A New Protocol for the Detection of Sterigmatocystin-producing Aspergillus Section Versicolores Using a High Discrimination Polymerase.
Aspergillus
/ genetics
Base Sequence
Calmodulin
/ genetics
Carcinogens
/ analysis
DNA, Fungal
/ genetics
DNA-Directed DNA Polymerase
/ genetics
Fungal Proteins
/ genetics
Gene Expression Regulation, Fungal
Polymerase Chain Reaction
/ methods
Polymorphism, Single Nucleotide
RNA Polymerase I
/ genetics
Sequence Alignment
Sterigmatocystin
/ analysis
Aspergillus section Versicolores
High discrimination polymerase
SNP-based PCR amplification
Journal
Biocontrol science
ISSN: 1884-0205
Titre abrégé: Biocontrol Sci
Pays: Japan
ID NLM: 9712121
Informations de publication
Date de publication:
2020
2020
Historique:
entrez:
9
6
2020
pubmed:
9
6
2020
medline:
13
4
2021
Statut:
ppublish
Résumé
Aspergillus section Versicolores species, except Aspergillus sydowii, produce a carcinogenic mycotoxin sterigmatocystin (STC). Since these fungi are found in varied environmental milieu including indoor dust and food products, our aim was to develop a sensitive and convenient assay to detect STC producing fungal strains. We made use of a high discrimination DNA polymerase (HiDi DNA polymerase), for single nucleotide polymorphism (SNP)-based PCR amplification. Using specific primer pairs based on the SNPs between A. sydowii and other strains of Aspergillus section Versicolores, we succeeded in amplifying the genomic DNA all target strains except A. sydowii. These results confirm that the SNP-based PCR amplification technique, using a high discrimination DNA polymerase, was a reliable and robust screening method for target fungal strains.
Substances chimiques
Calmodulin
0
Carcinogens
0
DNA, Fungal
0
Fungal Proteins
0
Sterigmatocystin
10048-13-2
RNA Polymerase I
EC 2.7.7.6
DNA-Directed DNA Polymerase
EC 2.7.7.7
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM