Diversity and Host Specificity Revealed by Biological Characterization and Whole Genome Sequencing of Bacteriophages Infecting

British Columbia DNA, Viral / genetics Genetic Variation Genome, Viral Genomics Geography Host Specificity Phylogeny Salmonella Phages / classification Salmonella enterica / virology Sequence Analysis, DNA Virulence Whole Genome Sequencing
Bacteriophage Salmonella biocontrol comparative genomics phage diversity

Journal

Viruses
ISSN: 1999-4915
Titre abrégé: Viruses
Pays: Switzerland
ID NLM: 101509722

Informations de publication

Date de publication:
14 09 2019
Historique:
received: 02 08 2019
revised: 05 09 2019
accepted: 05 09 2019
entrez: 22 9 2019
pubmed: 22 9 2019
medline: 29 9 2020
Statut: epublish

Résumé

Phages infecting members of the opportunistic human pathogen,

Identifiants

DOI: 10.3390/v11090854 PMID: 31540091 PMC: PMC6783827
pubmed: 31540091
pii: v11090854
doi: 10.3390/v11090854
pmc: PMC6783827
pii:
doi:

Substances chimiques

DNA, Viral 0

Types de publication

Comparative Study Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Déclaration de conflit d'intérêts

The authors declare no conflict of interest. The funders had no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript, or in the decision to publish the results.

