Stefano Amente

Affiliations

Department of Molecular Medicine and Medical Biotechnologies, University of Naples "Federico II", Naples, Italy.

Publications (19)

A novel workflow for the qualitative analysis of DNA methylation data.

Computational and structural biotechnology journal

Avec: Antonella Sarnataro , Giulia De Riso , Sergio Cocozza , Antonio Pezone , Barbara Majello , Stefano Amente , Giovanni Scala

Inhibition of lysine-specific demethylase LSD1 induces senescence in Glioblastoma cells through a HIF-1α-dependent pathway.

Biochimica et biophysica acta. Gene regulatory mechanisms

Avec: Carmen D Saccà , Francesca Gorini , Susanna Ambrosio , Stefano Amente , Deriggio Faicchia , Giuseppe Matarese , Luigi Lania , Barbara Majello

Blastic plasmacytoid dendritic cell neoplasm: genomics mark epigenetic dysregulation as a primary therapeutic target.

Haematologica

Avec: Maria Rosaria Sapienza , Francesco Abate , Federica Melle , Stefania Orecchioni , Fabio Fuligni , Maryam Etebari , Valentina Tabanelli , Maria Antonella Laginestra , Alessandro Pileri , Giovanna Motta , Maura Rossi , Claudio Agostinelli , Elena Sabattini , Nicola Pimpinelli , Mauro Truni , Brunangelo Falini , Lorenzo Cerroni , Giovanna Talarico , Rossana Piccioni , Stefano Amente , Valentina Indio , Giuseppe Tarantino , Francesco Brundu , Marco Paulli , Emilio Berti , Fabio Facchetti , Gaetano Ivan Dellino , Francesco Bertolini , Claudio Tripodo , Raul Rabadan , Stefano A Pileri

Epigenetics and immune cells in medulloblastoma.

Frontiers in genetics

Avec: Francesca Gorini , Marco Miceli , Pasqualino de Antonellis , Stefano Amente , Massimo Zollo , Veronica Ferrucci

Genome-wide mapping of genomic DNA damage: methods and implications.

Cellular and molecular life sciences : CMLS

Avec: Stefano Amente , Giovanni Scala , Barbara Majello , Somaiyeh Azmoun , Helen G Tempest , Sanjay Premi , Marcus S Cooke

Identification of

Genes

Avec: Valeria Lucci , Elena De Marino , Daniela Tagliaferri , Stefano Amente , Alessandra Pollice , Viola Calabrò , Maria Vivo , Geppino Falco , Tiziana Angrisano

OxiDIP-Seq for Genome-wide Mapping of Damaged DNA Containing 8-Oxo-2'-Deoxyguanosine.

Bio-protocol

Avec: Francesca Gorini , Giovanni Scala , Susanna Ambrosio , Barbara Majello , Stefano Amente

Towards a comprehensive view of 8-oxo-7,8-dihydro-2'-deoxyguanosine: Highlighting the intertwined roles of DNA damage and epigenetics in genomic instability.

DNA repair

Avec: Francesca Gorini , Giovanni Scala , Marcus S Cooke , Barbara Majello , Stefano Amente

Genome-wide mapping of 8-oxo-7,8-dihydro-2'-deoxyguanosine reveals accumulation of oxidatively-generated damage at DNA replication origins within transcribed long genes of mammalian cells.

Nucleic acids research

Avec: Stefano Amente , Giacomo Di Palo , Giovanni Scala , Tiziana Castrignanò , Francesca Gorini , Sergio Cocozza , Angela Moresano , Piero Pucci , Bin Ma , Irina Stepanov , Luigi Lania , Pier Giuseppe Pelicci , Gaetano Ivan Dellino , Barbara Majello

Development of a multi-targeted chemotherapeutic approach based on G-quadruplex stabilisation and carbonic anhydrase inhibition.

Journal of enzyme inhibition and medicinal chemistry

Avec: Alessio Nocentini , Anna Di Porzio , Alessandro Bonardi , Carla Bazzicalupi , Andrea Petreni , Tarita Biver , Silvia Bua , Simona Marzano , Jussara Amato , Bruno Pagano , Nunzia Iaccarino , Stefano De Tito , Stefano Amente , Claudiu T Supuran , Antonio Randazzo , Paola Gratteri

The Intertwined Role of 8-oxodG and G4 in Transcription Regulation.

International journal of molecular sciences

Avec: Francesca Gorini , Susanna Ambrosio , Luigi Lania , Barbara Majello , Stefano Amente

Downregulation of praja2 restrains endocytosis and boosts tyrosine kinase receptors in kidney cancer.

