Genetic Architecture of Early Vigor Traits in Wild Soybean.

Asia Chromosome Mapping Genome-Wide Association Study / methods Linkage Disequilibrium Phenotype Plant Proteins / genetics Polymorphism, Single Nucleotide Quantitative Trait Loci Glycine max / genetics
GWAS Glycine soja early growth early vigor genome-wide association study wild soybean

Journal

International journal of molecular sciences
ISSN: 1422-0067
Titre abrégé: Int J Mol Sci
Pays: Switzerland
ID NLM: 101092791

Informations de publication

Date de publication:
28 Apr 2020
Historique:
received: 10 04 2020
accepted: 24 04 2020
entrez: 2 5 2020
pubmed: 2 5 2020
medline: 3 2 2021
Statut: epublish

Résumé

A worldwide food shortage has been projected as a result of the current increase in global population and climate change. In order to provide sufficient food to feed more people, we must develop crops that can produce higher yields. Plant early vigor traits, early growth rate (EGR), early plant height (EPH), inter-node length, and node count are important traits that are related to crop yield.

Identifiants

DOI: 10.3390/ijms21093105 PMID: 32354037 PMC: PMC7247153
pubmed: 32354037
pii: ijms21093105
doi: 10.3390/ijms21093105
pmc: PMC7247153
pii:
doi:

Substances chimiques

Plant Proteins 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : North Carolina Biotechnology Center
ID : 2014-CFG-8005
Organisme : NIGMS NIH HHS
ID : R15 GM122029
Pays : United States
Organisme : University of North Carolina at Charlotte
ID : Song_2020
Organisme : North Carolina Biotechnology Center
ID : 2019-BIG-6507
Organisme : NIH HHS
ID : R15GM122029
Pays : United States
Organisme : the North Carolina Soybean Producers Association
ID : 18-0252

Références

Theor Appl Genet. 2017 Sep;130(9):1941-1952
pubmed: 28710504
J Hered. 2009 Nov-Dec;100(6):798-801
pubmed: 19451208
Bioinformatics. 2007 Oct 1;23(19):2633-5
pubmed: 17586829
Plant Physiol. 2004 Feb;134(2):726-34
pubmed: 14730083
BMC Genomics. 2015 Feb 25;16:132
pubmed: 25765991
Proc Natl Acad Sci U S A. 2016 Feb 23;113(8):E1116-25
pubmed: 26862170
Am J Hum Genet. 2009 Feb;84(2):210-23
pubmed: 19200528
Proc Natl Acad Sci U S A. 2010 Dec 21;107(51):22032-7
pubmed: 21131573
Theor Appl Genet. 2006 Feb;112(4):665-73
pubmed: 16365761
BMC Genomics. 2015 Mar 20;16:217
pubmed: 25887991
Plant Cell. 2005 Jan;17(1):92-102
pubmed: 15608330
PLoS One. 2013;8(1):e54985
pubmed: 23372807
BMC Bioinformatics. 2009 Dec 14;10:415
pubmed: 20003414
Physiol Genomics. 2002 Jul 12;10(1):21-9
pubmed: 12118102
G3 (Bethesda). 2012 Nov;2(11):1405-13
pubmed: 23173092
Science. 2005 Apr 15;308(5720):385-9
pubmed: 15761122
Plant Physiol. 2003 Jun;132(2):718-25
pubmed: 12805600
Science. 2010 Feb 12;327(5967):818-22
pubmed: 20150489
Evol Appl. 2016 Dec 10;10(1):5-24
pubmed: 28035232
Plant J. 2015 Dec;84(6):1124-36
pubmed: 26561232
Genome Biol. 2011 Oct 28;12(10):232
pubmed: 22035733
Genet Epidemiol. 2007 Jul;31(5):365-75
pubmed: 17326099
Theor Appl Genet. 2007 Feb;114(3):461-72
pubmed: 17119912
BMC Genomics. 2017 Jan 5;18(1):18
pubmed: 28056769
Front Plant Sci. 2016 Aug 17;7:1214
pubmed: 27582748
Nat Commun. 2014 Jul 09;5:4340
pubmed: 25004933
Nat Biotechnol. 2014 Oct;32(10):1045-52
pubmed: 25218520
Front Plant Sci. 2018 Jul 09;9:949
pubmed: 30038633
J Plant Physiol. 2004 Feb;161(2):175-81
pubmed: 15022831
Breed Sci. 2012 Jan;61(5):445-52
pubmed: 23136484
Sci Rep. 2017 Aug 29;7(1):9699
pubmed: 28852059
BMC Genomics. 2013 Aug 28;14:579
pubmed: 23984715
G3 (Bethesda). 2016 Apr 07;6(4):835-43
pubmed: 26818076
Bioinformatics. 2005 Sep 15;21(18):3674-6
pubmed: 16081474
Bioinformatics. 2012 Sep 15;28(18):2397-9
pubmed: 22796960
Genesis. 2015 Aug;53(8):474-85
pubmed: 26201819
BMC Genomics. 2015 Sep 03;16:671
pubmed: 26334313
Genom Data. 2017 Aug 09;14:36-39
pubmed: 28856099
Plant Signal Behav. 2006 Sep;1(5):229-30
pubmed: 19704665
Theor Appl Genet. 2003 Feb;106(4):575-82
pubmed: 12595984
Nucleic Acids Res. 2012 Jan;40(Database issue):D1178-86
pubmed: 22110026
Front Plant Sci. 2016 Dec 09;7:1842
pubmed: 28018382
Plant Methods. 2013 Jul 22;9:29
pubmed: 23876160
BMC Genomics. 2010 Dec 22;11:724
pubmed: 21176216
New Phytol. 2017 Apr;214(2):539-553
pubmed: 28134435
J Exp Bot. 2009;60(13):3697-714
pubmed: 19567478
Nucleic Acids Res. 2010 Jan;38(Database issue):D843-6
pubmed: 20008513
PLoS One. 2011;6(12):e29229
pubmed: 22216221
Theor Appl Genet. 2004 Feb;108(3):458-67
pubmed: 14504749
Theor Appl Genet. 2017 Dec;130(12):2601-2615
pubmed: 28887657

