Witold Kot

Affiliations

Department of Environmental Science, Aarhus University, Roskilde, Denmark.

Publications (18)

Targeting gut microbiota and barrier function with prebiotics to alleviate autoimmune manifestations in NOD mice.

Diabetologia

Avec: Camilla H F Hansen , Christian S Larsen , Henriette O Petersson , Line F Zachariassen , Andreas Vegge , Charlotte Lauridsen , Witold Kot , Łukasz Krych , Dennis S Nielsen , Axel K Hansen

Prebiotic Effect of Lycopene and Dark Chocolate on Gut Microbiome with Systemic Changes in Liver Metabolism, Skeletal Muscles and Skin in Moderately Obese Persons.

BioMed research international

Avec: Maria Wiese , Yuriy Bashmakov , Natalia Chalyk , Dennis Sandris Nielsen , Łukasz Krych , Witold Kot , Victor Klochkov , Dmitry Pristensky , Tatyana Bandaletova , Marina Chernyshova , Nigel Kyle , Ivan Petyaev

Isolation and characterization of bacteriophages active against methicillin-resistant Staphylococcus pseudintermedius.

Research in veterinary science

Avec: Arshnee Moodley , Witold Kot , Sofia Nälgård , Dziuginta Jakociune , Horst Neve , Lars Hestbjerg Hansen , Luca Guardabassi , Finn K Vogensen

Exploring the Remarkable Diversity of Culturable

Viruses

Avec: Nikoline S Olsen , Laura Forero-Junco , Witold Kot , Lars H Hansen

Detection of preQ0 deazaguanine modifications in bacteriophage CAjan DNA using Nanopore sequencing reveals same hypermodification at two distinct DNA motifs.

Nucleic acids research

Avec: Witold Kot , Nikoline S Olsen , Tue K Nielsen , Geoffrey Hutinet , Valérie de Crécy-Lagard , Liang Cui , Peter C Dedon , Alexander B Carstens , Sylvain Moineau , Manal A Swairjo , Lars H Hansen

High throughput in vitro characterization of pectins for pig(let) nutrition.

Animal microbiome

Avec: Maria Wiese , Yan Hui , Jesper Holck , Jimmy J P Sejberg , Celia Daures , Evy Maas , Witold Kot , Johanna M Borné , Bekzod Khakimov , Thomas Thymann , Dennis Sandris Nielsen

From Alpha Diversity to Zzz: Interactions among sleep, the brain, and gut microbiota in the first year of life.

Progress in neurobiology

Avec: S F Schoch , J L Castro-Mejía , L Krych , B Leng , W Kot , M Kohler , R Huber , G Rogler , L Biedermann , J C Walser , D S Nielsen , S Kurth

Salmonella phage akira, infecting selected Salmonella enterica Enteritidis and Typhimurium strains, represents a new lineage of bacteriophages.

Archives of virology

Avec: Nikoline S Olsen , René Lametsch , Natalia Wagner , Lars Hestbjerg Hansen , Witold Kot

Randomised, Placebo-Controlled Investigation of the Impact of Probiotic Consumption on Gut Microbiota Diversity and the Faecal Metabolome in Seniors.

Microorganisms

Avec: Gabriella C van Zanten , Anne Lundager Madsen , Christian C Yde , Lukasz Krych , Nicolas Yeung , Markku T Saarinen , Witold Kot , Henrik Max Jensen , Morten A Rasmussen , Arthur C Ouwehand , Dennis S Nielsen

A novel Queuovirinae lineage of Pseudomonas aeruginosa phages encode dPreQ0 DNA modifications with a single GA motif that provide restriction and CRISPR Cas9 protection in vitro.

Nucleic acids research

Avec: Nikoline S Olsen , Tue K Nielsen , Liang Cui , Peter Dedon , Horst Neve , Lars H Hansen , Witold Kot

Insights into the circular: The cryptic plasmidome and its derived antibiotic resistome in the urban water systems.

Environment international

Avec: Zhuofeng Yu , Wanli He , Franziska Klincke , Jonas Stenløkke Madsen , Witold Kot , Lars Hestbjerg Hansen , Marcos Quintela-Baluja , Sabela Balboa , Arnaud Dechesne , Barth Smets , Joseph Nesme , Søren Johannes Sørensen

Severe gut microbiota dysbiosis caused by malnourishment can be partly restored during 3 weeks of refeeding with fortified corn-soy-blend in a piglet model of childhood malnutrition.

