Paraburkholderia guartelaensis sp. nov., a nitrogen-fixing species isolated from nodules of Mimosa gymnas in an ecotone considered as a hotspot of biodiversity in Brazil.
Base Composition
Brazil
Burkholderiaceae
/ classification
DNA, Bacterial
/ chemistry
Genes, Bacterial
/ genetics
Mimosa
/ microbiology
Multilocus Sequence Typing
Nitrogen Fixation
Nucleic Acid Hybridization
Phylogeny
RNA, Ribosomal, 16S
/ genetics
Root Nodules, Plant
/ microbiology
Sequence Analysis, DNA
Species Specificity
ANI
Biological nitrogen fixation
MLSA
Nodulation
dDDH
Journal
Archives of microbiology
ISSN: 1432-072X
Titre abrégé: Arch Microbiol
Pays: Germany
ID NLM: 0410427
Informations de publication
Date de publication:
Dec 2019
Dec 2019
Historique:
received:
05
04
2019
accepted:
10
08
2019
revised:
14
07
2019
pubmed:
21
8
2019
medline:
16
11
2019
entrez:
21
8
2019
Statut:
ppublish
Résumé
A polyphasic approach was used to infer the phylogenetic position of six nitrogen-fixing symbiotic bacteria isolated from Mimosa gymnas nodules grown in an ecotone between the Brazilian biomes of Atlantic Forest and Cerrado, considered as a hotspot of biodiversity. The 16S rRNA gene phylogeny indicated the highest similarity with Paraburkholderia oxyphila (98.7-98.9%), but similar values were found with other Paraburkholderia species. The multilocus sequence analysis (MLSA) of five (recA, gyrB, trpB, gltB, and atpD) housekeeping genes indicated that the CNPSo strains represent a novel lineage, sharing less than 95.7% of nucleotide identity (NI) with other Paraburkholderia species, being more closely related to P. nodosa. Genome parameters were analyzed for strain CNPSo 3008
Identifiants
pubmed: 31428824
doi: 10.1007/s00203-019-01714-z
pii: 10.1007/s00203-019-01714-z
doi:
Substances chimiques
DNA, Bacterial
0
RNA, Ribosomal, 16S
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
1435-1446Subventions
Organisme : INCT-Plant-Growth Promoting Microorganisms for Agricultural Sustainability and Environmental Responsibility
ID : CNPq 465133/2014-2, Fundação Araucária-STI, CAPES
Organisme : Empresa Brasileira de Pesquisa Agropecuária
ID : 02.13.08.001.00.00
Organisme : Conselho Nacional de Desenvolvimento Científico e Tecnológico
ID : 400468/2016-6