Références

Mol Biol Evol. 2018 Jun 1;35(6):1547-1549
pubmed: 29722887
Appl Microbiol. 1974 Oct;28(4):618-22
pubmed: 4609209
MBio. 2012 Sep 25;3(5):null
pubmed: 23015740
FEMS Microbiol Lett. 2009 Sep;298(2):249-54
pubmed: 19663916
Appl Environ Microbiol. 1994 Jun;60(6):1832-41
pubmed: 16349277
Epidemiol Infect. 1998 Feb;120(1):29-35
pubmed: 9528815
Expert Opin Drug Deliv. 2017 Aug;14(8):959-972
pubmed: 27776446
Virology. 2014 Nov;468-470:421-443
pubmed: 25240328
PLoS One. 2012;7(8):e43392
pubmed: 22927964
Appl Environ Microbiol. 1998 Nov;64(11):4128-33
pubmed: 9797256
FEMS Microbiol Rev. 2006 May;30(3):321-81
pubmed: 16594962
Front Microbiol. 2016 Apr 20;7:545
pubmed: 27148229
Viruses. 2017 Dec 24;10(1):
pubmed: 29295549
Appl Environ Microbiol. 2006 Jun;72(6):4338-46
pubmed: 16751549
BMC Genomics. 2013 Jul 17;14:481
pubmed: 23865498
Adv Appl Microbiol. 2014;89:135-83
pubmed: 25131402
Genome Announc. 2016 Nov 17;4(6):
pubmed: 27856572
Genome Res. 2007 Oct;17(10):1486-95
pubmed: 17785533
Virology. 2016 Sep;496:255-276
pubmed: 27372181
BMC Bioinformatics. 2013 Nov 06;14:317
pubmed: 24191891
Theor Popul Biol. 2002 Jun;61(4):471-80
pubmed: 12167366
Microbiology. 2013 Aug;159(Pt 8):1629-38
pubmed: 23676434
Elife. 2015 Apr 28;4:e06416
pubmed: 25919952
Bacteriophage. 2016 Aug 5;6(3):e1219441
pubmed: 27738556
Int J Food Microbiol. 2002 Apr 5;74(3):229-38
pubmed: 11981973
Appl Environ Microbiol. 2013 Mar;79(6):1956-68
pubmed: 23335772
Mol Microbiol. 1995 Oct;18(2):201-8
pubmed: 8709840
Appl Environ Microbiol. 2010 Mar;76(5):1623-32
pubmed: 20061452
J Food Prot. 2019 Jul;82(7):1191-1199
pubmed: 31233354
Appl Environ Microbiol. 2014 Aug;80(15):4470-80
pubmed: 24837394
Viruses. 2018 Apr 05;10(4):
pubmed: 29621199
BMC Genomics. 2014 Jun 21;15:505
pubmed: 24952762
Nat Commun. 2014 Jul 24;5:4498
pubmed: 25058116
Front Microbiol. 2016 Aug 12;7:1177
pubmed: 27570518
PLoS One. 2017 Jan 24;12(1):e0170734
pubmed: 28118395
BMC Genomics. 2008 Feb 08;9:75
pubmed: 18261238
J Bacteriol. 1998 Aug;180(16):4184-91
pubmed: 9696768
ISME J. 2017 Jul;11(7):1511-1520
pubmed: 28291233
Appl Microbiol Biotechnol. 2007 Sep;76(3):513-9
pubmed: 17554535
Sci Rep. 2016 Feb 19;6:21345
pubmed: 26892066
Bacteriophage. 2011 Jan;1(1):46-49
pubmed: 21687534
Emerg Infect Dis. 2011 Jan;17(1):7-15
pubmed: 21192848
Microbiol Mol Biol Rev. 2003 Mar;67(1):86-156, table of contents
pubmed: 12626685
Br Med J. 1943 Jul 31;2(4308):127-30
pubmed: 20784954
Antimicrob Agents Chemother. 2012 Feb;56(2):1019-30
pubmed: 22106224
Virology. 2014 May;456-457:171-8
pubmed: 24889236
Trends Microbiol. 2018 Mar;26(3):220-228
pubmed: 29033338
Clin Infect Dis. 2010 Mar 15;50(6):882-9
pubmed: 20158401
Nucleic Acids Res. 2004 Jan 02;32(1):11-6
pubmed: 14704338
Curr Microbiol. 2018 Feb;75(2):132-141
pubmed: 28929212
Front Microbiol. 2017 Jul 10;8:1283
pubmed: 28740489
Arch Virol. 2019 Mar;164(3):819-830
pubmed: 30673846
J Food Prot. 2016 Mar;79(3):361-8
pubmed: 26939645
Expert Rev Anti Infect Ther. 2012 May;10(5):533-5
pubmed: 22702317
Viruses. 2017 May 19;9(5):
pubmed: 28534829
Emerg Infect Dis. 2006 Mar;12(3):381-8
pubmed: 16704773
Nat Rev Microbiol. 2007 Oct;5(10):801-12
pubmed: 17853907
Front Microbiol. 2017 Nov 15;8:2193
pubmed: 29187834
Appl Environ Microbiol. 2019 Jul 1;85(14):
pubmed: 31053586
Arch Virol. 2018 Aug;163(8):2037-2046
pubmed: 30039318
FEMS Microbiol Lett. 2015 Jan;362(2):1-7
pubmed: 25670704
PLoS Pathog. 2015 Jun 11;11(6):e1004847
pubmed: 26066799
J Theor Biol. 2000 Jul 7;205(1):167-70
pubmed: 10860710
PLoS One. 2015 Mar 11;10(3):e0118557
pubmed: 25761060
Virus Genes. 2016 Feb;52(1):117-26
pubmed: 26757942
J Comput Biol. 2010 Nov;17(11):1519-33
pubmed: 20958248
Virus Res. 2016 Jul 15;220:179-92
pubmed: 27126773
Bacteriophage. 2011 Jan;1(1):31-45
pubmed: 21687533
PLoS One. 2012;7(7):e41247
pubmed: 22911766
Viruses. 2017 Apr 03;9(4):
pubmed: 28368359
Bioinformatics. 2011 Apr 1;27(7):1009-10
pubmed: 21278367
Methods Mol Biol. 2016;1476:177-85
pubmed: 27507341

Auteurs

Karen Fong (K)

Food, Nutrition and Health, The University of British Columbia, Vancouver, BC V6T 1Z4, Canada. karen.fong@ubc.ca.

Denise M Tremblay (DM)

Félix d'Hérelle Reference Center for Bacterial Viruses, Faculté de médecine dentaire, Université Laval, Québec City, QC G1V 0A6, Canada. sylvain.moineau@bcm.ulaval.ca.
Groupe de recherche en écologie buccale, Faculté de médecine dentaire, Université Laval, Québec City, QC G1V 0A6, Canada. sylvain.moineau@bcm.ulaval.ca.

Pascal Delaquis (P)

Agriculture and Agri-Food Canada, Summerland, BC V0H 1Z0, Canada. pascal.delaquis@canada.ca.

Lawrence Goodridge (L)

Food Science Department, University of Guelph, Guelph, ON N1G 2W1, Canada. lawrence.goodridge@mcgill.ca.