BMC microbiology

Avec: Bingfeng Leng , Maria B Sørensen , Witold Kot , Thomas Thymann , Lukasz Krych , Dennis S Nielsen

Short communication: Gut microbial colonization of the mouse colon using faecal transfer was equally effective when comparing rectal inoculation and oral inoculation based on 16S rRNA sequencing.

Research in veterinary science

Avec: Ditte Olsen Lützhøft , Lidia Sánchez-Alcoholado , Peter Tougaard , Caroline M Junker Mentzel , Witold Kot , Dennis S Nielsen , Axel Kornerup Hansen

7-Deazaguanine modifications protect phage DNA from host restriction systems.

Nature communications

Avec: Geoffrey Hutinet , Witold Kot , Liang Cui , Roman Hillebrand , Seetharamsingh Balamkundu , Shanmugavel Gnanakalai , Ramesh Neelakandan , Alexander B Carstens , Chuan Fa Lui , Denise Tremblay , Deborah Jacobs-Sera , Mandana Sassanfar , Yan-Jiun Lee , Peter Weigele , Sylvain Moineau , Graham F Hatfull , Peter C Dedon , Lars H Hansen , Valérie de Crécy-Lagard

A novel six-phage cocktail reduces Pectobacterium atrosepticum soft rot infection in potato tubers under simulated storage conditions.

FEMS microbiology letters

Avec: Alexander Byth Carstens , Amaru Miranda Djurhuus , Witold Kot , Lars Hestbjerg Hansen

Cesarean Section Induces Microbiota-Regulated Immune Disturbances in C57BL/6 Mice.

Journal of immunology (Baltimore, Md. : 1950)

Avec: Line Fisker Zachariassen , Lukasz Krych , Sara Hansborg Rasmussen , Dennis Sandris Nielsen , Witold Kot , Thomas Lindebo Holm , Axel Kornerup Hansen , Camilla Hartmann Friis Hansen

Physical fitness in community-dwelling older adults is linked to dietary intake, gut microbiota, and metabolomic signatures.

Aging cell

Avec: Josué L Castro-Mejía , Bekzod Khakimov , Łukasz Krych , Jacob Bülow , Rasmus L Bechshøft , Grith Højfeldt , Kenneth H Mertz , Eva Stahl Garne , Simon R Schacht , Hajar F Ahmad , Witold Kot , Lars H Hansen , Federico J A Perez-Cueto , Mads V Lind , Aske J Lassen , Inge Tetens , Tenna Jensen , Søren Reitelseder , Astrid P Jespersen , Lars Holm , Søren B Engelsen , Dennis S Nielsen

Housing temperature influences exercise training adaptations in mice.

Nature communications

Avec: Steffen H Raun , Carlos Henriquez-Olguín , Iuliia Karavaeva , Mona Ali , Lisbeth L V Møller , Witold Kot , Josué L Castro-Mejía , Dennis Sandris Nielsen , Zachary Gerhart-Hines , Erik A Richter , Lykke Sylow