Communications biology

Avec: Laura Rinaldi , Francesco Chiuso , Emanuela Senatore , Domenica Borzacchiello , Luca Lignitto , Rosa Iannucci , Rossella Delle Donne , Mariano Fuggi , Carla Reale , Filomena Russo , Nicola Antonino Russo , Giorgio Giurato , Francesca Rizzo , Assunta Sellitto , Michele Santangelo , Davide De Biase , Orlando Paciello , Chiara D'Ambrosio , Stefano Amente , Corrado Garbi , Emiliano Dalla , Andrea Scaloni , Alessandro Weisz , Concetta Ambrosino , Luigi Insabato , Antonio Feliciello

The genomic landscape of 8-oxodG reveals enrichment at specific inherently fragile promoters.

Nucleic acids research

Avec: Francesca Gorini , Giovanni Scala , Giacomo Di Palo , Gaetano Ivan Dellino , Sergio Cocozza , Pier Giuseppe Pelicci , Luigi Lania , Barbara Majello , Stefano Amente

Expanding the Role of the Histone Lysine-Specific Demethylase LSD1 in Cancer.

Cancers

Avec: Barbara Majello , Francesca Gorini , Carmen Daniela Saccà , Stefano Amente

ELIXIR-IT HPC@CINECA: high performance computing resources for the bioinformatics community.

BMC bioinformatics

Avec: Tiziana Castrignanò , Silvia Gioiosa , Tiziano Flati , Mirko Cestari , Ernesto Picardi , Matteo Chiara , Maddalena Fratelli , Stefano Amente , Marco Cirilli , Marco Antonio Tangaro , Giovanni Chillemi , Graziano Pesole , Federico Zambelli

8-oxodG accumulation within super-enhancers marks fragile CTCF-mediated chromatin loops.

Nucleic acids research

Avec: Giovanni Scala , Francesca Gorini , Susanna Ambrosio , Andrea M Chiariello , Mario Nicodemi , Luigi Lania , Barbara Majello , Stefano Amente

Accumulation of 8-oxodG within the human mitochondrial genome positively associates with transcription.

NAR genomics and bioinformatics

Avec: Giovanni Scala , Susanna Ambrosio , Margherita Menna , Francesca Gorini , Carmen Caiazza , Marcus S Cooke , Barbara Majello , Stefano Amente

MC profiling: a novel approach to analyze DNA methylation heterogeneity in genome-wide bisulfite sequencing data.

NAR genomics and bioinformatics

Avec: Giulia De Riso , Antonella Sarnataro , Giovanni Scala , Mariella Cuomo , Rosa Della Monica , Stefano Amente , Lorenzo Chiariotti , Gennaro Miele , Sergio Cocozza

Targeting ATP2B1 impairs PI3K/Akt/FOXO signaling and reduces SARS-COV-2 infection and replication.

EMBO reports

Avec: Pasqualino de Antonellis , Veronica Ferrucci , Marco Miceli , Francesca Bibbo , Fatemeh Asadzadeh , Francesca Gorini , Alessia Mattivi , Angelo Boccia , Roberta Russo , Immacolata Andolfo , Vito Alessandro Lasorsa , Sueva Cantalupo , Giovanna Fusco , Maurizio Viscardi , Sergio Brandi , Pellegrino Cerino , Vittoria Monaco , Dong-Rac Choi , Jae-Ho Cheong , Achille Iolascon , Stefano Amente , Maria Monti , Luca L Fava , Mario Capasso , Hong-Yeoul Kim , Massimo Zollo

