The genome assembly of asparagus bean, Vigna unguiculata ssp. sesquipedialis.
Journal
Scientific data
ISSN: 2052-4463
Titre abrégé: Sci Data
Pays: England
ID NLM: 101640192
Informations de publication
Date de publication:
17 07 2019
17 07 2019
Historique:
received:
11
01
2019
accepted:
18
06
2019
entrez:
19
7
2019
pubmed:
19
7
2019
medline:
18
8
2020
Statut:
epublish
Résumé
Asparagus bean (Vigna. unguiculata ssp. sesquipedialis), known for its very long and tender green pods, is an important vegetable crop broadly grown in the developing Asian countries. In this study, we reported a 632.8 Mb assembly (549.81 Mb non-N size) of asparagus bean based on the whole genome shotgun sequencing strategy. We also generated a linkage map for asparagus bean, which helped anchor 94.42% of the scaffolds into 11 pseudo-chromosomes. A total of 42,609 protein-coding genes and 3,579 non-protein-coding genes were predicted from the assembly. Taken together, these genomic resources of asparagus bean will help develop a pan-genome of V. unguiculata and facilitate the investigation of economically valuable traits in this species, so that the cultivation of this plant would help combat the protein and energy malnutrition in the developing world.
Identifiants
pubmed: 31316072
doi: 10.1038/s41597-019-0130-6
pii: 10.1038/s41597-019-0130-6
pmc: PMC6638192
doi:
Substances chimiques
DNA Transposable Elements
0
Types de publication
Dataset
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
124Subventions
Organisme : National Natural Science Foundation of China (National Science Foundation of China)
ID : NO.31501369
Pays : International
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