3 collaborations
Orit Rozenblatt-Rosen 3 collaborations
Toni M Delorey 2 collaborations
Carly G K Ziegler 2 collaborations
Graham Heimberg 2 collaborations
Rachelly Normand 2 collaborations
Yiming Yang 2 collaborations
Ayshwarya Subramanian 2 collaborations
Daniel T Montoro 2 collaborations
Kushal K Dey 2 collaborations
Pritha Sen 2 collaborations
Michal Slyper 2 collaborations
Yered H Pita-Juárez 2 collaborations
Andrea Ganna 2 collaborations
James Gomez 2 collaborations
Erica Normandin 2 collaborations
Pourya Naderi 2 collaborations
Yury V Popov 2 collaborations
Siddharth S Raju 2 collaborations
Sebastian Niezen 2 collaborations
Linus T-Y Tsai 2 collaborations
Katherine J Siddle 2 collaborations
Malika Sud 2 collaborations
Victoria M Tran 2 collaborations
Liat Amir-Zilberstein 2 collaborations
Deepak S Atri 2 collaborations
Joseph Beechem 2 collaborations
Olga R Brook 2 collaborations
Jonathan Chen 2 collaborations
Phylicia Dorceus 2 collaborations
Jesse M Engreitz 2 collaborations
Adam Essene 2 collaborations
Donna M Fitzgerald 2 collaborations
Steven Gazal 2 collaborations
John Grzyb 2 collaborations
Tyler Harvey 2 collaborations
Jonathan Hecht 2 collaborations
Tyler Hether 2 collaborations
Michael Leney-Greene 2 collaborations
Hui Ma 2 collaborations
Cristin McCabe 2 collaborations
Daniel E McLoughlin 2 collaborations
Eric M Miller 2 collaborations
Christoph Muus 2 collaborations
Mari Niemi 2 collaborations
Robert Padera 2 collaborations
Liuliu Pan 2 collaborations
Deepti Pant 2 collaborations
Carmel Pe'er 2 collaborations
Jenna Pfiffner-Borges 2 collaborations
Christopher J Pinto 2 collaborations
Jacob Plaisted 2 collaborations
Jason Reeves 2 collaborations
Marty Ross 2 collaborations
Melissa Rudy 2 collaborations
Erroll H Rueckert 2 collaborations
Michelle Siciliano 2 collaborations
Alexander Sturm 2 collaborations
Ellen Todres 2 collaborations
Avinash Waghray 2 collaborations
Sarah Warren 2 collaborations
Shuting Zhang 2 collaborations
Lisa Cosimi 2 collaborations
Rajat M Gupta 2 collaborations
Nir Hacohen 2 collaborations
Winston Hide 2 collaborations
Alkes L Price 2 collaborations
Jayaraj Rajagopal 2 collaborations
Purushothama Rao Tata 2 collaborations
Stefan Riedel 2 collaborations
Gyongyi Szabo 2 collaborations
Timothy L Tickle 2 collaborations
Deborah Hung 2 collaborations
Pardis C Sabeti 2 collaborations
Richard Novak 2 collaborations
Robert Rogers 2 collaborations
Donald E Ingber 2 collaborations
Z Gordon Jiang 2 collaborations
Dejan Juric 2 collaborations
James R Stone 2 collaborations
Ioannis S Vlachos 2 collaborations
Isaac H Solomon 2 collaborations
Bo Li 2 collaborations
Yoav Adam 2 collaborations
Shan Lou 2 collaborations
Robert E Campbell 2 collaborations
Adam E Cohen 2 collaborations
Ruixu Huang 2 collaborations
Cai McCann 2 collaborations
Jack Nelson 2 collaborations
John P Bryan 2 collaborations
Brian Cleary 2 collaborations
Brittany A Goods 2 collaborations
Ethan Crouse 2 collaborations
Vera Valakh 2 collaborations
Ralda Nehme 2 collaborations
Paola Arlotta 2 collaborations
Donna S Neuberg 2 collaborations
Denis Schapiro 2 collaborations
Åsa Segerstolpe 1 collaboration
Jana Biermann 1 collaboration
Zohar Bloom-Ackermann 1 collaboration
Nikolaos Barkas 1 collaboration
Johannes C Melms 1 collaboration
Igor Katsyv 1 collaboration
Yiping Wang 1 collaboration
Judit Jané-Valbuena 1 collaboration
Hanina Hibshoosh 1 collaboration
Patrick T Ellinor 1 collaboration
Benjamin Izar 1 collaboration
Asa Segerstolpe 1 collaboration
Zohar Bloom-Ackerman 1 collaboration
Nick Barkas 1 collaboration
Judit Jane-Valbuena 1 collaboration
Vicente J Parot 1 collaboration
Abhinav Grama 1 collaboration
Masahito Yamagata 1 collaboration
Ahmed S Abdelfattah 1 collaboration
Jeong Jun Kim 1 collaboration
David D Cox 1 collaboration
Jeffrey Pea 1 collaboration
Luhan Tracy Zhou 1 collaboration
Daniela D Russo 1 collaboration
Emily J Zaniker 1 collaboration
Achla H Gandhi 1 collaboration
Francesca E Duncan 1 collaboration
Brice Wang 1 collaboration
Tianle Ma 1 collaboration
Theresa Chen 1 collaboration
Trinh Nguyen 1 collaboration
Alison S Walker 1 collaboration
Evan W Miller 1 collaboration
Jeffrey A Stogsdill 1 collaboration
Kwanho Kim 1 collaboration
Joshua Z Levin 1 collaboration
Jeong J Kim 1 collaboration
Yongxin Zhao 1 collaboration
Michael E Xie 1 collaboration