Réseau de co-auteurs

Dennis S Nielsen 5 collaborations

Lars H Hansen 5 collaborations

Dennis Sandris Nielsen 4 collaborations

Lars Hestbjerg Hansen 4 collaborations

Nikoline S Olsen 4 collaborations

Łukasz Krych 3 collaborations

Liang Cui 3 collaborations

Lukasz Krych 3 collaborations

Maria Wiese 2 collaborations

Horst Neve 2 collaborations

Tue K Nielsen 2 collaborations

Geoffrey Hutinet 2 collaborations

Valérie de Crécy-Lagard 2 collaborations

Peter C Dedon 2 collaborations

Alexander B Carstens 2 collaborations

Sylvain Moineau 2 collaborations

Bekzod Khakimov 2 collaborations

Thomas Thymann 2 collaborations

Axel Kornerup Hansen 2 collaborations

Josué L Castro-Mejía 2 collaborations

Camilla H F Hansen 1 collaboration

Christian S Larsen 1 collaboration

Henriette O Petersson 1 collaboration

Line F Zachariassen 1 collaboration

Andreas Vegge 1 collaboration

Charlotte Lauridsen 1 collaboration

Axel K Hansen 1 collaboration

Yuriy Bashmakov 1 collaboration

Natalia Chalyk 1 collaboration

Victor Klochkov 1 collaboration

Dmitry Pristensky 1 collaboration

Tatyana Bandaletova 1 collaboration

Marina Chernyshova 1 collaboration

Nigel Kyle 1 collaboration

Ivan Petyaev 1 collaboration

Arshnee Moodley 1 collaboration

Sofia Nälgård 1 collaboration

Dziuginta Jakociune 1 collaboration

Luca Guardabassi 1 collaboration

Finn K Vogensen 1 collaboration

Laura Forero-Junco 1 collaboration

Manal A Swairjo 1 collaboration

Yan Hui 1 collaboration

Jesper Holck 1 collaboration

Jimmy J P Sejberg 1 collaboration

Celia Daures 1 collaboration

Evy Maas 1 collaboration

Johanna M Borné 1 collaboration

S F Schoch 1 collaboration

J L Castro-Mejía 1 collaboration

L Krych 1 collaboration

B Leng 1 collaboration

W Kot 1 collaboration

M Kohler 1 collaboration

R Huber 1 collaboration

G Rogler 1 collaboration

L Biedermann 1 collaboration

J C Walser 1 collaboration

D S Nielsen 1 collaboration

S Kurth 1 collaboration

René Lametsch 1 collaboration

Natalia Wagner 1 collaboration

Gabriella C van Zanten 1 collaboration

Anne Lundager Madsen 1 collaboration

Christian C Yde 1 collaboration

Nicolas Yeung 1 collaboration

Markku T Saarinen 1 collaboration

Henrik Max Jensen 1 collaboration

Morten A Rasmussen 1 collaboration

Arthur C Ouwehand 1 collaboration

Peter Dedon 1 collaboration

Zhuofeng Yu 1 collaboration

Wanli He 1 collaboration

Franziska Klincke 1 collaboration

Jonas Stenløkke Madsen 1 collaboration

Marcos Quintela-Baluja 1 collaboration

Sabela Balboa 1 collaboration

Arnaud Dechesne 1 collaboration

Barth Smets 1 collaboration

Joseph Nesme 1 collaboration

Søren Johannes Sørensen 1 collaboration

Bingfeng Leng 1 collaboration

Maria B Sørensen 1 collaboration

Ditte Olsen Lützhøft 1 collaboration

Lidia Sánchez-Alcoholado 1 collaboration

Peter Tougaard 1 collaboration

Caroline M Junker Mentzel 1 collaboration

Roman Hillebrand 1 collaboration

Seetharamsingh Balamkundu 1 collaboration

Shanmugavel Gnanakalai 1 collaboration

Ramesh Neelakandan 1 collaboration

Chuan Fa Lui 1 collaboration

Denise Tremblay 1 collaboration

Deborah Jacobs-Sera 1 collaboration

Mandana Sassanfar 1 collaboration

Yan-Jiun Lee 1 collaboration

Peter Weigele 1 collaboration

Graham F Hatfull 1 collaboration

Alexander Byth Carstens 1 collaboration

Amaru Miranda Djurhuus 1 collaboration

Line Fisker Zachariassen 1 collaboration

Sara Hansborg Rasmussen 1 collaboration

Thomas Lindebo Holm 1 collaboration

Camilla Hartmann Friis Hansen 1 collaboration

Jacob Bülow 1 collaboration

Rasmus L Bechshøft 1 collaboration

Grith Højfeldt 1 collaboration

Kenneth H Mertz 1 collaboration

Eva Stahl Garne 1 collaboration

Simon R Schacht 1 collaboration

Hajar F Ahmad 1 collaboration

Federico J A Perez-Cueto 1 collaboration

Mads V Lind 1 collaboration

Aske J Lassen 1 collaboration

Inge Tetens 1 collaboration

Tenna Jensen 1 collaboration

Søren Reitelseder 1 collaboration

Astrid P Jespersen 1 collaboration

Lars Holm 1 collaboration

Søren B Engelsen 1 collaboration

Steffen H Raun 1 collaboration

Carlos Henriquez-Olguín 1 collaboration

Iuliia Karavaeva 1 collaboration

Mona Ali 1 collaboration

Lisbeth L V Møller 1 collaboration

Zachary Gerhart-Hines 1 collaboration

Erik A Richter 1 collaboration

Lykke Sylow 1 collaboration