Lignipirellula cremea gen. nov., sp. nov., a planctomycete isolated from wood particles in a brackish river estuary.

Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Estuaries Fatty Acids / analysis Phylogeny RNA, Ribosomal, 16S / genetics Rivers Sequence Analysis, DNA Wood / chemistry
Aquatic bacteria Baltic Sea Budding Pirellulaceae Planctomycetes Wood particles

Journal

Antonie van Leeuwenhoek
ISSN: 1572-9699
Titre abrégé: Antonie Van Leeuwenhoek
Pays: Netherlands
ID NLM: 0372625

Informations de publication

Date de publication:
Dec 2020
Historique:
received: 30 01 2020
accepted: 15 03 2020
pubmed: 3 4 2020
medline: 19 8 2021
entrez: 3 4 2020
Statut: ppublish

Résumé

A novel planctomycetal strain, designated Pla85_3_4

Identifiants

DOI: 10.1007/s10482-020-01407-4 PMID: 32239303 PMC: PMC7717058
pubmed: 32239303
doi: 10.1007/s10482-020-01407-4
pii: 10.1007/s10482-020-01407-4
pmc: PMC7717058
doi:

Substances chimiques

DNA, Bacterial 0
Fatty Acids 0
RNA, Ribosomal, 16S 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

1863-1875

Subventions

Organisme : DFG
ID : KA 4967/1-1
Organisme : DFG
ID : JO 893/4-1
Organisme : Nederlandse Organisatie voor Wetenschappelijk Onderzoek
ID : ALWOP.308
Organisme : Soehngen Institute for Anaerobic Microbiology
ID : 024002002