Daan Brinks 1 collaboration
Hao Wu 1 collaboration
Simon Kheifets 1 collaboration
Vicente Parot 1 collaboration
Selmaan Chettih 1 collaboration
Katherine J Williams 1 collaboration
Benjamin Gmeiner 1 collaboration
Linda Madisen 1 collaboration
E Kelly Buchanan 1 collaboration
Ian Kinsella 1 collaboration
Ding Zhou 1 collaboration
Liam Paninski 1 collaboration
Christopher D Harvey 1 collaboration
Hongkui Zeng 1 collaboration
Huan Wang 1 collaboration
Ce Gao 1 collaboration
Miles Trans 1 collaboration
Anna Yeaton 1 collaboration
Kristen Felt 1 collaboration
Kathleen L Pfaff 1 collaboration
Teri Bowman 1 collaboration
Scott J Rodig 1 collaboration
Kevin Wei 1 collaboration
Katie Maurer 1 collaboration
Cameron Y Park 1 collaboration
Shouvik Mani 1 collaboration
Mehdi Borji 1 collaboration
Livius Penter 1 collaboration
Yinuo Jin 1 collaboration
Jia Yi Zhang 1 collaboration
Crystal Shin 1 collaboration
James R Brenner 1 collaboration
Jackson Southard 1 collaboration
Sachi Krishna 1 collaboration
Wesley Lu 1 collaboration
Haoxiang Lyu 1 collaboration
Chanell Mangum 1 collaboration
Lars Rønn Olsen 1 collaboration
Pavan Bachireddy 1 collaboration
Shuqiang Li 1 collaboration
Kenneth J Livak 1 collaboration
Jerome Ritz 1 collaboration
Robert J Soiffer 1 collaboration
Catherine J Wu 1 collaboration
Elham Azizi 1 collaboration
Artem Sokolov 1 collaboration
Clarence Yapp 1 collaboration
Yu-An Chen 1 collaboration
Jeremy L Muhlich 1 collaboration
Joshua Hess 1 collaboration
Allison L Creason 1 collaboration
Ajit J Nirmal 1 collaboration
Gregory J Baker 1 collaboration
Maulik K Nariya 1 collaboration
Jia-Ren Lin 1 collaboration
Zoltan Maliga 1 collaboration
Connor A Jacobson 1 collaboration
Matthew W Hodgman 1 collaboration
Juha Ruokonen 1 collaboration
Eliot T McKinley 1 collaboration
Daniel Persson 1 collaboration
Courtney Betts 1 collaboration
Shamilene Sivagnanam 1 collaboration
Jeremy Goecks 1 collaboration
Robert J Coffey 1 collaboration
Lisa M Coussens 1 collaboration
Sandro Santagata 1 collaboration
Peter K Sorger 1 collaboration
Emilia Favuzzi 1 collaboration
Shuhan Huang 1 collaboration
Giuseppe A Saldi 1 collaboration
Leena A Ibrahim 1 collaboration
Yuqing Cao 1 collaboration
Ayman Zeine 1 collaboration
Adwoa Sefah 1 collaboration
Karen Zheng 1 collaboration
Qing Xu 1 collaboration
Elizaveta Khlestova 1 collaboration
Richard Bonneau 1 collaboration
Sandeep Robert Datta 1 collaboration
Beth Stevens 1 collaboration
Gord Fishell 1 collaboration
William L Hwang 1 collaboration
Jimmy A Guo 1 collaboration
Hannah I Hoffman 1 collaboration
Payman Yadollahpour 1 collaboration
Jason W Reeves 1 collaboration
Rahul Mohan 1 collaboration
Eugene Drokhlyansky 1 collaboration
Eric Miller 1 collaboration
George Eng 1 collaboration
Jason M Schenkel 1 collaboration
Jennifer Su 1 collaboration
Carina Shiau 1 collaboration
Patrick Yu 1 collaboration
William A Freed-Pastor 1 collaboration
Arnav Mehta 1 collaboration
Conner Lambden 1 collaboration
Alexander Tsankov 1 collaboration
Danielle Dionne 1 collaboration
Julia Waldman 1 collaboration
Michael S Cuoco 1 collaboration
Lan Nguyen 1 collaboration
Toni Delorey 1 collaboration
Jaimie L Barth 1 collaboration
Marina Kem 1 collaboration
Clifton Rodrigues 1 collaboration
Debora Ciprani 1 collaboration
Jorge Roldan 1 collaboration
Piotr Zelga 1 collaboration
Vjola Jorgji 1 collaboration
Jonathan H Chen 1 collaboration
Zackery Ely 1 collaboration
Daniel Zhao 1 collaboration
Kit Fuhrman 1 collaboration
Joseph M Beechem 1 collaboration
Jay S Loeffler 1 collaboration
David P Ryan 1 collaboration
Colin D Weekes 1 collaboration
Cristina R Ferrone 1 collaboration
Motaz Qadan 1 collaboration
Martin J Aryee 1 collaboration
Rakesh K Jain 1 collaboration
Jennifer Y Wo 1 collaboration
Theodore S Hong 1 collaboration
Ramnik Xavier 1 collaboration
Andrew J Aguirre 1 collaboration
Mari Mino-Kenudson 1 collaboration
Andrew S Liss 1 collaboration
David T Ting 1 collaboration
Tyler Jacks 1 collaboration
Yonina C Eldar 1 collaboration
Martin H Berryer 1 collaboration
Matthew Tegtmeyer 1 collaboration
Anna Nathanson 1 collaboration
Darina Trendafilova 1 collaboration
Jenny A Klein 1 collaboration
Daniel Meyer 1 collaboration
Olli Pietiläinen 1 collaboration
Francesca Rapino 1 collaboration
Lee L Rubin 1 collaboration
Steven A McCarroll 1 collaboration
Lindy E Barrett 1 collaboration