Roger C Levesque (RC)

Institut de biologie intégrative et des systèmes (IBIS), Université Laval, Quebec City, QC G1V 0A6, Canada. rclevesq@ibis.ulaval.ca.

Sylvain Moineau (S)

Félix d'Hérelle Reference Center for Bacterial Viruses, Faculté de médecine dentaire, Université Laval, Québec City, QC G1V 0A6, Canada. Sylvain.Moineau@bcm.ulaval.ca.
Groupe de recherche en écologie buccale, Faculté de médecine dentaire, Université Laval, Québec City, QC G1V 0A6, Canada. Sylvain.Moineau@bcm.ulaval.ca.
Département de biochimie, de microbiologie, et de bio-informatique, Faculté des sciences et de génie, Université Laval, Québec City, QC G1V 0A6, Canada. Sylvain.Moineau@bcm.ulaval.ca.

Curtis A Suttle (CA)

Departments of Earth, Ocean and Atmospheric Sciences, Microbiology and Immunology, and Botany, and the Institute for Oceans and Fisheries, The University of British Columbia, Vancouver, BC V6T 1Z4, Canada. suttle@science.ubc.ca.

Siyun Wang (S)

Food, Nutrition and Health, The University of British Columbia, Vancouver, BC V6T 1Z4, Canada. siyun.wang@ubc.ca.

Articles similaires

Comprehensive comparative analysis and development of molecular markers for Lasianthus species based on complete chloroplast genome sequences.

Yue Zhang, Meifang Song, Deying Tang et al.
1.00
Genome, Chloroplast Phylogeny Genetic Markers Base Composition High-Throughput Nucleotide Sequencing

Decoding the genomic terrain: functional insights into 14 chemosensory proteins in whitefly Bemisia tabaci Asia II-1.

M N Rudra Gouda, Sabtharishi Subramanian
1.00
Animals Hemiptera Insect Proteins Phylogeny Insecticides

Multiple NADPH-cytochrome P450 reductases from Lycoris radiata involved in Amaryllidaceae alkaloids biosynthesis.

Yuqing Wu, Yifeng Zhang, Haitong Fan et al.
1.00
Amaryllidaceae Alkaloids Lycoris NADPH-Ferrihemoprotein Reductase Gene Expression Regulation, Plant Plant Proteins

Fasciola hepatica and Fasciola hybrid form co-existence in yak from Tibet of China: application of rDNA internal transcribed spacer.

Wenqiang Tang, Yule Zhou, Leyi Li et al.
1.00
Animals Cattle Tibet Fasciola Fascioliasis

Classifications MeSH

questionsmedicales.fr › Régions géographiques › Amériques › Amérique du Nord › Canada › Colombie-Britannique › Diversity and Host Specificity Revealed by...
questionsmedicales.fr › Acides nucléiques, nucléotides et nucléosides › Acides nucléiques › ADN › ADN viral › Diversity and Host Specificity Revealed by...
questionsmedicales.fr › Phénomènes génétiques › Variation génétique › Diversity and Host Specificity Revealed by...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Génome microbien › Génome viral › Diversity and Host Specificity Revealed by...
questionsmedicales.fr › Disciplines des sciences naturelles › Disciplines des sciences biologiques › Biologie › Génétique › Génomique › Diversity and Host Specificity Revealed by...
questionsmedicales.fr › Disciplines des sciences naturelles › Sciences de la Terre › Géographie › Diversity and Host Specificity Revealed by...
questionsmedicales.fr › Phénomènes biologiques › Interactions hôte-microbes › Interactions hôte-pathogène › Spécificité d'hôte › Diversity and Host Specificity Revealed by...
questionsmedicales.fr › Sciences de l'information › Phylogenèse › Diversity and Host Specificity Revealed by...
questionsmedicales.fr › Virus › Bactériophages › Phages de Salmonella › Diversity and Host Specificity Revealed by...
questionsmedicales.fr › Bactéries › Proteobacteria › Gammaproteobacteria › Enterobacteriaceae › Salmonella › Salmonella enterica › Diversity and Host Specificity Revealed by...
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de séquence › Analyse de séquence d'ADN › Diversity and Host Specificity Revealed by...
questionsmedicales.fr › Phénomènes microbiologiques › Virulence › Diversity and Host Specificity Revealed by...
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de séquence › Analyse de séquence d'ADN › Séquençage du génome entier › Diversity and Host Specificity Revealed by...