Références

Antonie Van Leeuwenhoek. 2020 Dec;113(12):1751-1766
pubmed: 31802338
Antonie Van Leeuwenhoek. 2020 Dec;113(12):1727-1736
pubmed: 31773447
Mol Microbiol. 2014 Nov;94(4):751-5
pubmed: 25287615
Annu Rev Microbiol. 2017 Sep 8;71:711-730
pubmed: 28731846
Nat Rev Microbiol. 2014 Sep;12(9):635-45
pubmed: 25118885
Front Microbiol. 2017 Feb 13;8:202
pubmed: 28243229
Appl Environ Microbiol. 2011 Aug 15;77(16):5826-9
pubmed: 21724885
J Bacteriol. 2008 May;190(9):3192-202
pubmed: 18310338
Proc Natl Acad Sci U S A. 2010 Jul 20;107(29):12883-8
pubmed: 20566852
Nat Rev Microbiol. 2011 Jun;9(6):403-13
pubmed: 21572457
Front Microbiol. 2016 Jun 16;7:914
pubmed: 27379046
Mol Biol Evol. 2000 Apr;17(4):540-52
pubmed: 10742046
BMC Bioinformatics. 2017 Nov 29;18(1):529
pubmed: 29187165
Int J Syst Evol Microbiol. 2016 Feb;66(2):1100-1103
pubmed: 26585518
BMC Bioinformatics. 2011 Apr 28;12:124
pubmed: 21526987
Curr Opin Chem Biol. 2019 Apr;49:45-52
pubmed: 30308437
Antonie Van Leeuwenhoek. 2013 Oct;104(4):477-88
pubmed: 23904187
Nat Commun. 2017 Apr 10;8:14853
pubmed: 28393831
Front Microbiol. 2016 Dec 06;7:1964
pubmed: 28018303
Syst Appl Microbiol. 2015 Feb;38(1):8-15
pubmed: 25487949
Database (Oxford). 2018 Jan 1;2018:
pubmed: 29718141
Mol Syst Biol. 2011 Oct 11;7:539
pubmed: 21988835
Syst Appl Microbiol. 2020 Jan;43(1):126022
pubmed: 31785948
ISME J. 2012 Dec;6(12):2188-98
pubmed: 22763650
Front Microbiol. 2016 Aug 19;7:1242
pubmed: 27594849
PLoS Biol. 2013;11(5):e1001565
pubmed: 23700385
J Cell Sci. 2014 Jan 15;127(Pt 2):277-80
pubmed: 24259664
Int J Syst Evol Microbiol. 2017 May;67(5):1571-1576
pubmed: 28036240
Bioinformatics. 2014 May 1;30(9):1312-3
pubmed: 24451623
Antonie Van Leeuwenhoek. 2020 Dec;113(12):1767-1778
pubmed: 31807932
FEMS Microbiol Ecol. 2017 Dec 1;93(12):
pubmed: 29126113
BMC Microbiol. 2010 Oct 15;10:261
pubmed: 20950420
Antonie Van Leeuwenhoek. 2020 Dec;113(12):1823-1837
pubmed: 31894496
Nat Commun. 2015 May 12;6:7116
pubmed: 25964217
Bioinformatics. 2012 Jul 15;28(14):1823-9
pubmed: 22556368
Trends Microbiol. 2014 Jan;22(1):14-20
pubmed: 24286661
Mol Microbiol. 2014 Nov;94(4):794-802
pubmed: 25287816
Antonie Van Leeuwenhoek. 2020 Dec;113(12):1811-1822
pubmed: 31894497
J Bacteriol. 2012 Dec;194(23):6419-30
pubmed: 23002222
Syst Appl Microbiol. 2015 Mar;38(2):120-7
pubmed: 25595869
Antonie Van Leeuwenhoek. 2013 Oct;104(4):551-67
pubmed: 23982431
Curr Opin Biotechnol. 2006 Jun;17(3):241-9
pubmed: 16704931
Antonie Van Leeuwenhoek. 2018 Jun;111(6):785-799
pubmed: 29058138
Front Microbiol. 2018 Jan 19;8:2709
pubmed: 29403454
Nucleic Acids Res. 2014 Apr;42(8):e73
pubmed: 24589583
Antonie Van Leeuwenhoek. 2013 Oct;104(4):443-9
pubmed: 24052364
Nat Commun. 2015 May 12;6:6878
pubmed: 25962786
Front Microbiol. 2017 Mar 29;8:472
pubmed: 28424662
Int J Syst Evol Microbiol. 2013 Jun;63(Pt 6):2314-2319
pubmed: 23159757
Front Microbiol. 2016 Dec 22;7:2079
pubmed: 28066393
FEMS Microbiol Rev. 2018 Nov 1;42(6):739-760
pubmed: 30052954
Front Microbiol. 2014 Jun 03;5:267
pubmed: 24917860
Antonie Van Leeuwenhoek. 2020 Dec;113(12):1779-1795
pubmed: 31853689
Nature. 1999 Jul 29;400(6743):446-9
pubmed: 10440372
Science. 2010 Nov 26;330(6008):1187-8
pubmed: 21109658
Genome Res. 2015 Jul;25(7):1043-55
pubmed: 25977477
J Bacteriol. 2014 Jun;196(12):2210-5
pubmed: 24706738
FEMS Microbiol Ecol. 2017 Mar 1;93(3):
pubmed: 28087803
Nat Microbiol. 2020 Jan;5(1):126-140
pubmed: 31740763
Nucleic Acids Res. 2017 Jul 3;45(W1):W36-W41
pubmed: 28460038
Antonie Van Leeuwenhoek. 2020 Dec;113(12):1797-1809
pubmed: 31894495
FEMS Microbiol Ecol. 2014 Jun;88(3):445-56
pubmed: 24266389
Antonie Van Leeuwenhoek. 2020 Dec;113(12):1737-1750
pubmed: 31802336
Front Microbiol. 2016 Aug 12;7:1241
pubmed: 27570520
FEMS Microbiol Ecol. 2013 May;84(2):411-20
pubmed: 23311942
Nucleic Acids Res. 2004 Mar 19;32(5):1792-7
pubmed: 15034147
Proc Natl Acad Sci U S A. 1991 Sep 15;88(18):8184-8
pubmed: 11607213
Proc Natl Acad Sci U S A. 2005 Feb 15;102(7):2567-72
pubmed: 15701695
Nucleic Acids Res. 2014 Jan;42(Database issue):D490-5
pubmed: 24270786

Auteurs

Stijn H Peeters (SH)

Department of Microbiology, Radboud Universiteit, Nijmegen, The Netherlands.

Sandra Wiegand (S)

Institute for Biological Interfaces 5, Karlsruhe Institute of Technology, Eggenstein-Leopoldshafen, Germany.

Nicolai Kallscheuer (N)

Department of Microbiology, Radboud Universiteit, Nijmegen, The Netherlands.

Mareike Jogler (M)

Department of Microbial Interactions, Institute of Microbiology, Friedrich Schiller University, Jena, Germany.

Anja Heuer (A)

Leibniz Institute DSMZ, Brunswick, Germany.

Mike S M Jetten (MSM)

Department of Microbiology, Radboud Universiteit, Nijmegen, The Netherlands.

Christian Boedeker (C)

Leibniz Institute DSMZ, Brunswick, Germany.

Manfred Rohde (M)

Central Facility for Microscopy, Helmholtz Centre for Infection Research, HZI, Brunswick, Germany.

Christian Jogler (C)

Department of Microbiology, Radboud Universiteit, Nijmegen, The Netherlands. christian.jogler@uni-jena.de.
Department of Microbial Interactions, Institute of Microbiology, Friedrich Schiller University, Jena, Germany. christian.jogler@uni-jena.de.

Articles similaires

Comprehensive comparative analysis and development of molecular markers for Lasianthus species based on complete chloroplast genome sequences.

Yue Zhang, Meifang Song, Deying Tang et al.
1.00
Genome, Chloroplast Phylogeny Genetic Markers Base Composition High-Throughput Nucleotide Sequencing

Decoding the genomic terrain: functional insights into 14 chemosensory proteins in whitefly Bemisia tabaci Asia II-1.

M N Rudra Gouda, Sabtharishi Subramanian
1.00
Animals Hemiptera Insect Proteins Phylogeny Insecticides

Multiple NADPH-cytochrome P450 reductases from Lycoris radiata involved in Amaryllidaceae alkaloids biosynthesis.

Yuqing Wu, Yifeng Zhang, Haitong Fan et al.
1.00
Amaryllidaceae Alkaloids Lycoris NADPH-Ferrihemoprotein Reductase Gene Expression Regulation, Plant Plant Proteins

Fasciola hepatica and Fasciola hybrid form co-existence in yak from Tibet of China: application of rDNA internal transcribed spacer.

Wenqiang Tang, Yule Zhou, Leyi Li et al.
1.00
Animals Cattle Tibet Fasciola Fascioliasis

Classifications MeSH

questionsmedicales.fr › Techniques d'investigation › Techniques de laboratoire clinique › Techniques microbiologiques › Techniques bactériologiques › Techniques de typage bactérien › Lignipirellula cremea gen. nov., sp. nov., a...
questionsmedicales.fr › Phénomènes chimiques › Phénomènes biochimiques › Composition en bases nucléiques › Lignipirellula cremea gen. nov., sp. nov., a...
questionsmedicales.fr › Acides nucléiques, nucléotides et nucléosides › Acides nucléiques › ADN › ADN bactérien › Lignipirellula cremea gen. nov., sp. nov., a...
questionsmedicales.fr › Phénomènes physiques › Phénomènes géologiques › Estuaires › Lignipirellula cremea gen. nov., sp. nov., a...
questionsmedicales.fr › Lipides › Acides gras › Lignipirellula cremea gen. nov., sp. nov., a...
questionsmedicales.fr › Sciences de l'information › Phylogenèse › Lignipirellula cremea gen. nov., sp. nov., a...
questionsmedicales.fr › Acides nucléiques, nucléotides et nucléosides › Acides nucléiques › ARN › ARN ribosomique › ARN ribosomique 16S › Lignipirellula cremea gen. nov., sp. nov., a...
questionsmedicales.fr › Environnement et santé publique › Environnement › Eau douce › Rivières › Lignipirellula cremea gen. nov., sp. nov., a...
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de séquence › Analyse de séquence d'ADN › Lignipirellula cremea gen. nov., sp. nov., a...
questionsmedicales.fr › Technologie, industrie et agriculture › Produits manufacturés › Matériaux de construction › Bois › Lignipirellula cremea gen. nov., sp. nov., a...