Auteurs

Janice Kofsky (J)

Department of Biological Sciences, University of North Carolina at Charlotte, Charlotte, NC 28223, USA.

Hengyou Zhang (H)

Department of Biological Sciences, University of North Carolina at Charlotte, Charlotte, NC 28223, USA.
ORCID: 0000-0003-4103-8980

Bao-Hua Song (BH)

Department of Biological Sciences, University of North Carolina at Charlotte, Charlotte, NC 28223, USA.
ORCID: 0000-0003-3537-7783

Articles similaires

Multiple NADPH-cytochrome P450 reductases from Lycoris radiata involved in Amaryllidaceae alkaloids biosynthesis.

Yuqing Wu, Yifeng Zhang, Haitong Fan et al.
1.00
Amaryllidaceae Alkaloids Lycoris NADPH-Ferrihemoprotein Reductase Gene Expression Regulation, Plant Plant Proteins

Fasciola hepatica and Fasciola hybrid form co-existence in yak from Tibet of China: application of rDNA internal transcribed spacer.

Wenqiang Tang, Yule Zhou, Leyi Li et al.
1.00
Animals Cattle Tibet Fasciola Fascioliasis

Systematical characterization of Rab7 gene family in Gossypium and potential functions of GhRab7B3-A gene in drought tolerance.

Mengyuan Yan, Zhiwei Dong, Tian Pan et al.
1.00
Drought Resistance Gene Expression Profiling Gene Expression Regulation, Plant Gossypium Multigene Family

The causal effects of lifestyle, circulating, pigment, and metabolic factors on early age-related macular degeneration: a comprehensive Mendelian randomization study.

Gang Shen, Yaqiong Chen, Jiahao Chen et al.
1.00
Humans Macular Degeneration Mendelian Randomization Analysis Life Style Genome-Wide Association Study

Classifications MeSH

questionsmedicales.fr › Régions géographiques › Asie › Genetic Architecture of Early Vigor Traits in...
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Cartographie chromosomique › Genetic Architecture of Early Vigor Traits in...
questionsmedicales.fr › Environnement et santé publique › Santé publique › Méthodes épidémiologiques › Épidémiologie moléculaire › Étude d'association pangénomique › Genetic Architecture of Early Vigor Traits in...
questionsmedicales.fr › Phénomènes génétiques › Liaison génétique › Déséquilibre de liaison › Genetic Architecture of Early Vigor Traits in...
questionsmedicales.fr › Phénomènes génétiques › Phénotype › Genetic Architecture of Early Vigor Traits in...
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Protéines végétales › Genetic Architecture of Early Vigor Traits in...
questionsmedicales.fr › Phénomènes génétiques › Variation génétique › Polymorphisme génétique › Polymorphisme de nucléotide simple › Genetic Architecture of Early Vigor Traits in...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Composants de génome › Locus génétiques › Locus de caractère quantitatif › Genetic Architecture of Early Vigor Traits in...