Réseau de co-auteurs

Barbara Majello 11 collaborations

Francesca Gorini 11 collaborations

Giovanni Scala 9 collaborations

Susanna Ambrosio 5 collaborations

Luigi Lania 5 collaborations

Sergio Cocozza 4 collaborations

Gaetano Ivan Dellino 3 collaborations

Marcus S Cooke 3 collaborations

Antonella Sarnataro 2 collaborations

Giulia De Riso 2 collaborations

Marco Miceli 2 collaborations

Pasqualino de Antonellis 2 collaborations

Massimo Zollo 2 collaborations

Veronica Ferrucci 2 collaborations

Giacomo Di Palo 2 collaborations

Tiziana Castrignanò 2 collaborations

Pier Giuseppe Pelicci 2 collaborations

Antonio Pezone 1 collaboration

Carmen D Saccà 1 collaboration

Deriggio Faicchia 1 collaboration

Giuseppe Matarese 1 collaboration

Maria Rosaria Sapienza 1 collaboration

Francesco Abate 1 collaboration

Federica Melle 1 collaboration

Stefania Orecchioni 1 collaboration

Fabio Fuligni 1 collaboration

Maryam Etebari 1 collaboration

Valentina Tabanelli 1 collaboration

Maria Antonella Laginestra 1 collaboration

Alessandro Pileri 1 collaboration

Giovanna Motta 1 collaboration

Maura Rossi 1 collaboration

Claudio Agostinelli 1 collaboration

Elena Sabattini 1 collaboration

Nicola Pimpinelli 1 collaboration

Mauro Truni 1 collaboration

Brunangelo Falini 1 collaboration

Lorenzo Cerroni 1 collaboration

Giovanna Talarico 1 collaboration

Rossana Piccioni 1 collaboration

Valentina Indio 1 collaboration

Giuseppe Tarantino 1 collaboration

Francesco Brundu 1 collaboration

Marco Paulli 1 collaboration

Emilio Berti 1 collaboration

Fabio Facchetti 1 collaboration

Francesco Bertolini 1 collaboration

Claudio Tripodo 1 collaboration

Raul Rabadan 1 collaboration

Stefano A Pileri 1 collaboration

Somaiyeh Azmoun 1 collaboration

Helen G Tempest 1 collaboration

Sanjay Premi 1 collaboration

Valeria Lucci 1 collaboration

Elena De Marino 1 collaboration

Daniela Tagliaferri 1 collaboration

Alessandra Pollice 1 collaboration

Viola Calabrò 1 collaboration

Maria Vivo 1 collaboration

Geppino Falco 1 collaboration

Tiziana Angrisano 1 collaboration

Angela Moresano 1 collaboration

Piero Pucci 1 collaboration

Bin Ma 1 collaboration

Irina Stepanov 1 collaboration

Alessio Nocentini 1 collaboration

Anna Di Porzio 1 collaboration

Alessandro Bonardi 1 collaboration

Carla Bazzicalupi 1 collaboration

Andrea Petreni 1 collaboration

Tarita Biver 1 collaboration

Silvia Bua 1 collaboration

Simona Marzano 1 collaboration

Jussara Amato 1 collaboration

Bruno Pagano 1 collaboration

Nunzia Iaccarino 1 collaboration

Stefano De Tito 1 collaboration

Claudiu T Supuran 1 collaboration

Antonio Randazzo 1 collaboration

Paola Gratteri 1 collaboration

Laura Rinaldi 1 collaboration

Francesco Chiuso 1 collaboration

Emanuela Senatore 1 collaboration

Domenica Borzacchiello 1 collaboration

Luca Lignitto 1 collaboration

Rosa Iannucci 1 collaboration

Rossella Delle Donne 1 collaboration

Mariano Fuggi 1 collaboration

Carla Reale 1 collaboration

Filomena Russo 1 collaboration

Nicola Antonino Russo 1 collaboration

Giorgio Giurato 1 collaboration

Francesca Rizzo 1 collaboration

Assunta Sellitto 1 collaboration

Michele Santangelo 1 collaboration

Davide De Biase 1 collaboration

Orlando Paciello 1 collaboration

Chiara D'Ambrosio 1 collaboration

Corrado Garbi 1 collaboration

Emiliano Dalla 1 collaboration

Andrea Scaloni 1 collaboration

Alessandro Weisz 1 collaboration

Concetta Ambrosino 1 collaboration

Luigi Insabato 1 collaboration

Antonio Feliciello 1 collaboration

Carmen Daniela Saccà 1 collaboration

Silvia Gioiosa 1 collaboration

Tiziano Flati 1 collaboration

Mirko Cestari 1 collaboration

Ernesto Picardi 1 collaboration

Matteo Chiara 1 collaboration

Maddalena Fratelli 1 collaboration

Marco Cirilli 1 collaboration

Marco Antonio Tangaro 1 collaboration

Giovanni Chillemi 1 collaboration

Graziano Pesole 1 collaboration

Federico Zambelli 1 collaboration

Andrea M Chiariello 1 collaboration

Mario Nicodemi 1 collaboration

Margherita Menna 1 collaboration

Carmen Caiazza 1 collaboration

Mariella Cuomo 1 collaboration

Rosa Della Monica 1 collaboration

Lorenzo Chiariotti 1 collaboration

Gennaro Miele 1 collaboration

Francesca Bibbo 1 collaboration

Fatemeh Asadzadeh 1 collaboration

Alessia Mattivi 1 collaboration

Angelo Boccia 1 collaboration

Roberta Russo 1 collaboration

Immacolata Andolfo 1 collaboration

Vito Alessandro Lasorsa 1 collaboration

Sueva Cantalupo 1 collaboration

Giovanna Fusco 1 collaboration

Maurizio Viscardi 1 collaboration

Sergio Brandi 1 collaboration

Pellegrino Cerino 1 collaboration

Vittoria Monaco 1 collaboration

Dong-Rac Choi 1 collaboration

Jae-Ho Cheong 1 collaboration

Achille Iolascon 1 collaboration

Maria Monti 1 collaboration

Luca L Fava 1 collaboration

Mario Capasso 1 collaboration

Hong-Yeoul Kim 1 collaboration